RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 ORC4O43929 436 aa13.78□□□□□ -0.2
CCDC163-201ENST00000625766 PLCG2P16885 1265 aa13.78□□□□□ -0.2
CCDC163-201ENST00000625766 FKBP1AP62942 108 aaKnown RBP13.78□□□□□ -0.2
CCDC163-201ENST00000625766 NOL10Q9BSC4 688 aaKnown RBP13.78□□□□□ -0.2
CCDC163-201ENST00000625766 COL11A2P13942 1736 aaPredicted RBP13.77□□□□□ -0.2
CCDC163-201ENST00000625766 TIAM2Q8IVF5 1701 aa13.77□□□□□ -0.2
CCDC163-201ENST00000625766 IFIT3O14879 490 aaKnown RBP13.77□□□□□ -0.21
CCDC163-201ENST00000625766 SLC3A2P08195 630 aaKnown RBP13.77□□□□□ -0.21
CCDC163-201ENST00000625766 RCAN1P53805 252 aa13.77□□□□□ -0.21
CCDC163-201ENST00000625766 GSE1Q14687 1217 aa13.77□□□□□ -0.21
CCDC163-201ENST00000625766 SART3Q15020 963 aaKnown RBP13.77□□□□□ -0.21
CCDC163-201ENST00000625766 TMEM67Q5HYA8 995 aa13.77□□□□□ -0.21
CCDC163-201ENST00000625766 FOXD4L5Q5VV16 416 aaPredicted RBP13.77□□□□□ -0.21
CCDC163-201ENST00000625766 FOXD4L4Q8WXT5 416 aaPredicted RBP13.77□□□□□ -0.21
CCDC163-201ENST00000625766 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCDC163-201ENST00000625766 KIAA1551Q9HCM1 1747 aa13.77□□□□□ -0.21
CCDC163-201ENST00000625766 C12orf60Q5U649 245 aa13.76□□□□□ -0.21
CCDC163-201ENST00000625766 APOA5Q6Q788 366 aa13.76□□□□□ -0.21
CCDC163-201ENST00000625766 SH3RF3Q8TEJ3 882 aaPredicted RBP13.76□□□□□ -0.21
CCDC163-201ENST00000625766 NCOA5Q9HCD5 579 aaKnown RBP13.76□□□□□ -0.21
CCDC163-201ENST00000625766 MAST2Q6P0Q8 1798 aa13.76□□□□□ -0.21
CCDC163-201ENST00000625766 C10orf71Q711Q0 1435 aa13.76□□□□□ -0.21
CCDC163-201ENST00000625766 PTPDC1A2A3K4 754 aa13.76□□□□□ -0.21
CCDC163-201ENST00000625766 DOK7Q18PE1 504 aa13.76□□□□□ -0.21
CCDC163-201ENST00000625766 TTLL6Q8N841 843 aa13.76□□□□□ -0.21
CCDC163-201ENST00000625766 FAM184AQ8NB25 1140 aa13.76□□□□□ -0.21
CCDC163-201ENST00000625766 SUPT20HQ8NEM7 779 aa13.76□□□□□ -0.21
CCDC163-201ENST00000625766 SNED1Q8TER0 1413 aa13.76□□□□□ -0.21
CCDC163-201ENST00000625766 GOLGA8BA8MQT2 603 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 G3V3G9 751 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 PRPF40AO75400 957 aaKnown RBP13.75□□□□□ -0.21
CCDC163-201ENST00000625766 FDPSP14324 419 aaKnown RBP13.75□□□□□ -0.21
CCDC163-201ENST00000625766 KCNA3P22001 575 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 BTDP43251 543 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 USP5P45974 858 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 RHBDL3P58872 404 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 KLHL40Q2TBA0 621 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 DCAF8Q5TAQ9 597 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 STRIP1Q5VSL9 837 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 TMEM87AQ8NBN3 555 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 MCM9Q9NXL9 1143 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 SLX4Q8IY92 1834 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 CYP2D7A0A087X1C5 515 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 ERICH2A1L162 156 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 ZBTB43O43298 467 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 DTNBO60941 627 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 PDE4BQ07343 736 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 PPP2R5BQ15173 497 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 SEC23AQ15436 765 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 RRP12Q5JTH9 1297 aaKnown RBP13.75□□□□□ -0.21
CCDC163-201ENST00000625766 HHIPL2Q6UWX4 724 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 CERS5Q8N5B7 392 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 DDX11Q96FC9 970 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 SENP2Q9HC62 589 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 TOMM22Q9NS69 142 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 NAP1L2Q9ULW6 460 aaPredicted RBP13.75□□□□□ -0.21
CCDC163-201ENST00000625766 SLC12A7Q9Y666 1083 aa13.75□□□□□ -0.21
CCDC163-201ENST00000625766 NID2Q14112 1375 aa13.74□□□□□ -0.21
CCDC163-201ENST00000625766 CCDC69A6NI79 296 aa13.74□□□□□ -0.21
CCDC163-201ENST00000625766 SMIM22K7EJ46 135 aa13.74□□□□□ -0.21
CCDC163-201ENST00000625766 METAP2P50579 478 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCDC163-201ENST00000625766 KIAA2012Q0VF49 1180 aa13.74□□□□□ -0.21
CCDC163-201ENST00000625766 WTAPQ15007 396 aa13.74□□□□□ -0.21
CCDC163-201ENST00000625766 SYNE3Q6ZMZ3 975 aa13.74□□□□□ -0.21
CCDC163-201ENST00000625766 ZSCAN16Q9H4T2 348 aaPredicted RBP13.74□□□□□ -0.21
CCDC163-201ENST00000625766 FAM217BQ9NTX9 383 aaPredicted RBP13.74□□□□□ -0.21
CCDC163-201ENST00000625766 VPS37CA5D8V6 355 aaPredicted RBP13.73□□□□□ -0.21
CCDC163-201ENST00000625766 USP17L8P0C7I0 530 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 TGFB2P61812 414 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 NTRK3Q16288 839 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 NFXL1Q6ZNB6 911 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 RTKN2Q8IZC4 609 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 TGFBRAP1Q8WUH2 860 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 ZSCAN10Q96SZ4 725 aaPredicted RBP13.73□□□□□ -0.21
CCDC163-201ENST00000625766 UBAC1Q9BSL1 405 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 VPS33BQ9H267 617 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 DAGLAQ9Y4D2 1042 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 CHD4Q14839 1912 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 CPLX1O14810 134 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 CDKL5O76039 1030 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 ADD1P35611 737 aaKnown RBP13.73□□□□□ -0.21
CCDC163-201ENST00000625766 HDLBPQ00341 1268 aaKnown RBP13.73□□□□□ -0.21
CCDC163-201ENST00000625766 CPLX2Q6PUV4 134 aaKnown RBP13.73□□□□□ -0.21
CCDC163-201ENST00000625766 CDC37L1Q7L3B6 337 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 IQCA1Q86XH1 822 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 AMOTL1Q8IY63 956 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 CHAMP1Q96JM3 812 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 PSMD1Q99460 953 aa13.73□□□□□ -0.21
CCDC163-201ENST00000625766 DDX49Q9Y6V7 483 aaKnown RBP13.73□□□□□ -0.21
CCDC163-201ENST00000625766 CYP2D6P10635 497 aa13.72□□□□□ -0.21
CCDC163-201ENST00000625766 USP48Q86UV5 1035 aa13.72□□□□□ -0.21
CCDC163-201ENST00000625766 TEX11Q8IYF3 940 aa13.72□□□□□ -0.21
CCDC163-201ENST00000625766 TTF2Q9UNY4 1162 aaKnown RBP13.72□□□□□ -0.21
CCDC163-201ENST00000625766 ROBO3Q96MS0 1386 aa13.72□□□□□ -0.21
CCDC163-201ENST00000625766 H3BQV1 296 aa13.71□□□□□ -0.21
CCDC163-201ENST00000625766 C21orf2O43822 256 aa13.71□□□□□ -0.21
CCDC163-201ENST00000625766 RANBP6O60518 1105 aaKnown RBP13.71□□□□□ -0.21
CCDC163-201ENST00000625766 DPEP1P16444 411 aa13.71□□□□□ -0.21
CCDC163-201ENST00000625766 CDC27P30260 824 aa13.71□□□□□ -0.21
CCDC163-201ENST00000625766 DACT2Q5SW24 774 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms