RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 GNL3Q9BVP2 549 aaKnown RBP eCLIP13□□□□□ -0.33
VARS2-213ENST00000625423 NAPBQ9H115 298 aa13□□□□□ -0.33
VARS2-213ENST00000625423 SLC12A7Q9Y666 1083 aa13□□□□□ -0.33
VARS2-213ENST00000625423 TACC3Q9Y6A5 838 aa13□□□□□ -0.33
VARS2-213ENST00000625423 MBD4O95243 580 aa13□□□□□ -0.33
VARS2-213ENST00000625423 RESP18Q5W5W9 173 aa13□□□□□ -0.33
VARS2-213ENST00000625423 SPATA5Q8NB90 893 aa13□□□□□ -0.33
VARS2-213ENST00000625423 SYTL4Q96C24 671 aaPredicted RBP13□□□□□ -0.33
VARS2-213ENST00000625423 ARMT1Q9H993 441 aa13□□□□□ -0.33
VARS2-213ENST00000625423 CGNQ9P2M7 1197 aaKnown RBP13□□□□□ -0.33
VARS2-213ENST00000625423 FGFR2P21802 821 aa12.99□□□□□ -0.33
VARS2-213ENST00000625423 SSRP1Q08945 709 aaKnown RBP12.99□□□□□ -0.33
VARS2-213ENST00000625423 ALX1Q15699 326 aa12.99□□□□□ -0.33
VARS2-213ENST00000625423 LONRF3Q496Y0 759 aa12.99□□□□□ -0.33
VARS2-213ENST00000625423 PPP1R13BQ96KQ4 1090 aa12.99□□□□□ -0.33
VARS2-213ENST00000625423 LIFRP42702 1097 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 RASGRF1Q13972 1273 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 SPECC1Q5M775 1068 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 METTL16Q86W50 562 aaKnown RBP12.98□□□□□ -0.33
VARS2-213ENST00000625423 DZIP3Q86Y13 1208 aaKnown RBP12.98□□□□□ -0.33
VARS2-213ENST00000625423 DPF2Q92785 391 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 FEZ1Q99689 392 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 PRKAB2O43741 272 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 GUCY1A2P33402 732 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 MYL5Q02045 173 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 MAP3K12Q12852 859 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 RRP12Q5JTH9 1297 aaKnown RBP12.98□□□□□ -0.33
VARS2-213ENST00000625423 FOXP4Q8IVH2 680 aaPredicted RBP12.98□□□□□ -0.33
VARS2-213ENST00000625423 STK11IPQ8N1F8 1099 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.98□□□□□ -0.33
VARS2-213ENST00000625423 MYO5AQ9Y4I1 1855 aaKnown RBP12.98□□□□□ -0.33
VARS2-213ENST00000625423 MROH5Q6ZUA9 1318 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 FAM237AA0A1B0GTK4 181 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 CUTAO60888 179 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 SERPINC1P01008 464 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 UBASH3AP57075 661 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 DMTNQ08495 405 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 CNNM3Q8NE01 707 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 ZKSCAN3Q9BRR0 538 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 TOMM22Q9NS69 142 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 BTG4Q9NY30 223 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 KCNH3Q9ULD8 1083 aa12.98□□□□□ -0.33
VARS2-213ENST00000625423 BTBD18B2RXH4 712 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 KIF2AO00139 706 aaPredicted RBP12.97□□□□□ -0.33
VARS2-213ENST00000625423 FMNL1O95466 1100 aaPredicted RBP12.97□□□□□ -0.33
VARS2-213ENST00000625423 CCDC82Q8N4S0 544 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 PSDA5PKW4 1024 aaPredicted RBP12.97□□□□□ -0.33
VARS2-213ENST00000625423 GSG1L2A8MUP6 293 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 FOXN1O15353 648 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 SLC5A1P13866 664 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 PTPN21Q16825 1174 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 AKNAD1Q5T1N1 836 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 SYT10Q6XYQ8 523 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 KRBA2Q6ZNG9 492 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 MFSD6Q6ZSS7 791 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 NOSTRINQ8IVI9 506 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 KCNJ14Q9UNX9 436 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 PCDHA5Q9Y5H7 936 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 NRDCO43847 1150 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 CFAP100Q494V2 611 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 ERO1AQ96HE7 468 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 OGFRQ9NZT2 677 aa12.97□□□□□ -0.33
VARS2-213ENST00000625423 SLU7O95391 586 aaKnown RBP12.96□□□□□ -0.33
VARS2-213ENST00000625423 OLFM4Q6UX06 510 aa12.96□□□□□ -0.33
VARS2-213ENST00000625423 ZNF34Q8IZ26 560 aa12.96□□□□□ -0.33
VARS2-213ENST00000625423 KRI1Q8N9T8 703 aaKnown RBP12.96□□□□□ -0.33
VARS2-213ENST00000625423 CNNM2Q9H8M5 875 aa12.96□□□□□ -0.33
VARS2-213ENST00000625423 SEC31BQ9NQW1 1179 aa12.96□□□□□ -0.33
VARS2-213ENST00000625423 XIRP1Q702N8 1843 aaKnown RBP12.96□□□□□ -0.33
VARS2-213ENST00000625423 STK36Q9NRP7 1315 aa12.96□□□□□ -0.33
VARS2-213ENST00000625423 ERVV-1B6SEH8 477 aa12.96□□□□□ -0.34
VARS2-213ENST00000625423 IFNAR1P17181 557 aa12.96□□□□□ -0.34
VARS2-213ENST00000625423 TDO2P48775 406 aa12.96□□□□□ -0.34
VARS2-213ENST00000625423 GRIN1Q05586 938 aa12.96□□□□□ -0.34
VARS2-213ENST00000625423 ELF2Q15723 593 aa12.96□□□□□ -0.34
VARS2-213ENST00000625423 DIS3L2Q8IYB7 885 aaKnown RBP12.96□□□□□ -0.34
VARS2-213ENST00000625423 CMTR1Q8N1G2 835 aaKnown RBP12.96□□□□□ -0.34
VARS2-213ENST00000625423 LCORLQ8N3X6 602 aa12.96□□□□□ -0.34
VARS2-213ENST00000625423 MPHOSPH8Q99549 860 aa12.96□□□□□ -0.34
VARS2-213ENST00000625423 FANCLQ9NW38 375 aa12.96□□□□□ -0.34
VARS2-213ENST00000625423 BCL9O00512 1426 aa12.96□□□□□ -0.34
VARS2-213ENST00000625423 MMP1P03956 469 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 TOB1P50616 345 aaPredicted RBP12.95□□□□□ -0.34
VARS2-213ENST00000625423 KMT5BQ4FZB7 885 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 KRT23Q9C075 422 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 SLC4A4Q9Y6R1 1079 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 TMEM232C9JQI7 657 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 NPHP1O15259 732 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 CBFA2T2O43439 604 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 BMP6P22004 513 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 KCNJ6P48051 423 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 BCAMP50895 628 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 PDE4BQ07343 736 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 GOLGA8FQ08AF8 430 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 GOLGA8DPQ0D2H9 430 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 DHX8Q14562 1220 aaKnown RBP12.95□□□□□ -0.34
VARS2-213ENST00000625423 WASF1Q92558 559 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 LRP6O75581 1613 aa12.95□□□□□ -0.34
VARS2-213ENST00000625423 IL6STP40189 918 aaPredicted RBP12.95□□□□□ -0.34
VARS2-213ENST00000625423 WTAPQ15007 396 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms