RNA–Protein interactions for RNA: ENST00000623529.1

LINC01561-202, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

Gene LINC01561, Length 2,160 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-202ENST00000623529 NIM1KQ8IY84 436 aa11.96□□□□□ -0.49
LINC01561-202ENST00000623529 GMLQ99445 158 aa11.96□□□□□ -0.49
LINC01561-202ENST00000623529 SUGT1Q9Y2Z0 365 aa11.96□□□□□ -0.49
LINC01561-202ENST00000623529 MROH7-TTC4A0A0A0MT08 1334 aa11.96□□□□□ -0.49
LINC01561-202ENST00000623529 GAKO14976 1311 aa11.96□□□□□ -0.49
LINC01561-202ENST00000623529 CCDC88AQ3V6T2 1871 aa11.96□□□□□ -0.49
LINC01561-202ENST00000623529 ZNF646O15015 1829 aaPredicted RBP11.96□□□□□ -0.5
LINC01561-202ENST00000623529 LDHCP07864 332 aa11.96□□□□□ -0.5
LINC01561-202ENST00000623529 BTDP43251 543 aa11.96□□□□□ -0.5
LINC01561-202ENST00000623529 FKBP1AP62942 108 aaKnown RBP11.96□□□□□ -0.5
LINC01561-202ENST00000623529 GSTO1P78417 241 aa11.96□□□□□ -0.5
LINC01561-202ENST00000623529 HTRA3P83110 453 aa11.96□□□□□ -0.5
LINC01561-202ENST00000623529 SKOR2Q2VWA4 1001 aaPredicted RBP11.96□□□□□ -0.5
LINC01561-202ENST00000623529 APOBEC3HQ6NTF7 200 aaKnown RBP11.96□□□□□ -0.5
LINC01561-202ENST00000623529 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.96□□□□□ -0.5
LINC01561-202ENST00000623529 LTBP3Q9NS15 1303 aa11.96□□□□□ -0.5
LINC01561-202ENST00000623529 MKRN1Q9UHC7 482 aaKnown RBP11.96□□□□□ -0.5
LINC01561-202ENST00000623529 MYH2Q9UKX2 1941 aa11.96□□□□□ -0.5
LINC01561-202ENST00000623529 CYP2D7A0A087X1C5 515 aa11.95□□□□□ -0.5
LINC01561-202ENST00000623529 ZKSCAN1P17029 563 aaPredicted RBP11.95□□□□□ -0.5
LINC01561-202ENST00000623529 RABEP1Q15276 862 aa11.95□□□□□ -0.5
LINC01561-202ENST00000623529 JDP2Q8WYK2 163 aa11.95□□□□□ -0.5
LINC01561-202ENST00000623529 JAKMIP1Q96N16 626 aaKnown RBP11.95□□□□□ -0.5
LINC01561-202ENST00000623529 ZSWIM6Q9HCJ5 1215 aa11.95□□□□□ -0.5
LINC01561-202ENST00000623529 CHMP5Q9NZZ3 219 aa11.95□□□□□ -0.5
LINC01561-202ENST00000623529 E7EWF7 191 aa11.95□□□□□ -0.5
LINC01561-202ENST00000623529 GNAT2P19087 354 aa11.95□□□□□ -0.5
LINC01561-202ENST00000623529 CASTP20810 708 aaKnown RBP11.95□□□□□ -0.5
LINC01561-202ENST00000623529 MCM4P33991 863 aa11.95□□□□□ -0.5
LINC01561-202ENST00000623529 RNF20Q5VTR2 975 aa11.95□□□□□ -0.5
LINC01561-202ENST00000623529 RSBN1LQ6PCB5 846 aaPredicted RBP11.95□□□□□ -0.5
LINC01561-202ENST00000623529 TMED8Q6PL24 325 aaPredicted RBP11.95□□□□□ -0.5
LINC01561-202ENST00000623529 ANP32BQ92688 251 aaKnown RBP11.95□□□□□ -0.5
LINC01561-202ENST00000623529 TCEANC2Q96MN5 208 aa11.95□□□□□ -0.5
LINC01561-202ENST00000623529 LARP6Q9BRS8 491 aaKnown RBP11.95□□□□□ -0.5
LINC01561-202ENST00000623529 DCP1AQ9NPI6 582 aaPredicted RBP11.95□□□□□ -0.5
LINC01561-202ENST00000623529 CTNNA3Q9UI47 895 aa11.95□□□□□ -0.5
LINC01561-202ENST00000623529 ARFGEF1Q9Y6D6 1849 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 SHTN1A0MZ66 631 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 ZNF213O14771 459 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 BAG3O95817 575 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 CRKP46108 304 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 CTDSPL2Q05D32 466 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 CTR9Q6PD62 1173 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 HHIPL2Q6UWX4 724 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 TBC1D10CQ8IV04 446 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 STK11IPQ8N1F8 1099 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 TGFBRAP1Q8WUH2 860 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 MRIQ9BWK5 157 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 RNF216Q9NWF9 866 aaPredicted RBP11.94□□□□□ -0.5
LINC01561-202ENST00000623529 USP17L12C9JPN9 530 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 USP17L21D6R901 530 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 FZD9O00144 591 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 IMMTQ16891 758 aaKnown RBP11.94□□□□□ -0.5
LINC01561-202ENST00000623529 TTC14Q96N46 770 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 TM6SF1Q9BZW5 370 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 NAPBQ9H115 298 aa11.94□□□□□ -0.5
LINC01561-202ENST00000623529 WDR90Q96KV7 1748 aa11.93□□□□□ -0.5
LINC01561-202ENST00000623529 RPAP1Q9BWH6 1393 aaPredicted RBP11.93□□□□□ -0.5
LINC01561-202ENST00000623529 USP17L8P0C7I0 530 aa11.93□□□□□ -0.5
LINC01561-202ENST00000623529 CYP2D6P10635 497 aa11.93□□□□□ -0.5
LINC01561-202ENST00000623529 TDO2P48775 406 aa11.93□□□□□ -0.5
LINC01561-202ENST00000623529 SLC4A8Q2Y0W8 1093 aa11.93□□□□□ -0.5
LINC01561-202ENST00000623529 RUFY3Q7L099 469 aa11.93□□□□□ -0.5
LINC01561-202ENST00000623529 SNX21Q969T3 373 aa11.93□□□□□ -0.5
LINC01561-202ENST00000623529 TEKT1Q969V4 418 aa11.93□□□□□ -0.5
LINC01561-202ENST00000623529 PRMT6Q96LA8 375 aaPredicted RBP11.93□□□□□ -0.5
LINC01561-202ENST00000623529 ZDHHC15Q96MV8 337 aa11.93□□□□□ -0.5
LINC01561-202ENST00000623529 NEK1Q96PY6 1258 aa11.93□□□□□ -0.5
LINC01561-202ENST00000623529 CRNKL1Q9BZJ0 848 aaKnown RBP11.93□□□□□ -0.5
LINC01561-202ENST00000623529 MINDY4BA8MYZ0 360 aa11.92□□□□□ -0.5
LINC01561-202ENST00000623529 CIAPIN1Q6FI81 312 aa11.92□□□□□ -0.5
LINC01561-202ENST00000623529 CDC42EP5Q6NZY7 148 aa11.92□□□□□ -0.5
LINC01561-202ENST00000623529 CHST3Q7LGC8 479 aa11.92□□□□□ -0.5
LINC01561-202ENST00000623529 MAPKAPK5Q8IW41 473 aa11.92□□□□□ -0.5
LINC01561-202ENST00000623529 SLF2Q8IX21 1173 aa11.92□□□□□ -0.5
LINC01561-202ENST00000623529 NACAP1Q9BZK3 213 aa11.92□□□□□ -0.5
LINC01561-202ENST00000623529 SLKQ9H2G2 1235 aaPredicted RBP11.92□□□□□ -0.5
LINC01561-202ENST00000623529 GRPEL1Q9HAV7 217 aa11.92□□□□□ -0.5
LINC01561-202ENST00000623529 ATP8A2Q9NTI2 1148 aa11.92□□□□□ -0.5
LINC01561-202ENST00000623529 ADAMTSL1Q8N6G6 1762 aa11.92□□□□□ -0.5
LINC01561-202ENST00000623529 WDHD1O75717 1129 aaPredicted RBP11.92□□□□□ -0.5
LINC01561-202ENST00000623529 CACNB3P54284 484 aa11.92□□□□□ -0.5
LINC01561-202ENST00000623529 CCDC173Q0VFZ6 552 aa11.92□□□□□ -0.5
LINC01561-202ENST00000623529 RBM46Q8TBY0 533 aaKnown RBP11.92□□□□□ -0.5
LINC01561-202ENST00000623529 DDX4Q9NQI0 724 aaKnown RBP11.92□□□□□ -0.5
LINC01561-202ENST00000623529 USP40Q9NVE5 1235 aa11.92□□□□□ -0.5
LINC01561-202ENST00000623529 BAZ2AQ9UIF9 1905 aaKnown RBP11.92□□□□□ -0.5
LINC01561-202ENST00000623529 ZMYM6O95789 1325 aa11.91□□□□□ -0.5
LINC01561-202ENST00000623529 USP5P45974 858 aa11.91□□□□□ -0.5
LINC01561-202ENST00000623529 RBM5P52756 815 aaKnown RBP eCLIP11.91□□□□□ -0.5
LINC01561-202ENST00000623529 HDLBPQ00341 1268 aaKnown RBP11.91□□□□□ -0.5
LINC01561-202ENST00000623529 EXOSC10Q01780 885 aaKnown RBP11.91□□□□□ -0.5
LINC01561-202ENST00000623529 PPARAQ07869 468 aa11.91□□□□□ -0.5
LINC01561-202ENST00000623529 NFIAQ12857 509 aa11.91□□□□□ -0.5
LINC01561-202ENST00000623529 HS1BP3Q53T59 392 aa11.91□□□□□ -0.5
LINC01561-202ENST00000623529 GIMAP6Q6P9H5 292 aa11.91□□□□□ -0.5
LINC01561-202ENST00000623529 SMAP1Q8IYB5 467 aaPredicted RBP11.91□□□□□ -0.5
LINC01561-202ENST00000623529 TEX11Q8IYF3 940 aa11.91□□□□□ -0.5
LINC01561-202ENST00000623529 LRRC2Q9BYS8 371 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms