RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 KIAA1328Q86T90 577 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 KCNH5Q8NCM2 988 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 TMX4Q9H1E5 349 aaPredicted RBP8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 DDX21Q9NR30 783 aaKnown RBP eCLIP8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 HOMER3Q9NSC5 361 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 ANO10Q9NW15 660 aa8.55□□□□□ -1.04
TRIM49B-202ENST00000622138 NEURL1BA8MQ27 555 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 PES1O00541 588 aaKnown RBP8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 MYL6BP14649 208 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 RPS6KA3P51812 740 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 CLNS1AP54105 237 aaKnown RBP8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 CCDC129Q6ZRS4 1044 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 DHX40Q8IX18 779 aaKnown RBP8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 CEP57L1Q8IYX8 460 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 KLHL23Q8NBE8 558 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 MAGEC3Q8TD91 643 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 CCDC102AQ96A19 550 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 EPC1Q9H2F5 836 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 IRAK4Q9NWZ3 460 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 TRPM3Q9HCF6 1732 aaPredicted RBP8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 ZNF609O15014 1411 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 FANCGO15287 622 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 N4BP1O75113 896 aaKnown RBP8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 RNF40O75150 1001 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 TAF5LO75529 589 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 ARHGAP25P42331 645 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 TUBB2AQ13885 445 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 CASP8Q14790 479 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 KIF4BQ2VIQ3 1234 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 BLOC1S2Q6QNY1 142 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 CCDC50Q8IVM0 306 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 XAGE3Q8WTP9 111 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 TUBB2BQ9BVA1 445 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 NAT10Q9H0A0 1025 aaKnown RBP8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 ATP6V0A4Q9HBG4 840 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 BATF3Q9NR55 127 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 TFIP11Q9UBB9 837 aaKnown RBP8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 DBNLQ9UJU6 430 aaKnown RBP8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 CAPN7Q9Y6W3 813 aa8.54□□□□□ -1.04
TRIM49B-202ENST00000622138 MAFGO15525 162 aa8.53□□□□□ -1.04
TRIM49B-202ENST00000622138 CAND2O75155 1236 aa8.53□□□□□ -1.04
TRIM49B-202ENST00000622138 PRPF6O94906 941 aaKnown RBP8.53□□□□□ -1.04
TRIM49B-202ENST00000622138 PDCP20941 246 aa8.53□□□□□ -1.04
TRIM49B-202ENST00000622138 GCKP35557 465 aa8.53□□□□□ -1.04
TRIM49B-202ENST00000622138 RFX5P48382 616 aaPredicted RBP8.53□□□□□ -1.04
TRIM49B-202ENST00000622138 CCT5P48643 541 aa8.53□□□□□ -1.04
TRIM49B-202ENST00000622138 GCKRQ14397 625 aa8.53□□□□□ -1.04
TRIM49B-202ENST00000622138 LMOD2Q6P5Q4 547 aa8.53□□□□□ -1.04
TRIM49B-202ENST00000622138 TMC6Q7Z403 805 aa8.53□□□□□ -1.04
TRIM49B-202ENST00000622138 SRGAP1Q7Z6B7 1085 aa8.53□□□□□ -1.04
TRIM49B-202ENST00000622138 MICAL1Q8TDZ2 1067 aa8.53□□□□□ -1.04
TRIM49B-202ENST00000622138 SPATA32Q96LK8 384 aa8.53□□□□□ -1.04
TRIM49B-202ENST00000622138 MYD88Q99836 296 aa8.53□□□□□ -1.04
TRIM49B-202ENST00000622138 PLEKHA4Q9H4M7 779 aa8.53□□□□□ -1.04
TRIM49B-202ENST00000622138 ANKZF1Q9H8Y5 726 aa8.53□□□□□ -1.04
TRIM49B-202ENST00000622138 HIP1O00291 1037 aa8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 KIAA0754O94854 1291 aa8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 EZRP15311 586 aaKnown RBP8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 PECAM1P16284 738 aaPredicted RBP8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 PSMA5P28066 241 aa8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 RBM5P52756 815 aaKnown RBP eCLIP8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 CHMP4BP1P59074 171 aa8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 CDCA2Q69YH5 1023 aaPredicted RBP8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 B4GALNT4Q76KP1 1039 aa8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 LRP10Q7Z4F1 713 aa8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 RIC3Q7Z5B4 369 aa8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 MAB21L3Q8N8X9 362 aa8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 DRAXINQ8NBI3 349 aaPredicted RBP8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 LEO1Q8WVC0 666 aaPredicted RBP8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 TCP11Q8WWU5 503 aa8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 PGBD1Q96JS3 809 aa8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 CLIC6Q96NY7 704 aa8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 SEC62Q99442 399 aaKnown RBP8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 BPIFA3Q9BQP9 254 aa8.52□□□□□ -1.04
TRIM49B-202ENST00000622138 LMTK3Q96Q04 1460 aa8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 SCN11AQ9UI33 1791 aa8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 CDHR2Q9BYE9 1310 aa8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 VWA3AA6NCI4 1184 aa8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 A6NNZ2 444 aa8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 NR1I2O75469 434 aa8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 TFCP2Q12800 502 aa8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 RESTQ13127 1097 aa8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 TUBB8Q3ZCM7 444 aa8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 FILIP1LQ4L180 1135 aa8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 CEP85LQ5SZL2 805 aa8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 COPS6Q7L5N1 327 aa8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 YTHDF3Q7Z739 585 aaKnown RBP8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 SMARCC1Q92922 1105 aaPredicted RBP8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 KIFC2Q96AC6 838 aa8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 PAGR1Q9BTK6 254 aa8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 SUDS3Q9H7L9 328 aaPredicted RBP8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 CD248Q9HCU0 757 aa8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 MYO6Q9UM54 1294 aa8.52□□□□□ -1.05
TRIM49B-202ENST00000622138 GLI3P10071 1580 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 MEGF6O75095 1541 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 DDX58O95786 925 aaKnown RBP8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 SETSIPP0DME0 302 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 SMTNP53814 917 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 TNNI3KQ59H18 835 aa8.51□□□□□ -1.05
TRIM49B-202ENST00000622138 USPL1Q5W0Q7 1092 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms