RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 DDTLA6NHG4 134 aaPredicted RBP17.3■□□□□ 0.36
CBWD3-217ENST00000621474 TGFBRAP1Q8WUH2 860 aa17.3■□□□□ 0.36
CBWD3-217ENST00000621474 OSBP2Q969R2 916 aa17.3■□□□□ 0.36
CBWD3-217ENST00000621474 MAGEB6P1A0A0J9YX57 407 aa17.29■□□□□ 0.36
CBWD3-217ENST00000621474 RNF113AO15541 343 aaKnown RBP17.29■□□□□ 0.36
CBWD3-217ENST00000621474 PLCG2P16885 1265 aa17.29■□□□□ 0.36
CBWD3-217ENST00000621474 ZSCAN25Q6NSZ9 544 aa17.29■□□□□ 0.36
CBWD3-217ENST00000621474 NOL10Q9BSC4 688 aaKnown RBP17.29■□□□□ 0.36
CBWD3-217ENST00000621474 FSD1Q9BTV5 496 aa17.29■□□□□ 0.36
CBWD3-217ENST00000621474 OSBPL5Q9H0X9 879 aaPredicted RBP17.29■□□□□ 0.36
CBWD3-217ENST00000621474 PPP4R2Q9NY27 417 aa17.29■□□□□ 0.36
CBWD3-217ENST00000621474 MKRN1Q9UHC7 482 aaKnown RBP17.29■□□□□ 0.36
CBWD3-217ENST00000621474 RASSF10A6NK89 507 aa17.29■□□□□ 0.36
CBWD3-217ENST00000621474 SLURP2P0DP57 97 aa17.29■□□□□ 0.36
CBWD3-217ENST00000621474 FKBP1BP68106 108 aa17.29■□□□□ 0.36
CBWD3-217ENST00000621474 PRKG1Q13976 671 aa17.29■□□□□ 0.36
CBWD3-217ENST00000621474 MAP3K11Q16584 847 aa17.29■□□□□ 0.36
CBWD3-217ENST00000621474 SUPT20HL1Q3ZLR7 823 aa17.29■□□□□ 0.36
CBWD3-217ENST00000621474 DNAJC5GQ8N7S2 189 aa17.29■□□□□ 0.36
CBWD3-217ENST00000621474 APPBP2Q92624 585 aa17.29■□□□□ 0.36
CBWD3-217ENST00000621474 ARMT1Q9H993 441 aa17.29■□□□□ 0.36
CBWD3-217ENST00000621474 ABT1Q9ULW3 272 aaKnown RBP17.29■□□□□ 0.36
CBWD3-217ENST00000621474 USP2O75604 605 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-217ENST00000621474 MBD4O95243 580 aa17.28■□□□□ 0.36
CBWD3-217ENST00000621474 ZFYP08048 801 aaPredicted RBP17.28■□□□□ 0.36
CBWD3-217ENST00000621474 TTC22Q5TAA0 569 aa17.28■□□□□ 0.36
CBWD3-217ENST00000621474 CERS3Q8IU89 383 aa17.28■□□□□ 0.36
CBWD3-217ENST00000621474 MAPKAPK5Q8IW41 473 aa17.28■□□□□ 0.36
CBWD3-217ENST00000621474 C2orf69Q8N8R5 385 aa17.28■□□□□ 0.36
CBWD3-217ENST00000621474 SEC62Q99442 399 aaKnown RBP17.28■□□□□ 0.36
CBWD3-217ENST00000621474 NF2P35240 595 aa17.27■□□□□ 0.36
CBWD3-217ENST00000621474 HUNKP57058 714 aa17.27■□□□□ 0.36
CBWD3-217ENST00000621474 ZMYM1Q5SVZ6 1142 aa17.27■□□□□ 0.36
CBWD3-217ENST00000621474 SDR42E1Q8WUS8 393 aa17.27■□□□□ 0.36
CBWD3-217ENST00000621474 TRIM6-TRIM34B2RNG4 842 aa17.26■□□□□ 0.35
CBWD3-217ENST00000621474 M0R2C6 588 aa17.26■□□□□ 0.35
CBWD3-217ENST00000621474 PRKAB2O43741 272 aa17.26■□□□□ 0.35
CBWD3-217ENST00000621474 RILPL2Q969X0 211 aa17.26■□□□□ 0.35
CBWD3-217ENST00000621474 HHIPL1Q96JK4 782 aa17.26■□□□□ 0.35
CBWD3-217ENST00000621474 CSRNP1Q96S65 589 aa17.26■□□□□ 0.35
CBWD3-217ENST00000621474 THSD7BQ9C0I4 1608 aa17.26■□□□□ 0.35
CBWD3-217ENST00000621474 UBE2Q2LH0YL09 131 aa17.25■□□□□ 0.35
CBWD3-217ENST00000621474 MAP3K10Q02779 954 aa17.25■□□□□ 0.35
CBWD3-217ENST00000621474 LDLRAD1Q5T700 205 aa17.25■□□□□ 0.35
CBWD3-217ENST00000621474 MIGA2Q7L4E1 593 aa17.25■□□□□ 0.35
CBWD3-217ENST00000621474 STRBPQ96SI9 672 aaKnown RBP17.25■□□□□ 0.35
CBWD3-217ENST00000621474 ANGEL1Q9UNK9 670 aaKnown RBP17.25■□□□□ 0.35
CBWD3-217ENST00000621474 LAMB1P07942 1786 aa17.25■□□□□ 0.35
CBWD3-217ENST00000621474 EVX2Q03828 476 aa17.25■□□□□ 0.35
CBWD3-217ENST00000621474 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.25■□□□□ 0.35
CBWD3-217ENST00000621474 AIDAQ96BJ3 306 aa17.25■□□□□ 0.35
CBWD3-217ENST00000621474 KLRG1Q96E93 195 aa17.25■□□□□ 0.35
CBWD3-217ENST00000621474 DCP1AQ9NPI6 582 aaPredicted RBP17.25■□□□□ 0.35
CBWD3-217ENST00000621474 PALD1Q9ULE6 856 aa17.25■□□□□ 0.35
CBWD3-217ENST00000621474 A0A0D9SFI3 127 aa17.24■□□□□ 0.35
CBWD3-217ENST00000621474 GPAA1O43292 621 aa17.24■□□□□ 0.35
CBWD3-217ENST00000621474 PPP1R12BO60237 982 aaPredicted RBP17.24■□□□□ 0.35
CBWD3-217ENST00000621474 SDSP20132 328 aa17.24■□□□□ 0.35
CBWD3-217ENST00000621474 USP5P45974 858 aa17.24■□□□□ 0.35
CBWD3-217ENST00000621474 TTLL12Q14166 644 aaPredicted RBP17.24■□□□□ 0.35
CBWD3-217ENST00000621474 DEFB115Q30KQ5 88 aa17.24■□□□□ 0.35
CBWD3-217ENST00000621474 LRRFIP1Q32MZ4 808 aaKnown RBP17.24■□□□□ 0.35
CBWD3-217ENST00000621474 ARMC9Q7Z3E5 817 aa17.24■□□□□ 0.35
CBWD3-217ENST00000621474 TICAM2Q86XR7 235 aa17.24■□□□□ 0.35
CBWD3-217ENST00000621474 ZSCAN29Q8IWY8 852 aaPredicted RBP17.24■□□□□ 0.35
CBWD3-217ENST00000621474 FAM227BQ96M60 508 aa17.24■□□□□ 0.35
CBWD3-217ENST00000621474 CRNKL1Q9BZJ0 848 aaKnown RBP17.24■□□□□ 0.35
CBWD3-217ENST00000621474 DNAJC18Q9H819 358 aa17.24■□□□□ 0.35
CBWD3-217ENST00000621474 CYP4F22Q6NT55 531 aa17.23■□□□□ 0.35
CBWD3-217ENST00000621474 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.23■□□□□ 0.35
CBWD3-217ENST00000621474 CLMNQ96JQ2 1002 aa17.23■□□□□ 0.35
CBWD3-217ENST00000621474 SAP30BPQ9UHR5 308 aaKnown RBP17.23■□□□□ 0.35
CBWD3-217ENST00000621474 ATAD5Q96QE3 1844 aa17.22■□□□□ 0.35
CBWD3-217ENST00000621474 FAM196BA6NMK8 535 aa17.22■□□□□ 0.35
CBWD3-217ENST00000621474 PHF20L1A8MW92 1017 aa17.22■□□□□ 0.35
CBWD3-217ENST00000621474 FAM155AB1AL88 458 aaPredicted RBP17.22■□□□□ 0.35
CBWD3-217ENST00000621474 FOXP2O15409 715 aa17.22■□□□□ 0.35
CBWD3-217ENST00000621474 VEGFBP49765 207 aa17.22■□□□□ 0.35
CBWD3-217ENST00000621474 SLC4A8Q2Y0W8 1093 aa17.22■□□□□ 0.35
CBWD3-217ENST00000621474 RGMBQ6NW40 437 aa17.22■□□□□ 0.35
CBWD3-217ENST00000621474 CCDC129Q6ZRS4 1044 aa17.22■□□□□ 0.35
CBWD3-217ENST00000621474 METTL16Q86W50 562 aaKnown RBP17.22■□□□□ 0.35
CBWD3-217ENST00000621474 DHX36Q9H2U1 1008 aaKnown RBP17.22■□□□□ 0.35
CBWD3-217ENST00000621474 ZNF112Q9UJU3 913 aa17.22■□□□□ 0.35
CBWD3-217ENST00000621474 DOCK1Q14185 1865 aa17.22■□□□□ 0.35
CBWD3-217ENST00000621474 GSG1L2A8MUP6 293 aa17.21■□□□□ 0.35
CBWD3-217ENST00000621474 TBC1D12O60347 775 aa17.21■□□□□ 0.35
CBWD3-217ENST00000621474 IREB2P48200 963 aaKnown RBP17.21■□□□□ 0.35
CBWD3-217ENST00000621474 NMIQ13287 307 aaPredicted RBP17.21■□□□□ 0.35
CBWD3-217ENST00000621474 HOOK2Q96ED9 719 aa17.21■□□□□ 0.35
CBWD3-217ENST00000621474 EPB41L4AQ9HCS5 686 aaPredicted RBP17.21■□□□□ 0.35
CBWD3-217ENST00000621474 SLC4A4Q9Y6R1 1079 aa17.21■□□□□ 0.35
CBWD3-217ENST00000621474 SMIM22K7EJ46 135 aa17.21■□□□□ 0.35
CBWD3-217ENST00000621474 INPP5BP32019 993 aa17.21■□□□□ 0.35
CBWD3-217ENST00000621474 PLCD1P51178 756 aa17.21■□□□□ 0.35
CBWD3-217ENST00000621474 VGLL4Q14135 290 aa17.21■□□□□ 0.35
CBWD3-217ENST00000621474 DCAF15Q66K64 600 aa17.21■□□□□ 0.35
CBWD3-217ENST00000621474 ZNF589Q86UQ0 364 aaPredicted RBP17.21■□□□□ 0.35
CBWD3-217ENST00000621474 RASAL3Q86YV0 1011 aa17.21■□□□□ 0.35
CBWD3-217ENST00000621474 PHIPQ8WWQ0 1821 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms