RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 PTPN22Q9Y2R2 807 aa29.53■■■□□ 2.32
ATXN3-253ENST00000621269 AK9Q5TCS8 1911 aa29.52■■■□□ 2.32
ATXN3-253ENST00000621269 TNNI3KQ59H18 835 aa29.52■■■□□ 2.32
ATXN3-253ENST00000621269 CCDC158Q5M9N0 1113 aa29.52■■■□□ 2.32
ATXN3-253ENST00000621269 TTC39AQ5SRH9 613 aa29.52■■■□□ 2.32
ATXN3-253ENST00000621269 LRP2BPQ9P2M1 347 aa29.52■■■□□ 2.32
ATXN3-253ENST00000621269 FPGT-TNNI3KV9GXZ4 949 aa29.52■■■□□ 2.32
ATXN3-253ENST00000621269 MCAMP43121 646 aa29.51■■■□□ 2.31
ATXN3-253ENST00000621269 NSUN4Q96CB9 384 aaKnown RBP29.51■■■□□ 2.31
ATXN3-253ENST00000621269 RFX7Q2KHR2 1363 aa29.51■■■□□ 2.31
ATXN3-253ENST00000621269 TLR2O60603 784 aa29.5■■■□□ 2.31
ATXN3-253ENST00000621269 SH3BP5LQ7L8J4 393 aa29.5■■■□□ 2.31
ATXN3-253ENST00000621269 ZNF384Q8TF68 577 aa29.5■■■□□ 2.31
ATXN3-253ENST00000621269 DDX4Q9NQI0 724 aaKnown RBP29.5■■■□□ 2.31
ATXN3-253ENST00000621269 KCNH4Q9UQ05 1017 aa29.5■■■□□ 2.31
ATXN3-253ENST00000621269 DDTLA6NHG4 134 aaPredicted RBP29.49■■■□□ 2.31
ATXN3-253ENST00000621269 MAP4K4O95819 1239 aaPredicted RBP29.49■■■□□ 2.31
ATXN3-253ENST00000621269 PICK1Q9NRD5 415 aa29.49■■■□□ 2.31
ATXN3-253ENST00000621269 ATRNL1Q5VV63 1379 aa29.49■■■□□ 2.31
ATXN3-253ENST00000621269 PHF20L1A8MW92 1017 aa29.48■■■□□ 2.31
ATXN3-253ENST00000621269 RHBDL3P58872 404 aa29.48■■■□□ 2.31
ATXN3-253ENST00000621269 ANKRD23Q86SG2 305 aa29.48■■■□□ 2.31
ATXN3-253ENST00000621269 SCYL3Q8IZE3 742 aa29.48■■■□□ 2.31
ATXN3-253ENST00000621269 DBNDD2Q9BQY9 259 aa29.48■■■□□ 2.31
ATXN3-253ENST00000621269 KIF22Q14807 665 aa29.47■■■□□ 2.31
ATXN3-253ENST00000621269 NOL10Q9BSC4 688 aaKnown RBP29.47■■■□□ 2.31
ATXN3-253ENST00000621269 SNRKQ9NRH2 765 aa29.47■■■□□ 2.31
ATXN3-253ENST00000621269 NOP58Q9Y2X3 529 aaKnown RBP29.47■■■□□ 2.31
ATXN3-253ENST00000621269 NPM3O75607 178 aaKnown RBP29.46■■■□□ 2.31
ATXN3-253ENST00000621269 MAP3K10Q02779 954 aa29.46■■■□□ 2.31
ATXN3-253ENST00000621269 DOCK2Q92608 1830 aa29.45■■■□□ 2.31
ATXN3-253ENST00000621269 PDHXO00330 501 aa29.45■■■□□ 2.31
ATXN3-253ENST00000621269 CXCL11O14625 94 aa29.45■■■□□ 2.31
ATXN3-253ENST00000621269 CAP1Q01518 475 aa29.45■■■□□ 2.31
ATXN3-253ENST00000621269 PANK1Q8TE04 598 aa29.45■■■□□ 2.31
ATXN3-253ENST00000621269 ZHX2Q9Y6X8 837 aa29.45■■■□□ 2.31
ATXN3-253ENST00000621269 MS4A1P11836 297 aa29.44■■■□□ 2.3
ATXN3-253ENST00000621269 CTNND1O60716 968 aaKnown RBP29.43■■■□□ 2.3
ATXN3-253ENST00000621269 PTPRAP18433 802 aa29.43■■■□□ 2.3
ATXN3-253ENST00000621269 NAA16Q6N069 864 aaPredicted RBP29.43■■■□□ 2.3
ATXN3-253ENST00000621269 CEP85Q6P2H3 762 aa29.43■■■□□ 2.3
ATXN3-253ENST00000621269 TNRC18O15417 2968 aaPredicted RBP29.42■■■□□ 2.3
ATXN3-253ENST00000621269 LACTBP83111 547 aaPredicted RBP29.42■■■□□ 2.3
ATXN3-253ENST00000621269 TEX11Q8IYF3 940 aa29.42■■■□□ 2.3
ATXN3-253ENST00000621269 ZNF512BQ96KM6 892 aaPredicted RBP29.42■■■□□ 2.3
ATXN3-253ENST00000621269 TBC1D12O60347 775 aa29.41■■■□□ 2.3
ATXN3-253ENST00000621269 BAG3O95817 575 aa29.41■■■□□ 2.3
ATXN3-253ENST00000621269 MOGSQ13724 837 aa29.41■■■□□ 2.3
ATXN3-253ENST00000621269 FASTKD5Q7L8L6 764 aaKnown RBP29.41■■■□□ 2.3
ATXN3-253ENST00000621269 CCDC8Q9H0W5 538 aaPredicted RBP29.41■■■□□ 2.3
ATXN3-253ENST00000621269 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.41■■■□□ 2.3
ATXN3-253ENST00000621269 CPA4Q9UI42 421 aa29.41■■■□□ 2.3
ATXN3-253ENST00000621269 CYP2E1P05181 493 aaPredicted RBP29.4■■■□□ 2.3
ATXN3-253ENST00000621269 SLURP2P0DP57 97 aa29.4■■■□□ 2.3
ATXN3-253ENST00000621269 C17orf99Q6UX52 265 aa29.4■■■□□ 2.3
ATXN3-253ENST00000621269 ARMC5Q96C12 935 aa29.4■■■□□ 2.3
ATXN3-253ENST00000621269 OSBPL5Q9H0X9 879 aaPredicted RBP29.4■■■□□ 2.3
ATXN3-253ENST00000621269 DBNLQ9UJU6 430 aaKnown RBP29.4■■■□□ 2.3
ATXN3-253ENST00000621269 GNRH1P01148 92 aa29.39■■■□□ 2.3
ATXN3-253ENST00000621269 PLCG2P16885 1265 aa29.39■■■□□ 2.3
ATXN3-253ENST00000621269 ERC1Q8IUD2 1116 aa29.39■■■□□ 2.3
ATXN3-253ENST00000621269 SH3RF3Q8TEJ3 882 aaPredicted RBP29.39■■■□□ 2.3
ATXN3-253ENST00000621269 ARHGAP39Q9C0H5 1083 aa29.39■■■□□ 2.3
ATXN3-253ENST00000621269 AATFQ9NY61 560 aaKnown RBP eCLIP29.39■■■□□ 2.3
ATXN3-253ENST00000621269 AFG3L2Q9Y4W6 797 aa29.39■■■□□ 2.3
ATXN3-253ENST00000621269 IGSF3O75054 1194 aa29.38■■■□□ 2.29
ATXN3-253ENST00000621269 ZAP70P43403 619 aa29.38■■■□□ 2.29
ATXN3-253ENST00000621269 SLC9C1Q4G0N8 1177 aa29.38■■■□□ 2.29
ATXN3-253ENST00000621269 NBPF11Q86T75 865 aa29.38■■■□□ 2.29
ATXN3-253ENST00000621269 EAF2Q96CJ1 260 aaPredicted RBP29.38■■■□□ 2.29
ATXN3-253ENST00000621269 PARK7Q99497 189 aaKnown RBP29.38■■■□□ 2.29
ATXN3-253ENST00000621269 TLR7Q9NYK1 1049 aaKnown RBP29.38■■■□□ 2.29
ATXN3-253ENST00000621269 PTCH2Q9Y6C5 1203 aa29.38■■■□□ 2.29
ATXN3-253ENST00000621269 COL2A1P02458 1487 aaPredicted RBP29.37■■■□□ 2.29
ATXN3-253ENST00000621269 A0A0G2JLL6 359 aaPredicted RBP29.37■■■□□ 2.29
ATXN3-253ENST00000621269 GPAT2Q6NUI2 795 aa29.37■■■□□ 2.29
ATXN3-253ENST00000621269 PRRT2Q7Z6L0 340 aaPredicted RBP29.37■■■□□ 2.29
ATXN3-253ENST00000621269 EXOC6BQ9Y2D4 811 aa29.37■■■□□ 2.29
ATXN3-253ENST00000621269 GADL1Q6ZQY3 521 aa29.36■■■□□ 2.29
ATXN3-253ENST00000621269 HTTP42858 3142 aa29.35■■■□□ 2.29
ATXN3-253ENST00000621269 TRIM75PA6NK02 468 aa29.35■■■□□ 2.29
ATXN3-253ENST00000621269 FAM196BA6NMK8 535 aa29.35■■■□□ 2.29
ATXN3-253ENST00000621269 ECM2O94769 699 aaPredicted RBP29.35■■■□□ 2.29
ATXN3-253ENST00000621269 HSP90AB4PQ58FF6 505 aa29.35■■■□□ 2.29
ATXN3-253ENST00000621269 POTEFA5A3E0 1075 aa29.34■■■□□ 2.29
ATXN3-253ENST00000621269 PRMT2P55345 433 aa29.34■■■□□ 2.29
ATXN3-253ENST00000621269 PPP4CP60510 307 aa29.34■■■□□ 2.29
ATXN3-253ENST00000621269 TMEM106CQ9BVX2 250 aa29.34■■■□□ 2.29
ATXN3-253ENST00000621269 DHX36Q9H2U1 1008 aaKnown RBP29.34■■■□□ 2.29
ATXN3-253ENST00000621269 PIH1D3Q9NQM4 214 aaKnown RBP29.34■■■□□ 2.29
ATXN3-253ENST00000621269 ADGRA2Q96PE1 1338 aa29.34■■■□□ 2.29
ATXN3-253ENST00000621269 CYP2C8P10632 490 aa29.33■■■□□ 2.29
ATXN3-253ENST00000621269 PSMC4P43686 418 aa29.33■■■□□ 2.29
ATXN3-253ENST00000621269 AACSQ86V21 672 aa29.33■■■□□ 2.29
ATXN3-253ENST00000621269 ZNF333Q96JL9 665 aa29.33■■■□□ 2.29
ATXN3-253ENST00000621269 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.33■■■□□ 2.29
ATXN3-253ENST00000621269 PI4KBQ9UBF8 816 aa29.33■■■□□ 2.29
ATXN3-253ENST00000621269 HERC5Q9UII4 1024 aaKnown RBP29.33■■■□□ 2.29
ATXN3-253ENST00000621269 MAST2Q6P0Q8 1798 aa29.33■■■□□ 2.29
ATXN3-253ENST00000621269 DOCK1Q14185 1865 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms