RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 DNAH12Q6ZR08 3092 aa13.65□□□□□ -0.22
LINC00963-214ENST00000622680 CIAO1O76071 339 aa13.64□□□□□ -0.23
LINC00963-214ENST00000622680 BCRP11274 1271 aa13.64□□□□□ -0.23
LINC00963-214ENST00000622680 GRK4P32298 578 aa13.64□□□□□ -0.23
LINC00963-214ENST00000622680 PRMT2P55345 433 aa13.64□□□□□ -0.23
LINC00963-214ENST00000622680 PRKCZQ05513 592 aa13.64□□□□□ -0.23
LINC00963-214ENST00000622680 ALDH1L2Q3SY69 923 aa13.64□□□□□ -0.23
LINC00963-214ENST00000622680 SH3BP5LQ7L8J4 393 aa13.64□□□□□ -0.23
LINC00963-214ENST00000622680 PARK7Q99497 189 aaKnown RBP13.64□□□□□ -0.23
LINC00963-214ENST00000622680 GNL3LQ9NVN8 582 aaKnown RBP13.64□□□□□ -0.23
LINC00963-214ENST00000622680 DENND2AQ9ULE3 1009 aa13.64□□□□□ -0.23
LINC00963-214ENST00000622680 GAKO14976 1311 aa13.64□□□□□ -0.23
LINC00963-214ENST00000622680 PHF20L1A8MW92 1017 aa13.63□□□□□ -0.23
LINC00963-214ENST00000622680 CCL5P13501 91 aa13.63□□□□□ -0.23
LINC00963-214ENST00000622680 RASGRF1Q13972 1273 aa13.63□□□□□ -0.23
LINC00963-214ENST00000622680 CCDC102BQ68D86 513 aa13.63□□□□□ -0.23
LINC00963-214ENST00000622680 GADL1Q6ZQY3 521 aa13.63□□□□□ -0.23
LINC00963-214ENST00000622680 CCDC84Q86UT8 332 aaPredicted RBP13.63□□□□□ -0.23
LINC00963-214ENST00000622680 SCYL3Q8IZE3 742 aa13.63□□□□□ -0.23
LINC00963-214ENST00000622680 MEIS3Q99687 375 aa13.63□□□□□ -0.23
LINC00963-214ENST00000622680 DDX4Q9NQI0 724 aaKnown RBP13.63□□□□□ -0.23
LINC00963-214ENST00000622680 GABRQQ9UN88 632 aa13.63□□□□□ -0.23
LINC00963-214ENST00000622680 NAV1Q8NEY1 1877 aa13.63□□□□□ -0.23
LINC00963-214ENST00000622680 A0A0G2JLL6 359 aaPredicted RBP13.62□□□□□ -0.23
LINC00963-214ENST00000622680 DDTLA6NHG4 134 aaPredicted RBP13.62□□□□□ -0.23
LINC00963-214ENST00000622680 PTPRAP18433 802 aa13.62□□□□□ -0.23
LINC00963-214ENST00000622680 IL15P40933 162 aaPredicted RBP13.62□□□□□ -0.23
LINC00963-214ENST00000622680 PICALMQ13492 652 aa13.62□□□□□ -0.23
LINC00963-214ENST00000622680 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
LINC00963-214ENST00000622680 PRRT2Q7Z6L0 340 aaPredicted RBP13.62□□□□□ -0.23
LINC00963-214ENST00000622680 DZIP1Q86YF9 867 aaKnown RBP13.62□□□□□ -0.23
LINC00963-214ENST00000622680 ZSCAN29Q8IWY8 852 aaPredicted RBP13.62□□□□□ -0.23
LINC00963-214ENST00000622680 BIN2Q9UBW5 565 aaPredicted RBP13.62□□□□□ -0.23
LINC00963-214ENST00000622680 ABCF2Q9UG63 623 aa13.62□□□□□ -0.23
LINC00963-214ENST00000622680 FBXO3Q9UK99 471 aa13.62□□□□□ -0.23
LINC00963-214ENST00000622680 NOB1Q9ULX3 412 aaKnown RBP13.62□□□□□ -0.23
LINC00963-214ENST00000622680 ZHX2Q9Y6X8 837 aa13.62□□□□□ -0.23
LINC00963-214ENST00000622680 FAM196BA6NMK8 535 aa13.61□□□□□ -0.23
LINC00963-214ENST00000622680 SEMA3EO15041 775 aa13.61□□□□□ -0.23
LINC00963-214ENST00000622680 ENTPD3O75355 529 aa13.61□□□□□ -0.23
LINC00963-214ENST00000622680 HOXD10P28358 340 aa13.61□□□□□ -0.23
LINC00963-214ENST00000622680 BTDP43251 543 aa13.61□□□□□ -0.23
LINC00963-214ENST00000622680 FCGRTP55899 365 aa13.61□□□□□ -0.23
LINC00963-214ENST00000622680 IDI2Q9BXS1 227 aa13.61□□□□□ -0.23
LINC00963-214ENST00000622680 RNF208Q9H0X6 261 aa13.61□□□□□ -0.23
LINC00963-214ENST00000622680 UNC93B1Q9H1C4 597 aa13.61□□□□□ -0.23
LINC00963-214ENST00000622680 PICK1Q9NRD5 415 aa13.61□□□□□ -0.23
LINC00963-214ENST00000622680 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.61□□□□□ -0.23
LINC00963-214ENST00000622680 MROH7-TTC4A0A0A0MT08 1334 aa13.61□□□□□ -0.23
LINC00963-214ENST00000622680 LAMA2P24043 3122 aaKnown RBP13.6□□□□□ -0.23
LINC00963-214ENST00000622680 TRIM75PA6NK02 468 aa13.6□□□□□ -0.23
LINC00963-214ENST00000622680 CXCL11O14625 94 aa13.6□□□□□ -0.23
LINC00963-214ENST00000622680 ELNP15502 786 aa13.6□□□□□ -0.23
LINC00963-214ENST00000622680 GJA8P48165 433 aa13.6□□□□□ -0.23
LINC00963-214ENST00000622680 TIMM10P62072 90 aa13.6□□□□□ -0.23
LINC00963-214ENST00000622680 PI16Q6UXB8 463 aa13.6□□□□□ -0.23
LINC00963-214ENST00000622680 UBE2Q1Q7Z7E8 422 aa13.6□□□□□ -0.23
LINC00963-214ENST00000622680 ZGPATQ8N5A5 531 aaKnown RBP13.6□□□□□ -0.23
LINC00963-214ENST00000622680 DPF3Q92784 378 aa13.6□□□□□ -0.23
LINC00963-214ENST00000622680 COPRSQ9NQ92 184 aa13.6□□□□□ -0.23
LINC00963-214ENST00000622680 AFG3L2Q9Y4W6 797 aa13.6□□□□□ -0.23
LINC00963-214ENST00000622680 MYH7P12883 1935 aa13.6□□□□□ -0.23
LINC00963-214ENST00000622680 ZNFX1Q9P2E3 1918 aaKnown RBP13.59□□□□□ -0.23
LINC00963-214ENST00000622680 A0A1B0GUL7 405 aa13.59□□□□□ -0.23
LINC00963-214ENST00000622680 GJB1P08034 283 aa13.59□□□□□ -0.23
LINC00963-214ENST00000622680 MECOMQ03112 1051 aa13.59□□□□□ -0.23
LINC00963-214ENST00000622680 TFCP2Q12800 502 aa13.59□□□□□ -0.23
LINC00963-214ENST00000622680 ZNF384Q8TF68 577 aa13.59□□□□□ -0.23
LINC00963-214ENST00000622680 RBM27Q9P2N5 1060 aaKnown RBP13.59□□□□□ -0.23
LINC00963-214ENST00000622680 PDS5AQ29RF7 1337 aaKnown RBP13.59□□□□□ -0.23
LINC00963-214ENST00000622680 PARP14Q460N5 1801 aa13.58□□□□□ -0.24
LINC00963-214ENST00000622680 ADCY3O60266 1144 aa13.58□□□□□ -0.24
LINC00963-214ENST00000622680 FARP2O94887 1054 aaPredicted RBP13.58□□□□□ -0.24
LINC00963-214ENST00000622680 INHAP05111 366 aa13.58□□□□□ -0.24
LINC00963-214ENST00000622680 FLT3LGP49771 235 aa13.58□□□□□ -0.24
LINC00963-214ENST00000622680 UBXN2AP68543 259 aa13.58□□□□□ -0.24
LINC00963-214ENST00000622680 TREML2Q5T2D2 321 aa13.58□□□□□ -0.24
LINC00963-214ENST00000622680 FASTKD5Q7L8L6 764 aaKnown RBP13.58□□□□□ -0.24
LINC00963-214ENST00000622680 TRMT2AQ8IZ69 625 aaKnown RBP13.58□□□□□ -0.24
LINC00963-214ENST00000622680 SLAIN1Q8ND83 568 aa13.58□□□□□ -0.24
LINC00963-214ENST00000622680 NKX2-3Q8TAU0 364 aa13.58□□□□□ -0.24
LINC00963-214ENST00000622680 SMCR8Q8TEV9 937 aaPredicted RBP13.58□□□□□ -0.24
LINC00963-214ENST00000622680 U2AF1L4Q8WU68 220 aaKnown RBP13.58□□□□□ -0.24
LINC00963-214ENST00000622680 XAGE2Q96GT9 111 aa13.58□□□□□ -0.24
LINC00963-214ENST00000622680 TAOK2Q9UL54 1235 aa13.58□□□□□ -0.24
LINC00963-214ENST00000622680 COL2A1P02458 1487 aaPredicted RBP13.58□□□□□ -0.24
LINC00963-214ENST00000622680 CUL9Q8IWT3 2517 aa13.58□□□□□ -0.24
LINC00963-214ENST00000622680 BAZ2AQ9UIF9 1905 aaKnown RBP13.57□□□□□ -0.24
LINC00963-214ENST00000622680 TNPO2O14787 897 aaKnown RBP13.57□□□□□ -0.24
LINC00963-214ENST00000622680 CTNND1O60716 968 aaKnown RBP13.57□□□□□ -0.24
LINC00963-214ENST00000622680 RHBDL3P58872 404 aa13.57□□□□□ -0.24
LINC00963-214ENST00000622680 MAP3K10Q02779 954 aa13.57□□□□□ -0.24
LINC00963-214ENST00000622680 ANKRD13CQ8N6S4 541 aa13.57□□□□□ -0.24
LINC00963-214ENST00000622680 API5Q9BZZ5 524 aaKnown RBP13.57□□□□□ -0.24
LINC00963-214ENST00000622680 COL11A1P12107 1806 aaPredicted RBP13.57□□□□□ -0.24
LINC00963-214ENST00000622680 A0A0C4DFX4 3053 aa13.56□□□□□ -0.24
LINC00963-214ENST00000622680 SRGAP3O43295 1099 aa13.56□□□□□ -0.24
LINC00963-214ENST00000622680 SPTY2D1Q68D10 685 aaPredicted RBP13.56□□□□□ -0.24
LINC00963-214ENST00000622680 TBC1D9Q6ZT07 1266 aa13.56□□□□□ -0.24
LINC00963-214ENST00000622680 ERICH6Q7L0X2 663 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms