RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 NXNQ6DKJ4 435 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 RSPH3Q86UC2 560 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 CCDC105Q8IYK2 499 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 IWS1Q96ST2 819 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 KRT2P35908 639 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 BCAP29Q9UHQ4 241 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 INTUQ9ULD6 942 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 ERICH3Q5RHP9 1530 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 GUCY2CP25092 1073 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 IFIT5Q13325 482 aaKnown RBP12.9□□□□□ -0.34
CLTC-215ENST00000621829 PLS1Q14651 629 aa12.9□□□□□ -0.34
CLTC-215ENST00000621829 RXRAP19793 462 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 ZBTB22O15209 634 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 ERMNQ8TAM6 284 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 INTS4Q96HW7 963 aaKnown RBP12.89□□□□□ -0.35
CLTC-215ENST00000621829 CLSTN2Q9H4D0 955 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 SEPT10Q9P0V9 454 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 SLC5A1P13866 664 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 PDCD2Q16342 344 aaPredicted RBP12.89□□□□□ -0.35
CLTC-215ENST00000621829 CROCCP2Q86T23 111 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 CENPKQ9BS16 269 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 LMBRD1Q9NUN5 540 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 PTPDC1A2A3K4 754 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 PCYT1AP49585 367 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 RAD51AP2Q09MP3 1159 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 FBXO41Q8TF61 875 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 ATAD2Q6PL18 1390 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 SBNO2Q9Y2G9 1366 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 VWA3AA6NCI4 1184 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 POLR2DO15514 142 aaKnown RBP12.89□□□□□ -0.35
CLTC-215ENST00000621829 AFAP1L2Q8N4X5 818 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 TMEM63CQ9P1W3 806 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 CHMP2AO43633 222 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 LRRC8AQ8IWT6 810 aa12.89□□□□□ -0.35
CLTC-215ENST00000621829 EIF4E1BA6NMX2 242 aaKnown RBP12.88□□□□□ -0.35
CLTC-215ENST00000621829 CPA1P15085 419 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 SKOR1P84550 965 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 GRAMD4Q6IC98 578 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 MAP3K2Q9Y2U5 619 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 ZBBXA8MT70 800 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 USP37Q86T82 979 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 SCYL3Q8IZE3 742 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 CCDC197Q8NCU1 140 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 SUFUQ9UMX1 484 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 DTNBO60941 627 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 VPS37BQ9H9H4 285 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 PDHA1P08559 390 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 CALM1P0DP23 149 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 CALM2P0DP24 149 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 CALM3P0DP25 149 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 MAN1A1P33908 653 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 UHMK1Q8TAS1 419 aaKnown RBP12.88□□□□□ -0.35
CLTC-215ENST00000621829 KIFC2Q96AC6 838 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 TRIM6Q9C030 488 aaPredicted RBP12.88□□□□□ -0.35
CLTC-215ENST00000621829 XPO4Q9C0E2 1151 aaKnown RBP12.88□□□□□ -0.35
CLTC-215ENST00000621829 PDE4BQ07343 736 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 PTPROQ16827 1216 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 ESCO1Q5FWF5 840 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 ANKIB1Q9P2G1 1089 aa12.88□□□□□ -0.35
CLTC-215ENST00000621829 TNFAIP3P21580 790 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 TMTC1Q8IUR5 882 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 ZPR1O75312 459 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 MAGEA9P43362 315 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 CCDC93Q567U6 631 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 CASC4Q6P4E1 433 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 USP26Q9BXU7 913 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 IFNAR2P48551 515 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 NLRP12P59046 1061 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 TOM1L2Q6ZVM7 507 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 ZNF711Q9Y462 761 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 HNRNPCP07910 306 aaKnown RBP eCLIP12.87□□□□□ -0.353e-8■■□□□ 13.9
CLTC-215ENST00000621829 CREB3L3Q68CJ9 461 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 PPP4R1Q8TF05 950 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 JARID2Q92833 1246 aaPredicted RBP12.87□□□□□ -0.35
CLTC-215ENST00000621829 STAC3Q96MF2 364 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 DTHD1Q6ZMT9 781 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 ARMC9Q7Z3E5 817 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 HDAC9Q9UKV0 1011 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 STX8Q9UNK0 236 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 TRAF5O00463 557 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 NACADO15069 1562 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 MAP3K7O43318 606 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 EEF1DP29692 281 aaKnown RBP12.87□□□□□ -0.35
CLTC-215ENST00000621829 NMIQ13287 307 aaPredicted RBP12.87□□□□□ -0.35
CLTC-215ENST00000621829 RCN2Q14257 317 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 RPS6KA1Q15418 735 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 MCMDC2Q4G0Z9 681 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 IMPG2Q9BZV3 1241 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 RAB17Q9H0T7 212 aa12.87□□□□□ -0.35
CLTC-215ENST00000621829 TYW1BQ6NUM6 668 aa12.86□□□□□ -0.35
CLTC-215ENST00000621829 FAM173BQ6P4H8 233 aa12.86□□□□□ -0.35
CLTC-215ENST00000621829 ATG3Q9NT62 314 aa12.86□□□□□ -0.35
CLTC-215ENST00000621829 PYCARDQ9ULZ3 195 aa12.86□□□□□ -0.35
CLTC-215ENST00000621829 ZMYND10O75800 440 aa12.86□□□□□ -0.35
CLTC-215ENST00000621829 C16orf87Q6PH81 154 aa12.86□□□□□ -0.35
CLTC-215ENST00000621829 FNBP4Q8N3X1 1017 aaPredicted RBP12.86□□□□□ -0.35
CLTC-215ENST00000621829 ESRRGP62508 458 aa12.86□□□□□ -0.35
CLTC-215ENST00000621829 IL1RL1Q01638 556 aa12.86□□□□□ -0.35
CLTC-215ENST00000621829 MYO1CO00159 1063 aa12.86□□□□□ -0.35
CLTC-215ENST00000621829 SUN1O94901 812 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms