RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 HSPA1AP0DMV8 641 aaKnown RBP24.25■■□□□ 1.47
PNKP-219ENST00000626274 HSPA1BP0DMV9 641 aaKnown RBP24.25■■□□□ 1.47
PNKP-219ENST00000626274 PDE6AP16499 860 aa24.25■■□□□ 1.47
PNKP-219ENST00000626274 CERS3Q8IU89 383 aa24.25■■□□□ 1.47
PNKP-219ENST00000626274 SLC10A4Q96EP9 437 aa24.25■■□□□ 1.47
PNKP-219ENST00000626274 ERC2O15083 957 aa24.24■■□□□ 1.47
PNKP-219ENST00000626274 MAP3K9P80192 1104 aa24.24■■□□□ 1.47
PNKP-219ENST00000626274 KIF23Q02241 960 aaPredicted RBP24.24■■□□□ 1.47
PNKP-219ENST00000626274 TSHZ3Q63HK5 1081 aa24.24■■□□□ 1.47
PNKP-219ENST00000626274 OTUD7AQ8TE49 926 aaPredicted RBP24.24■■□□□ 1.47
PNKP-219ENST00000626274 CLMNQ96JQ2 1002 aa24.24■■□□□ 1.47
PNKP-219ENST00000626274 CSRNP1Q96S65 589 aa24.24■■□□□ 1.47
PNKP-219ENST00000626274 ZIC5Q96T25 663 aa24.24■■□□□ 1.47
PNKP-219ENST00000626274 ZNF341Q9BYN7 854 aa24.24■■□□□ 1.47
PNKP-219ENST00000626274 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.24■■□□□ 1.47
PNKP-219ENST00000626274 WBP1LQ9NX94 342 aa24.24■■□□□ 1.47
PNKP-219ENST00000626274 MX1P20591 662 aa24.23■■□□□ 1.47
PNKP-219ENST00000626274 DYNLL1P63167 89 aaKnown RBP24.23■■□□□ 1.47
PNKP-219ENST00000626274 MIGA2Q7L4E1 593 aa24.23■■□□□ 1.47
PNKP-219ENST00000626274 SH3BP5LQ7L8J4 393 aa24.23■■□□□ 1.47
PNKP-219ENST00000626274 MIGA1Q8NAN2 632 aa24.23■■□□□ 1.47
PNKP-219ENST00000626274 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.23■■□□□ 1.47
PNKP-219ENST00000626274 COL2A1P02458 1487 aaPredicted RBP24.22■■□□□ 1.47
PNKP-219ENST00000626274 ATRNL1Q5VV63 1379 aa24.22■■□□□ 1.47
PNKP-219ENST00000626274 ZNF532Q9HCE3 1301 aa24.22■■□□□ 1.47
PNKP-219ENST00000626274 DDTLA6NHG4 134 aaPredicted RBP24.22■■□□□ 1.47
PNKP-219ENST00000626274 GLRX3O76003 335 aaKnown RBP24.22■■□□□ 1.47
PNKP-219ENST00000626274 TGFBRAP1Q8WUH2 860 aa24.22■■□□□ 1.47
PNKP-219ENST00000626274 AIDAQ96BJ3 306 aa24.22■■□□□ 1.47
PNKP-219ENST00000626274 OSBPL5Q9H0X9 879 aaPredicted RBP24.22■■□□□ 1.47
PNKP-219ENST00000626274 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.22■■□□□ 1.47
PNKP-219ENST00000626274 CSADQ9Y600 493 aa24.22■■□□□ 1.47
PNKP-219ENST00000626274 SALL3Q9BXA9 1300 aa24.21■■□□□ 1.47
PNKP-219ENST00000626274 TCRBV5S4A2TA0A5A2 114 aa24.21■■□□□ 1.47
PNKP-219ENST00000626274 ADD2P35612 726 aa24.21■■□□□ 1.47
PNKP-219ENST00000626274 SPRYD7Q5W111 196 aa24.21■■□□□ 1.47
PNKP-219ENST00000626274 B4GALNT3Q6L9W6 998 aa24.21■■□□□ 1.47
PNKP-219ENST00000626274 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.21■■□□□ 1.47
PNKP-219ENST00000626274 REM2Q8IYK8 340 aaPredicted RBP24.21■■□□□ 1.47
PNKP-219ENST00000626274 PI4K2BQ8TCG2 481 aa24.21■■□□□ 1.47
PNKP-219ENST00000626274 WRNIP1Q96S55 665 aa24.21■■□□□ 1.47
PNKP-219ENST00000626274 BEGAINQ9BUH8 593 aa24.21■■□□□ 1.47
PNKP-219ENST00000626274 LNPKQ9C0E8 428 aa24.21■■□□□ 1.47
PNKP-219ENST00000626274 VGLL4Q14135 290 aa24.2■■□□□ 1.46
PNKP-219ENST00000626274 ZSCAN25Q6NSZ9 544 aa24.2■■□□□ 1.46
PNKP-219ENST00000626274 MYH1P12882 1939 aa24.2■■□□□ 1.46
PNKP-219ENST00000626274 MAGEB6P1A0A0J9YX57 407 aa24.19■■□□□ 1.46
PNKP-219ENST00000626274 MAPKAPK5Q8IW41 473 aa24.19■■□□□ 1.46
PNKP-219ENST00000626274 WNK4Q96J92 1243 aa24.19■■□□□ 1.46
PNKP-219ENST00000626274 RIOK1Q9BRS2 568 aaKnown RBP24.19■■□□□ 1.46
PNKP-219ENST00000626274 ELP3Q9H9T3 547 aa24.19■■□□□ 1.46
PNKP-219ENST00000626274 ZNF112Q9UJU3 913 aa24.19■■□□□ 1.46
PNKP-219ENST00000626274 FLT1P17948 1338 aa24.18■■□□□ 1.46
PNKP-219ENST00000626274 ZBTB48P10074 688 aaPredicted RBP24.18■■□□□ 1.46
PNKP-219ENST00000626274 NUCB1Q02818 461 aa24.18■■□□□ 1.46
PNKP-219ENST00000626274 MKRN3Q13064 507 aaKnown RBP24.18■■□□□ 1.46
PNKP-219ENST00000626274 UBE3CQ15386 1083 aa24.18■■□□□ 1.46
PNKP-219ENST00000626274 CHD1LQ86WJ1 897 aa24.18■■□□□ 1.46
PNKP-219ENST00000626274 KBTBD3Q8NAB2 608 aa24.18■■□□□ 1.46
PNKP-219ENST00000626274 STAP2Q9UGK3 403 aa24.18■■□□□ 1.46
PNKP-219ENST00000626274 USP5P45974 858 aa24.17■■□□□ 1.46
PNKP-219ENST00000626274 MAP3K10Q02779 954 aa24.17■■□□□ 1.46
PNKP-219ENST00000626274 ZKSCAN4Q969J2 545 aaPredicted RBP24.17■■□□□ 1.46
PNKP-219ENST00000626274 DHX36Q9H2U1 1008 aaKnown RBP24.17■■□□□ 1.46
PNKP-219ENST00000626274 LAMB1P07942 1786 aa24.16■■□□□ 1.46
PNKP-219ENST00000626274 FOXN1O15353 648 aa24.16■■□□□ 1.46
PNKP-219ENST00000626274 TBC1D12O60347 775 aa24.16■■□□□ 1.46
PNKP-219ENST00000626274 PDE1AP54750 535 aa24.16■■□□□ 1.46
PNKP-219ENST00000626274 OPTNQ96CV9 577 aa24.16■■□□□ 1.46
PNKP-219ENST00000626274 CA12O43570 354 aa24.15■■□□□ 1.46
PNKP-219ENST00000626274 INPP5BP32019 993 aa24.15■■□□□ 1.46
PNKP-219ENST00000626274 SLFNL1Q499Z3 407 aa24.15■■□□□ 1.46
PNKP-219ENST00000626274 CRNKL1Q9BZJ0 848 aaKnown RBP24.15■■□□□ 1.46
PNKP-219ENST00000626274 PI4KBQ9UBF8 816 aa24.15■■□□□ 1.46
PNKP-219ENST00000626274 SNCAIPQ9Y6H5 919 aa24.15■■□□□ 1.46
PNKP-219ENST00000626274 MANSC4A6NHS7 340 aaPredicted RBP24.14■■□□□ 1.45
PNKP-219ENST00000626274 SPDYE5A6NIY4 337 aa24.14■■□□□ 1.45
PNKP-219ENST00000626274 SIPA1L1O43166 1804 aa24.14■■□□□ 1.45
PNKP-219ENST00000626274 PCNTO95613 3336 aa24.13■■□□□ 1.45
PNKP-219ENST00000626274 PHF20L1A8MW92 1017 aa24.13■■□□□ 1.45
PNKP-219ENST00000626274 ZFYP08048 801 aaPredicted RBP24.13■■□□□ 1.45
PNKP-219ENST00000626274 GJA5P36382 358 aa24.13■■□□□ 1.45
PNKP-219ENST00000626274 TM4SF4P48230 202 aa24.13■■□□□ 1.45
PNKP-219ENST00000626274 CTCFP49711 727 aaPredicted RBP24.13■■□□□ 1.45
PNKP-219ENST00000626274 SREBF2Q12772 1141 aa24.13■■□□□ 1.45
PNKP-219ENST00000626274 LRRFIP1Q32MZ4 808 aaKnown RBP24.13■■□□□ 1.45
PNKP-219ENST00000626274 NOL9Q5SY16 702 aaKnown RBP24.13■■□□□ 1.45
PNKP-219ENST00000626274 ERO1BQ86YB8 467 aa24.13■■□□□ 1.45
PNKP-219ENST00000626274 LCORLQ8N3X6 602 aa24.13■■□□□ 1.45
PNKP-219ENST00000626274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.13■■□□□ 1.45
PNKP-219ENST00000626274 SAP30BPQ9UHR5 308 aaKnown RBP24.13■■□□□ 1.45
PNKP-219ENST00000626274 PALD1Q9ULE6 856 aa24.13■■□□□ 1.45
PNKP-219ENST00000626274 NAV1Q8NEY1 1877 aa24.13■■□□□ 1.45
PNKP-219ENST00000626274 MBD4O95243 580 aa24.12■■□□□ 1.45
PNKP-219ENST00000626274 CHGBP05060 677 aa24.12■■□□□ 1.45
PNKP-219ENST00000626274 SLURP2P0DP57 97 aa24.12■■□□□ 1.45
PNKP-219ENST00000626274 INHBEP58166 350 aa24.12■■□□□ 1.45
PNKP-219ENST00000626274 FOXP4Q8IVH2 680 aaPredicted RBP24.12■■□□□ 1.45
PNKP-219ENST00000626274 CNKSR2Q8WXI2 1034 aa24.12■■□□□ 1.45
PNKP-219ENST00000626274 OTUD5Q96G74 571 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms