RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 MYH2Q9UKX2 1941 aa16.28■□□□□ 0.2
EPB42-210ENST00000622454 RXRBP28702 533 aa16.28■□□□□ 0.2
EPB42-210ENST00000622454 NTRK3Q16288 839 aa16.28■□□□□ 0.2
EPB42-210ENST00000622454 ZNF384Q8TF68 577 aa16.28■□□□□ 0.2
EPB42-210ENST00000622454 NSUN4Q96CB9 384 aaKnown RBP16.28■□□□□ 0.2
EPB42-210ENST00000622454 ALG1Q9BT22 464 aa16.28■□□□□ 0.2
EPB42-210ENST00000622454 BRIP1Q9BX63 1249 aa16.28■□□□□ 0.2
EPB42-210ENST00000622454 NID2Q14112 1375 aa16.28■□□□□ 0.2
EPB42-210ENST00000622454 MINDY4BA8MYZ0 360 aa16.27■□□□□ 0.2
EPB42-210ENST00000622454 ZBTB22O15209 634 aa16.27■□□□□ 0.2
EPB42-210ENST00000622454 GYS1P13807 737 aa16.27■□□□□ 0.2
EPB42-210ENST00000622454 IARSP41252 1262 aaKnown RBP16.27■□□□□ 0.2
EPB42-210ENST00000622454 WTAPQ15007 396 aa16.27■□□□□ 0.2
EPB42-210ENST00000622454 TMED8Q6PL24 325 aaPredicted RBP16.27■□□□□ 0.2
EPB42-210ENST00000622454 CCDC144CPQ8IYA2 1237 aa16.27■□□□□ 0.2
EPB42-210ENST00000622454 POLR3DP05423 398 aaPredicted RBP16.27■□□□□ 0.19
EPB42-210ENST00000622454 ME1P48163 572 aa16.27■□□□□ 0.19
EPB42-210ENST00000622454 MECOMQ03112 1051 aa16.27■□□□□ 0.19
EPB42-210ENST00000622454 GRAPQ13588 217 aa16.27■□□□□ 0.19
EPB42-210ENST00000622454 CCAR1Q8IX12 1150 aaKnown RBP16.27■□□□□ 0.19
EPB42-210ENST00000622454 GRAPLQ8TC17 118 aaPredicted RBP16.27■□□□□ 0.19
EPB42-210ENST00000622454 PHKBQ93100 1093 aa16.27■□□□□ 0.19
EPB42-210ENST00000622454 MYL10Q9BUA6 226 aa16.27■□□□□ 0.19
EPB42-210ENST00000622454 GJB4Q9NTQ9 266 aa16.27■□□□□ 0.19
EPB42-210ENST00000622454 FAM217BQ9NTX9 383 aaPredicted RBP16.27■□□□□ 0.19
EPB42-210ENST00000622454 POLR3EQ9NVU0 708 aa16.27■□□□□ 0.19
EPB42-210ENST00000622454 APBA3O96018 575 aa16.26■□□□□ 0.19
EPB42-210ENST00000622454 DYNLL1P63167 89 aaKnown RBP16.26■□□□□ 0.19
EPB42-210ENST00000622454 KIF23Q02241 960 aaPredicted RBP16.26■□□□□ 0.19
EPB42-210ENST00000622454 TYRO3Q06418 890 aa16.26■□□□□ 0.19
EPB42-210ENST00000622454 MYSM1Q5VVJ2 828 aa16.26■□□□□ 0.19
EPB42-210ENST00000622454 CKAP2LQ8IYA6 745 aa16.26■□□□□ 0.19
EPB42-210ENST00000622454 STK11IPQ8N1F8 1099 aa16.26■□□□□ 0.19
EPB42-210ENST00000622454 ESR2Q92731 530 aa16.26■□□□□ 0.19
EPB42-210ENST00000622454 ZKSCAN3Q9BRR0 538 aa16.26■□□□□ 0.19
EPB42-210ENST00000622454 UBAC1Q9BSL1 405 aa16.26■□□□□ 0.19
EPB42-210ENST00000622454 RCAN1P53805 252 aa16.26■□□□□ 0.19
EPB42-210ENST00000622454 CCDC73Q6ZRK6 1079 aa16.26■□□□□ 0.19
EPB42-210ENST00000622454 TXNRD3Q86VQ6 643 aa16.26■□□□□ 0.19
EPB42-210ENST00000622454 ANKIB1Q9P2G1 1089 aa16.26■□□□□ 0.19
EPB42-210ENST00000622454 KIAA1551Q9HCM1 1747 aa16.26■□□□□ 0.19
EPB42-210ENST00000622454 STK36Q9NRP7 1315 aa16.26■□□□□ 0.19
EPB42-210ENST00000622454 IRS2Q9Y4H2 1338 aa16.26■□□□□ 0.19
EPB42-210ENST00000622454 RANBP6O60518 1105 aaKnown RBP16.25■□□□□ 0.19
EPB42-210ENST00000622454 YEATS4O95619 227 aa16.25■□□□□ 0.19
EPB42-210ENST00000622454 PCP11498 1178 aaKnown RBP16.25■□□□□ 0.19
EPB42-210ENST00000622454 CHAF1AQ13111 956 aaPredicted RBP16.25■□□□□ 0.19
EPB42-210ENST00000622454 LINC00301Q8NCQ3 95 aa16.25■□□□□ 0.19
EPB42-210ENST00000622454 AIFM3Q96NN9 605 aa16.25■□□□□ 0.19
EPB42-210ENST00000622454 CCDC39Q9UFE4 941 aa16.25■□□□□ 0.19
EPB42-210ENST00000622454 USP25Q9UHP3 1055 aa16.25■□□□□ 0.19
EPB42-210ENST00000622454 LEMD3Q9Y2U8 911 aa16.25■□□□□ 0.19
EPB42-210ENST00000622454 DUOX1Q9NRD9 1551 aa16.25■□□□□ 0.19
EPB42-210ENST00000622454 KIF28PB7ZC32 967 aa16.25■□□□□ 0.19
EPB42-210ENST00000622454 IFNAR1P17181 557 aa16.25■□□□□ 0.19
EPB42-210ENST00000622454 SSRP1Q08945 709 aaKnown RBP16.25■□□□□ 0.19
EPB42-210ENST00000622454 TRIM29Q14134 588 aa16.25■□□□□ 0.19
EPB42-210ENST00000622454 KRT40Q6A162 431 aa16.25■□□□□ 0.19
EPB42-210ENST00000622454 PRR5LQ6MZQ0 368 aa16.25■□□□□ 0.19
EPB42-210ENST00000622454 FAM200AQ8TCP9 573 aa16.25■□□□□ 0.19
EPB42-210ENST00000622454 KCNG4Q8TDN1 519 aa16.25■□□□□ 0.19
EPB42-210ENST00000622454 MRVI1Q9Y6F6 885 aa16.25■□□□□ 0.19
EPB42-210ENST00000622454 LAMB1P07942 1786 aa16.24■□□□□ 0.19
EPB42-210ENST00000622454 CCDC196A0A1B0GTZ2 297 aa16.24■□□□□ 0.19
EPB42-210ENST00000622454 CTAGE5O15320 804 aa16.24■□□□□ 0.19
EPB42-210ENST00000622454 MSNP26038 577 aaKnown RBP16.24■□□□□ 0.19
EPB42-210ENST00000622454 PRDX5P30044 214 aa16.24■□□□□ 0.19
EPB42-210ENST00000622454 FAM160A1Q05DH4 1040 aa16.24■□□□□ 0.19
EPB42-210ENST00000622454 STK38Q15208 465 aa16.24■□□□□ 0.19
EPB42-210ENST00000622454 SPTY2D1Q68D10 685 aaPredicted RBP16.24■□□□□ 0.19
EPB42-210ENST00000622454 ADALQ6DHV7 355 aa16.24■□□□□ 0.19
EPB42-210ENST00000622454 WASF1Q92558 559 aa16.24■□□□□ 0.19
EPB42-210ENST00000622454 NOL7Q9UMY1 257 aaKnown RBP16.24■□□□□ 0.19
EPB42-210ENST00000622454 PCDHA7Q9UN72 937 aa16.24■□□□□ 0.19
EPB42-210ENST00000622454 CLIC4Q9Y696 253 aa16.24■□□□□ 0.19
EPB42-210ENST00000622454 MYH6P13533 1939 aa16.24■□□□□ 0.19
EPB42-210ENST00000622454 FMNL1O95466 1100 aaPredicted RBP16.23■□□□□ 0.19
EPB42-210ENST00000622454 SF3A1Q15459 793 aaKnown RBP16.23■□□□□ 0.19
EPB42-210ENST00000622454 RTN1Q16799 776 aa16.23■□□□□ 0.19
EPB42-210ENST00000622454 SASS6Q6UVJ0 657 aa16.23■□□□□ 0.19
EPB42-210ENST00000622454 SLC26A6Q9BXS9 759 aa16.23■□□□□ 0.19
EPB42-210ENST00000622454 CRNKL1Q9BZJ0 848 aaKnown RBP16.23■□□□□ 0.19
EPB42-210ENST00000622454 GOLPH3LQ9H4A5 285 aa16.23■□□□□ 0.19
EPB42-210ENST00000622454 XDHP47989 1333 aa16.23■□□□□ 0.19
EPB42-210ENST00000622454 A0A1W2PQ27 194 aa16.23■□□□□ 0.19
EPB42-210ENST00000622454 A0A1W2PQ64 194 aa16.23■□□□□ 0.19
EPB42-210ENST00000622454 A0A1W2PQD8 194 aa16.23■□□□□ 0.19
EPB42-210ENST00000622454 PLSCR1O15162 318 aa16.23■□□□□ 0.19
EPB42-210ENST00000622454 IGSF3O75054 1194 aa16.23■□□□□ 0.19
EPB42-210ENST00000622454 HMGB2P26583 209 aaKnown RBP16.23■□□□□ 0.19
EPB42-210ENST00000622454 SNW1Q13573 536 aaKnown RBP16.23■□□□□ 0.19
EPB42-210ENST00000622454 CTR9Q6PD62 1173 aa16.23■□□□□ 0.19
EPB42-210ENST00000622454 TRIM22Q8IYM9 498 aa16.23■□□□□ 0.19
EPB42-210ENST00000622454 ENGASEQ8NFI3 743 aa16.23■□□□□ 0.19
EPB42-210ENST00000622454 RPGRQ92834 1020 aaKnown RBP16.23■□□□□ 0.19
EPB42-210ENST00000622454 AATFQ9NY61 560 aaKnown RBP eCLIP16.23■□□□□ 0.19
EPB42-210ENST00000622454 TNKSO95271 1327 aa16.23■□□□□ 0.19
EPB42-210ENST00000622454 SPTLC2O15270 562 aa16.22■□□□□ 0.19
EPB42-210ENST00000622454 KINO60870 393 aaKnown RBP16.22■□□□□ 0.19
EPB42-210ENST00000622454 ADCY5O95622 1261 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms