RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, human

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
R3HDM4-208	ENST00000626716	ERICH6	Q7L0X2	663 aa		31.22	■■■□□ 2.59
R3HDM4-208	ENST00000626716	SH3TC2	Q8TF17	1288 aa		31.22	■■■□□ 2.59
R3HDM4-208	ENST00000626716	PICK1	Q9NRD5	415 aa		31.22	■■■□□ 2.59
R3HDM4-208	ENST00000626716	ECM2	O94769	699 aa	Predicted RBP	31.21	■■■□□ 2.59
R3HDM4-208	ENST00000626716	BTD	P43251	543 aa		31.21	■■■□□ 2.59
R3HDM4-208	ENST00000626716	SCYL3	Q8IZE3	742 aa		31.21	■■■□□ 2.59
R3HDM4-208	ENST00000626716	ZHX2	Q9Y6X8	837 aa		31.21	■■■□□ 2.59
R3HDM4-208	ENST00000626716	DOCK2	Q92608	1830 aa		31.21	■■■□□ 2.59
R3HDM4-208	ENST00000626716	ADGRA2	Q96PE1	1338 aa		31.21	■■■□□ 2.59
R3HDM4-208	ENST00000626716	MYC	P01106	439 aa	Predicted RBP	31.2	■■■□□ 2.59
R3HDM4-208	ENST00000626716	GNAI2	P04899	355 aa		31.2	■■■□□ 2.59
R3HDM4-208	ENST00000626716	TRIM27	P14373	513 aa		31.2	■■■□□ 2.59
R3HDM4-208	ENST00000626716	HOXD10	P28358	340 aa		31.2	■■■□□ 2.59
R3HDM4-208	ENST00000626716	CTGF	P29279	349 aa		31.2	■■■□□ 2.59
R3HDM4-208	ENST00000626716	MECOM	Q03112	1051 aa		31.2	■■■□□ 2.59
R3HDM4-208	ENST00000626716	GPAT2	Q6NUI2	795 aa		31.2	■■■□□ 2.59
R3HDM4-208	ENST00000626716	TRIM47	Q96LD4	638 aa		31.2	■■■□□ 2.59
R3HDM4-208	ENST00000626716	DDX4	Q9NQI0	724 aa	Known RBP	31.2	■■■□□ 2.59
R3HDM4-208	ENST00000626716	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	31.2	■■■□□ 2.59
R3HDM4-208	ENST00000626716	MROH7-TTC4	A0A0A0MT08	1334 aa		31.2	■■■□□ 2.58
R3HDM4-208	ENST00000626716	RFX7	Q2KHR2	1363 aa		31.19	■■■□□ 2.58
R3HDM4-208	ENST00000626716	DDTL	A6NHG4	134 aa	Predicted RBP	31.19	■■■□□ 2.58
R3HDM4-208	ENST00000626716	PTPRA	P18433	802 aa		31.19	■■■□□ 2.58
R3HDM4-208	ENST00000626716	ATF7IP	Q6VMQ6	1270 aa		31.19	■■■□□ 2.58
R3HDM4-208	ENST00000626716	FASTKD5	Q7L8L6	764 aa	Known RBP	31.19	■■■□□ 2.58
R3HDM4-208	ENST00000626716	PARK7	Q99497	189 aa	Known RBP	31.19	■■■□□ 2.58
R3HDM4-208	ENST00000626716	SRRD	Q9UH36	339 aa		31.19	■■■□□ 2.58
R3HDM4-208	ENST00000626716	GPR75-ASB3	A0A0A6YYF3	556 aa		31.18	■■■□□ 2.58
R3HDM4-208	ENST00000626716	FMNL1	O95466	1100 aa	Predicted RBP	31.18	■■■□□ 2.58
R3HDM4-208	ENST00000626716	PICALM	Q13492	652 aa		31.18	■■■□□ 2.58
R3HDM4-208	ENST00000626716	GORAB	Q5T7V8	394 aa		31.18	■■■□□ 2.58
R3HDM4-208	ENST00000626716	FRAT1	Q92837	279 aa	Predicted RBP	31.18	■■■□□ 2.58
R3HDM4-208	ENST00000626716	HMG20B	Q9P0W2	317 aa		31.18	■■■□□ 2.58
R3HDM4-208	ENST00000626716	AFG3L2	Q9Y4W6	797 aa		31.18	■■■□□ 2.58
R3HDM4-208	ENST00000626716	CTNND1	O60716	968 aa	Known RBP	31.17	■■■□□ 2.58
R3HDM4-208	ENST00000626716	BCAR3	O75815	825 aa		31.17	■■■□□ 2.58
R3HDM4-208	ENST00000626716		A0A0G2JLL6	359 aa	Predicted RBP	31.16	■■■□□ 2.58
R3HDM4-208	ENST00000626716	OSBP	P22059	807 aa		31.16	■■■□□ 2.58
R3HDM4-208	ENST00000626716	G3BP1	Q13283	466 aa	Known RBP eCLIP	31.16	■■■□□ 2.58
R3HDM4-208	ENST00000626716	PRRT2	Q7Z6L0	340 aa	Predicted RBP	31.16	■■■□□ 2.58
R3HDM4-208	ENST00000626716	SPATA5	Q8NB90	893 aa		31.16	■■■□□ 2.58
R3HDM4-208	ENST00000626716	ZNF384	Q8TF68	577 aa		31.16	■■■□□ 2.58
R3HDM4-208	ENST00000626716	TNN	Q9UQP3	1299 aa		31.16	■■■□□ 2.58
R3HDM4-208	ENST00000626716	LDHC	P07864	332 aa		31.15	■■■□□ 2.58
R3HDM4-208	ENST00000626716	CYP2C8	P10632	490 aa		31.15	■■■□□ 2.58
R3HDM4-208	ENST00000626716	RHBDL3	P58872	404 aa		31.15	■■■□□ 2.58
R3HDM4-208	ENST00000626716	GSTO1	P78417	241 aa		31.15	■■■□□ 2.58
R3HDM4-208	ENST00000626716	PNMA6E	A0A0J9YXQ4	647 aa		31.14	■■■□□ 2.58
R3HDM4-208	ENST00000626716	NPM3	O75607	178 aa	Known RBP	31.14	■■■□□ 2.58
R3HDM4-208	ENST00000626716	SLURP2	P0DP57	97 aa		31.14	■■■□□ 2.58
R3HDM4-208	ENST00000626716	BCR	P11274	1271 aa		31.14	■■■□□ 2.58
R3HDM4-208	ENST00000626716	RAET1E	Q8TD07	263 aa		31.14	■■■□□ 2.58
R3HDM4-208	ENST00000626716	CLUAP1	Q96AJ1	413 aa		31.14	■■■□□ 2.58
R3HDM4-208	ENST00000626716	TBC1D12	O60347	775 aa		31.13	■■■□□ 2.57
R3HDM4-208	ENST00000626716	MAP4K4	O95819	1239 aa	Predicted RBP	31.13	■■■□□ 2.57
R3HDM4-208	ENST00000626716	PI16	Q6UXB8	463 aa		31.13	■■■□□ 2.57
R3HDM4-208	ENST00000626716	TBC1D9	Q6ZT07	1266 aa		31.13	■■■□□ 2.57
R3HDM4-208	ENST00000626716	NSUN4	Q96CB9	384 aa	Known RBP	31.13	■■■□□ 2.57
R3HDM4-208	ENST00000626716	ARID4A	P29374	1257 aa	Predicted RBP	31.12	■■■□□ 2.57
R3HDM4-208	ENST00000626716	GADL1	Q6ZQY3	521 aa		31.12	■■■□□ 2.57
R3HDM4-208	ENST00000626716	SLC45A1	Q9Y2W3	748 aa		31.12	■■■□□ 2.57
R3HDM4-208	ENST00000626716	GRK4	P32298	578 aa		31.11	■■■□□ 2.57
R3HDM4-208	ENST00000626716	FCGRT	P55899	365 aa		31.11	■■■□□ 2.57
R3HDM4-208	ENST00000626716	MYPN	Q86TC9	1320 aa		31.11	■■■□□ 2.57
R3HDM4-208	ENST00000626716	RAI14	Q9P0K7	980 aa		31.11	■■■□□ 2.57
R3HDM4-208	ENST00000626716	MTFR1	Q15390	333 aa		31.1	■■■□□ 2.57
R3HDM4-208	ENST00000626716	HABP4	Q5JVS0	413 aa	Known RBP	31.1	■■■□□ 2.57
R3HDM4-208	ENST00000626716	DOCK1	Q14185	1865 aa		31.1	■■■□□ 2.57
R3HDM4-208	ENST00000626716	PTPRF	P10586	1907 aa		31.09	■■■□□ 2.57
R3HDM4-208	ENST00000626716	UQCRFS1P1	P0C7P4	283 aa		31.09	■■■□□ 2.57
R3HDM4-208	ENST00000626716	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	31.09	■■■□□ 2.57
R3HDM4-208	ENST00000626716	MGAM	O43451	1857 aa		31.09	■■■□□ 2.57
R3HDM4-208	ENST00000626716	PHIP	Q8WWQ0	1821 aa		31.09	■■■□□ 2.57
R3HDM4-208	ENST00000626716	CEP290	O15078	2479 aa		31.08	■■■□□ 2.57
R3HDM4-208	ENST00000626716	TRIM75P	A6NK02	468 aa		31.08	■■■□□ 2.57
R3HDM4-208	ENST00000626716	MCAM	P43121	646 aa		31.08	■■■□□ 2.57
R3HDM4-208	ENST00000626716	LRP2BP	Q9P2M1	347 aa		31.08	■■■□□ 2.57
R3HDM4-208	ENST00000626716	ZKSCAN2	Q63HK3	967 aa		31.07	■■■□□ 2.56
R3HDM4-208	ENST00000626716	TMEM57	Q8N5G2	664 aa		31.07	■■■□□ 2.56
R3HDM4-208	ENST00000626716	PRKCZ	Q05513	592 aa		31.06	■■■□□ 2.56
R3HDM4-208	ENST00000626716	OSBPL5	Q9H0X9	879 aa	Predicted RBP	31.06	■■■□□ 2.56
R3HDM4-208	ENST00000626716	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	31.06	■■■□□ 2.56
R3HDM4-208	ENST00000626716	BIN2	Q9UBW5	565 aa	Predicted RBP	31.06	■■■□□ 2.56
R3HDM4-208	ENST00000626716	NKX2-3	Q8TAU0	364 aa		31.05	■■■□□ 2.56
R3HDM4-208	ENST00000626716	GPR108	Q9NPR9	543 aa		31.05	■■■□□ 2.56
R3HDM4-208	ENST00000626716	FAM196B	A6NMK8	535 aa		31.04	■■■□□ 2.56
R3HDM4-208	ENST00000626716	POLA2	Q14181	598 aa		31.04	■■■□□ 2.56
R3HDM4-208	ENST00000626716	CCDC84	Q86UT8	332 aa	Predicted RBP	31.04	■■■□□ 2.56
R3HDM4-208	ENST00000626716	SMCR8	Q8TEV9	937 aa	Predicted RBP	31.04	■■■□□ 2.56
R3HDM4-208	ENST00000626716	AGTPBP1	Q9UPW5	1226 aa		31.04	■■■□□ 2.56
R3HDM4-208	ENST00000626716	COL2A1	P02458	1487 aa	Predicted RBP	31.03	■■■□□ 2.56
R3HDM4-208	ENST00000626716	CCL5	P13501	91 aa		31.03	■■■□□ 2.56
R3HDM4-208	ENST00000626716	UBXN2A	P68543	259 aa		31.03	■■■□□ 2.56
R3HDM4-208	ENST00000626716	ATP8B2	P98198	1209 aa		31.03	■■■□□ 2.56
R3HDM4-208	ENST00000626716	TEX11	Q8IYF3	940 aa		31.03	■■■□□ 2.56
R3HDM4-208	ENST00000626716	GABRQ	Q9UN88	632 aa		31.03	■■■□□ 2.56
R3HDM4-208	ENST00000626716	CCDC158	Q5M9N0	1113 aa		31.02	■■■□□ 2.56
R3HDM4-208	ENST00000626716	SLAIN1	Q8ND83	568 aa		31.02	■■■□□ 2.56
R3HDM4-208	ENST00000626716	SHISA4	Q96DD7	197 aa		31.02	■■■□□ 2.56
R3HDM4-208	ENST00000626716	NOL10	Q9BSC4	688 aa	Known RBP	31.02	■■■□□ 2.56

Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms