RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 CCDC86Q9H6F5 360 aaKnown RBP5.42□□□□□ -1.54
CDKL5-208ENST00000624953 RBM47A0AV96 593 aaKnown RBP5.41□□□□□ -1.54
CDKL5-208ENST00000624953 HYAL3O43820 417 aaPredicted RBP5.41□□□□□ -1.54
CDKL5-208ENST00000624953 ADH5P11766 374 aa5.41□□□□□ -1.54
CDKL5-208ENST00000624953 ARNTP27540 789 aa5.41□□□□□ -1.54
CDKL5-208ENST00000624953 MFAP1P55081 439 aaKnown RBP5.41□□□□□ -1.54
CDKL5-208ENST00000624953 RING1Q06587 406 aa5.41□□□□□ -1.54
CDKL5-208ENST00000624953 SOX4Q06945 474 aaPredicted RBP5.41□□□□□ -1.54
CDKL5-208ENST00000624953 SV2BQ7L1I2 683 aa5.41□□□□□ -1.54
CDKL5-208ENST00000624953 SULF2Q8IWU5 870 aa5.41□□□□□ -1.54
CDKL5-208ENST00000624953 DDX54Q8TDD1 881 aaKnown RBP5.41□□□□□ -1.54
CDKL5-208ENST00000624953 GAL3ST3Q96A11 431 aa5.41□□□□□ -1.54
CDKL5-208ENST00000624953 PPP4R2Q9NY27 417 aa5.41□□□□□ -1.54
CDKL5-208ENST00000624953 TMPRSS2O15393 492 aa5.4□□□□□ -1.54
CDKL5-208ENST00000624953 AOC2O75106 756 aa5.4□□□□□ -1.54
CDKL5-208ENST00000624953 CELA3AP09093 270 aa5.4□□□□□ -1.54
CDKL5-208ENST00000624953 GLB1P16278 677 aa5.4□□□□□ -1.54
CDKL5-208ENST00000624953 ZNF16P17020 682 aaPredicted RBP5.4□□□□□ -1.54
CDKL5-208ENST00000624953 NTF4P34130 210 aa5.4□□□□□ -1.54
CDKL5-208ENST00000624953 HP1BP3Q5SSJ5 553 aaPredicted RBP5.4□□□□□ -1.54
CDKL5-208ENST00000624953 SEZ6L2Q6UXD5 910 aa5.4□□□□□ -1.54
CDKL5-208ENST00000624953 WDR89Q96FK6 387 aaPredicted RBP5.4□□□□□ -1.54
CDKL5-208ENST00000624953 CRELD1Q96HD1 420 aa5.4□□□□□ -1.54
CDKL5-208ENST00000624953 NOC4LQ9BVI4 516 aaKnown RBP5.4□□□□□ -1.54
CDKL5-208ENST00000624953 USP26Q9BXU7 913 aa5.4□□□□□ -1.54
CDKL5-208ENST00000624953 ACSS3Q9H6R3 686 aa5.4□□□□□ -1.54
CDKL5-208ENST00000624953 CRIM1Q9NZV1 1036 aa5.4□□□□□ -1.54
CDKL5-208ENST00000624953 PPP1R9AQ9ULJ8 1098 aa5.4□□□□□ -1.54
CDKL5-208ENST00000624953 KIAA0586Q9BVV6 1533 aa5.39□□□□□ -1.55
CDKL5-208ENST00000624953 RPS26P62854 115 aaKnown RBP5.39□□□□□ -1.55
CDKL5-208ENST00000624953 PPP2R3AQ06190 1150 aa5.39□□□□□ -1.55
CDKL5-208ENST00000624953 LRP8Q14114 963 aa5.39□□□□□ -1.55
CDKL5-208ENST00000624953 ZC3H12AQ5D1E8 599 aaKnown RBP5.39□□□□□ -1.55
CDKL5-208ENST00000624953 KRTAP19-1Q8IUB9 90 aa5.39□□□□□ -1.55
CDKL5-208ENST00000624953 GATA6Q92908 595 aa5.39□□□□□ -1.55
CDKL5-208ENST00000624953 FAM83CQ9BQN1 747 aa5.39□□□□□ -1.55
CDKL5-208ENST00000624953 CORO1BQ9BR76 489 aa5.39□□□□□ -1.55
CDKL5-208ENST00000624953 KRTAP9-9Q9BYP9 154 aa5.39□□□□□ -1.55
CDKL5-208ENST00000624953 KRTAP9-4Q9BYQ2 154 aa5.39□□□□□ -1.55
CDKL5-208ENST00000624953 CYP4F12Q9HCS2 524 aa5.39□□□□□ -1.55
CDKL5-208ENST00000624953 AKAP2Q9Y2D5 859 aa5.39□□□□□ -1.55
CDKL5-208ENST00000624953 ADAMTSL3P82987 1691 aa5.39□□□□□ -1.55
CDKL5-208ENST00000624953 CFAP43Q8NDM7 1665 aa5.39□□□□□ -1.55
CDKL5-208ENST00000624953 ASXL2Q76L83 1435 aa5.39□□□□□ -1.55
CDKL5-208ENST00000624953 SIGLEC1Q9BZZ2 1709 aa5.38□□□□□ -1.55
CDKL5-208ENST00000624953 DHX15O43143 795 aaKnown RBP5.38□□□□□ -1.55
CDKL5-208ENST00000624953 TRIM37O94972 964 aa5.38□□□□□ -1.55
CDKL5-208ENST00000624953 VAMP1P23763 118 aa5.38□□□□□ -1.55
CDKL5-208ENST00000624953 ZNF157P51786 506 aaPredicted RBP5.38□□□□□ -1.55
CDKL5-208ENST00000624953 MEI1Q5TIA1 1274 aa5.38□□□□□ -1.55
CDKL5-208ENST00000624953 NUTM2GQ5VZR2 741 aa5.38□□□□□ -1.55
CDKL5-208ENST00000624953 TPTE2Q6XPS3 522 aa5.38□□□□□ -1.55
CDKL5-208ENST00000624953 CLEC10AQ8IUN9 316 aa5.38□□□□□ -1.55
CDKL5-208ENST00000624953 RGS22Q8NE09 1264 aa5.38□□□□□ -1.55
CDKL5-208ENST00000624953 RAXQ9Y2V3 346 aa5.38□□□□□ -1.55
CDKL5-208ENST00000624953 ACTL7BQ9Y614 415 aa5.38□□□□□ -1.55
CDKL5-208ENST00000624953 EPRSP07814 1512 aaKnown RBP5.38□□□□□ -1.55
CDKL5-208ENST00000624953 CTTNBP2Q8WZ74 1663 aa5.37□□□□□ -1.55
CDKL5-208ENST00000624953 FBXO24O75426 580 aa5.37□□□□□ -1.55
CDKL5-208ENST00000624953 DRD2P14416 443 aa5.37□□□□□ -1.55
CDKL5-208ENST00000624953 PSMD2Q13200 908 aa5.37□□□□□ -1.55
CDKL5-208ENST00000624953 CDPF1Q6NVV7 123 aa5.37□□□□□ -1.55
CDKL5-208ENST00000624953 FDX2Q6P4F2 183 aa5.37□□□□□ -1.55
CDKL5-208ENST00000624953 MPRIPQ6WCQ1 1025 aa5.37□□□□□ -1.55
CDKL5-208ENST00000624953 AGMOQ6ZNB7 445 aa5.37□□□□□ -1.55
CDKL5-208ENST00000624953 GRIN3AQ8TCU5 1115 aa5.37□□□□□ -1.55
CDKL5-208ENST00000624953 UTP4Q969X6 686 aaKnown RBP5.37□□□□□ -1.55
CDKL5-208ENST00000624953 FAM161BQ96MY7 647 aa5.37□□□□□ -1.55
CDKL5-208ENST00000624953 EMILIN2Q9BXX0 1053 aa5.37□□□□□ -1.55
CDKL5-208ENST00000624953 C7orf69Q9H7B7 122 aa5.37□□□□□ -1.55
CDKL5-208ENST00000624953 KCNQ5Q9NR82 932 aa5.37□□□□□ -1.55
CDKL5-208ENST00000624953 GPN3Q9UHW5 284 aaPredicted RBP5.37□□□□□ -1.55
CDKL5-208ENST00000624953 CYP8B1Q9UNU6 501 aa5.37□□□□□ -1.55
CDKL5-208ENST00000624953 DISP1Q96F81 1524 aa5.37□□□□□ -1.55
CDKL5-208ENST00000624953 IQGAP2Q13576 1575 aa5.37□□□□□ -1.55
CDKL5-208ENST00000624953 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.36□□□□□ -1.55
CDKL5-208ENST00000624953 FSTP19883 344 aa5.36□□□□□ -1.55
CDKL5-208ENST00000624953 ERVK-24P63145 666 aa5.36□□□□□ -1.55
CDKL5-208ENST00000624953 SGO2Q562F6 1265 aa5.36□□□□□ -1.55
CDKL5-208ENST00000624953 PCNX4Q63HM2 1172 aa5.36□□□□□ -1.55
CDKL5-208ENST00000624953 RNF43Q68DV7 783 aa5.36□□□□□ -1.55
CDKL5-208ENST00000624953 ERMP1Q7Z2K6 904 aa5.36□□□□□ -1.55
CDKL5-208ENST00000624953 GIPC2Q8TF65 315 aa5.36□□□□□ -1.55
CDKL5-208ENST00000624953 RHOVQ96L33 236 aa5.36□□□□□ -1.55
CDKL5-208ENST00000624953 BCL2L13Q9BXK5 485 aa5.36□□□□□ -1.55
CDKL5-208ENST00000624953 DISC1Q9NRI5 854 aa5.36□□□□□ -1.55
CDKL5-208ENST00000624953 FAM105AQ9NUU6 356 aa5.36□□□□□ -1.55
CDKL5-208ENST00000624953 UHRF1BP1LA0JNW5 1464 aa5.36□□□□□ -1.55
CDKL5-208ENST00000624953 KDM5BQ9UGL1 1544 aa5.36□□□□□ -1.55
CDKL5-208ENST00000624953 BCORL1Q5H9F3 1711 aa5.35□□□□□ -1.55
CDKL5-208ENST00000624953 KIAA0556O60303 1618 aa5.35□□□□□ -1.55
CDKL5-208ENST00000624953 PRR19A6NJB7 356 aa5.35□□□□□ -1.55
CDKL5-208ENST00000624953 SORBS3O60504 671 aa5.35□□□□□ -1.55
CDKL5-208ENST00000624953 NEFMP07197 916 aa5.35□□□□□ -1.55
CDKL5-208ENST00000624953 BMP3P12645 472 aa5.35□□□□□ -1.55
CDKL5-208ENST00000624953 LIG1P18858 919 aa5.35□□□□□ -1.55
CDKL5-208ENST00000624953 MAP4P27816 1152 aaKnown RBP5.35□□□□□ -1.55
CDKL5-208ENST00000624953 ID3Q02535 119 aa5.35□□□□□ -1.55
CDKL5-208ENST00000624953 PTPN11Q06124 597 aaPredicted RBP5.35□□□□□ -1.55
CDKL5-208ENST00000624953 TAF1CQ15572 869 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms