RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 GOLIM4O00461 696 aa25.14■■□□□ 1.62
CIRBP-246ENST00000628979 MAP3K12Q12852 859 aa25.14■■□□□ 1.62
CIRBP-246ENST00000628979 VGLL4Q14135 290 aa25.14■■□□□ 1.62
CIRBP-246ENST00000628979 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.14■■□□□ 1.62
CIRBP-246ENST00000628979 ZKSCAN4Q969J2 545 aaPredicted RBP25.14■■□□□ 1.62
CIRBP-246ENST00000628979 DDTLA6NHG4 134 aaPredicted RBP25.13■■□□□ 1.61
CIRBP-246ENST00000628979 TTF1Q15361 905 aaPredicted RBP25.13■■□□□ 1.61
CIRBP-246ENST00000628979 SH3BP5LQ7L8J4 393 aa25.13■■□□□ 1.61
CIRBP-246ENST00000628979 OPTNQ96CV9 577 aa25.13■■□□□ 1.61
CIRBP-246ENST00000628979 RFX7Q2KHR2 1363 aa25.13■■□□□ 1.61
CIRBP-246ENST00000628979 MAP4K4O95819 1239 aaPredicted RBP25.12■■□□□ 1.61
CIRBP-246ENST00000628979 ZBTB48P10074 688 aaPredicted RBP25.12■■□□□ 1.61
CIRBP-246ENST00000628979 GJA5P36382 358 aa25.12■■□□□ 1.61
CIRBP-246ENST00000628979 DYNLL1P63167 89 aaKnown RBP25.12■■□□□ 1.61
CIRBP-246ENST00000628979 SREBF2Q12772 1141 aa25.12■■□□□ 1.61
CIRBP-246ENST00000628979 MIGA1Q8NAN2 632 aa25.12■■□□□ 1.61
CIRBP-246ENST00000628979 CNKSR2Q8WXI2 1034 aa25.12■■□□□ 1.61
CIRBP-246ENST00000628979 EDC3Q96F86 508 aaKnown RBP25.12■■□□□ 1.61
CIRBP-246ENST00000628979 PRDM10Q9NQV6 1147 aa25.12■■□□□ 1.61
CIRBP-246ENST00000628979 PLCG2P16885 1265 aa25.11■■□□□ 1.61
CIRBP-246ENST00000628979 ATP5JP18859 108 aa25.11■■□□□ 1.61
CIRBP-246ENST00000628979 EXOC6Q8TAG9 804 aa25.11■■□□□ 1.61
CIRBP-246ENST00000628979 DOCK2Q92608 1830 aa25.1■■□□□ 1.61
CIRBP-246ENST00000628979 IGSF3O75054 1194 aa25.1■■□□□ 1.61
CIRBP-246ENST00000628979 INPP5BP32019 993 aa25.1■■□□□ 1.61
CIRBP-246ENST00000628979 TM4SF4P48230 202 aa25.1■■□□□ 1.61
CIRBP-246ENST00000628979 PPP4CP60510 307 aa25.1■■□□□ 1.61
CIRBP-246ENST00000628979 TGFBRAP1Q8WUH2 860 aa25.1■■□□□ 1.61
CIRBP-246ENST00000628979 PAG1Q9NWQ8 432 aa25.1■■□□□ 1.61
CIRBP-246ENST00000628979 MANSC4A6NHS7 340 aaPredicted RBP25.09■■□□□ 1.61
CIRBP-246ENST00000628979 SLURP2P0DP57 97 aa25.09■■□□□ 1.61
CIRBP-246ENST00000628979 OTUD5Q96G74 571 aa25.09■■□□□ 1.61
CIRBP-246ENST00000628979 OSBPL5Q9H0X9 879 aaPredicted RBP25.09■■□□□ 1.61
CIRBP-246ENST00000628979 SAGE1Q9NXZ1 904 aa25.09■■□□□ 1.61
CIRBP-246ENST00000628979 SNCAIPQ9Y6H5 919 aa25.09■■□□□ 1.61
CIRBP-246ENST00000628979 SLC9C2Q5TAH2 1124 aa25.08■■□□□ 1.61
CIRBP-246ENST00000628979 MAPKAPK5Q8IW41 473 aa25.08■■□□□ 1.61
CIRBP-246ENST00000628979 HAUS7Q99871 368 aa25.08■■□□□ 1.61
CIRBP-246ENST00000628979 ECHDC1Q9NTX5 307 aa25.08■■□□□ 1.61
CIRBP-246ENST00000628979 NPM3O75607 178 aaKnown RBP25.07■■□□□ 1.6
CIRBP-246ENST00000628979 TSHZ3Q63HK5 1081 aa25.07■■□□□ 1.6
CIRBP-246ENST00000628979 GPATCH3Q96I76 525 aa25.07■■□□□ 1.6
CIRBP-246ENST00000628979 ZBTB47Q9UFB7 747 aaPredicted RBP25.07■■□□□ 1.6
CIRBP-246ENST00000628979 TBC1D8O95759 1140 aa25.06■■□□□ 1.6
CIRBP-246ENST00000628979 PDE6AP16499 860 aa25.06■■□□□ 1.6
CIRBP-246ENST00000628979 TNS4Q8IZW8 715 aa25.06■■□□□ 1.6
CIRBP-246ENST00000628979 ZNF112Q9UJU3 913 aa25.06■■□□□ 1.6
CIRBP-246ENST00000628979 INHBEP58166 350 aa25.05■■□□□ 1.6
CIRBP-246ENST00000628979 IRX6P78412 446 aaPredicted RBP25.05■■□□□ 1.6
CIRBP-246ENST00000628979 AAMPQ13685 434 aa25.05■■□□□ 1.6
CIRBP-246ENST00000628979 ANKRD45Q5TZF3 282 aa25.05■■□□□ 1.6
CIRBP-246ENST00000628979 ERO1BQ86YB8 467 aa25.05■■□□□ 1.6
CIRBP-246ENST00000628979 CASP8AP2Q9UKL3 1982 aa25.05■■□□□ 1.6
CIRBP-246ENST00000628979 ZNF532Q9HCE3 1301 aa25.05■■□□□ 1.6
CIRBP-246ENST00000628979 ATRNL1Q5VV63 1379 aa25.05■■□□□ 1.6
CIRBP-246ENST00000628979 CDK5RAP2Q96SN8 1893 aa25.04■■□□□ 1.6
CIRBP-246ENST00000628979 MAGEB6P1A0A0J9YX57 407 aa25.04■■□□□ 1.6
CIRBP-246ENST00000628979 SPDYE5A6NIY4 337 aa25.04■■□□□ 1.6
CIRBP-246ENST00000628979 FAM196BA6NMK8 535 aa25.04■■□□□ 1.6
CIRBP-246ENST00000628979 USP5P45974 858 aa25.04■■□□□ 1.6
CIRBP-246ENST00000628979 HDAC1Q13547 482 aaPredicted RBP25.04■■□□□ 1.6
CIRBP-246ENST00000628979 IFNL1Q8IU54 200 aa25.04■■□□□ 1.6
CIRBP-246ENST00000628979 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.04■■□□□ 1.61e-6■■□□□ 11.4
CIRBP-246ENST00000628979 SAP30BPQ9UHR5 308 aaKnown RBP25.04■■□□□ 1.6
CIRBP-246ENST00000628979 FLT1P17948 1338 aa25.04■■□□□ 1.6
CIRBP-246ENST00000628979 SLC4A8Q2Y0W8 1093 aa25.03■■□□□ 1.6
CIRBP-246ENST00000628979 PHF20L1A8MW92 1017 aa25.02■■□□□ 1.6
CIRBP-246ENST00000628979 GTF2A2P52657 109 aa25.02■■□□□ 1.6
CIRBP-246ENST00000628979 SLFNL1Q499Z3 407 aa25.02■■□□□ 1.6
CIRBP-246ENST00000628979 TMED8Q6PL24 325 aaPredicted RBP25.02■■□□□ 1.6
CIRBP-246ENST00000628979 OTUD7AQ8TE49 926 aaPredicted RBP25.02■■□□□ 1.6
CIRBP-246ENST00000628979 GCC1Q96CN9 775 aa25.02■■□□□ 1.6
CIRBP-246ENST00000628979 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.02■■□□□ 1.61e-7■■■□□ 16.4
CIRBP-246ENST00000628979 FOCADQ5VW36 1801 aa25.01■■□□□ 1.59
CIRBP-246ENST00000628979 CCL15-CCL14A0A0B4J2E2 113 aa25.01■■□□□ 1.59
CIRBP-246ENST00000628979 IGF2BP3O00425 579 aaKnown RBP eCLIP25.01■■□□□ 1.59
CIRBP-246ENST00000628979 MAP3K10Q02779 954 aa25.01■■□□□ 1.59
CIRBP-246ENST00000628979 CCL15Q16663 113 aa25.01■■□□□ 1.59
CIRBP-246ENST00000628979 OTUD7BQ6GQQ9 843 aa25.01■■□□□ 1.59
CIRBP-246ENST00000628979 CERS3Q8IU89 383 aa25.01■■□□□ 1.59
CIRBP-246ENST00000628979 MS4A4AQ96JQ5 239 aa25.01■■□□□ 1.59
CIRBP-246ENST00000628979 DHX36Q9H2U1 1008 aaKnown RBP25.01■■□□□ 1.59
CIRBP-246ENST00000628979 RWDD1Q9H446 243 aaPredicted RBP25.01■■□□□ 1.59
CIRBP-246ENST00000628979 PALD1Q9ULE6 856 aa25.01■■□□□ 1.59
CIRBP-246ENST00000628979 TCRBV5S4A2TA0A5A2 114 aa25■■□□□ 1.59
CIRBP-246ENST00000628979 IRF6O14896 467 aa25■■□□□ 1.59
CIRBP-246ENST00000628979 ALDH1A1P00352 501 aa25■■□□□ 1.59
CIRBP-246ENST00000628979 PPATQ06203 517 aa25■■□□□ 1.59
CIRBP-246ENST00000628979 PPIL2Q13356 520 aa25■■□□□ 1.59
CIRBP-246ENST00000628979 NOL9Q5SY16 702 aaKnown RBP25■■□□□ 1.59
CIRBP-246ENST00000628979 PTPN18Q99952 460 aa25■■□□□ 1.59
CIRBP-246ENST00000628979 PICK1Q9NRD5 415 aa25■■□□□ 1.59
CIRBP-246ENST00000628979 PI4KBQ9UBF8 816 aa25■■□□□ 1.59
CIRBP-246ENST00000628979 COL2A1P02458 1487 aaPredicted RBP25■■□□□ 1.59
CIRBP-246ENST00000628979 TBC1D12O60347 775 aa24.99■■□□□ 1.59
CIRBP-246ENST00000628979 ADD2P35612 726 aa24.99■■□□□ 1.59
CIRBP-246ENST00000628979 SCYL3Q8IZE3 742 aa24.99■■□□□ 1.59
CIRBP-246ENST00000628979 BRI3BPQ8WY22 251 aa24.99■■□□□ 1.59
CIRBP-246ENST00000628979 RIOK1Q9BRS2 568 aaKnown RBP24.99■■□□□ 1.59
CIRBP-246ENST00000628979 TRIM34Q9BYJ4 488 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms