RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 FRAT1Q92837 279 aaPredicted RBP14.22□□□□□ -0.13
CPNE3-210ENST00000621245 CLUAP1Q96AJ1 413 aa14.22□□□□□ -0.13
CPNE3-210ENST00000621245 A0A1B0GUL7 405 aa14.21□□□□□ -0.13
CPNE3-210ENST00000621245 POTEFA5A3E0 1075 aa14.21□□□□□ -0.13
CPNE3-210ENST00000621245 BTBD19C9JJ37 291 aa14.21□□□□□ -0.13
CPNE3-210ENST00000621245 MTX1Q13505 466 aa14.21□□□□□ -0.13
CPNE3-210ENST00000621245 TAF1CQ15572 869 aaPredicted RBP14.21□□□□□ -0.13
CPNE3-210ENST00000621245 ARHGAP45Q92619 1136 aa14.21□□□□□ -0.13
CPNE3-210ENST00000621245 XAGE2Q96GT9 111 aa14.21□□□□□ -0.13
CPNE3-210ENST00000621245 ARHGAP39Q9C0H5 1083 aa14.21□□□□□ -0.13
CPNE3-210ENST00000621245 USP40Q9NVE5 1235 aa14.21□□□□□ -0.13
CPNE3-210ENST00000621245 GAKO14976 1311 aa14.2□□□□□ -0.14
CPNE3-210ENST00000621245 PITPNM1O00562 1244 aa14.2□□□□□ -0.14
CPNE3-210ENST00000621245 GTF2A2P52657 109 aa14.2□□□□□ -0.14
CPNE3-210ENST00000621245 SP3Q02447 781 aa14.2□□□□□ -0.14
CPNE3-210ENST00000621245 PPIL2Q13356 520 aa14.2□□□□□ -0.14
CPNE3-210ENST00000621245 MOGSQ13724 837 aa14.2□□□□□ -0.14
CPNE3-210ENST00000621245 ATF7IPQ6VMQ6 1270 aa14.2□□□□□ -0.14
CPNE3-210ENST00000621245 TMEM57Q8N5G2 664 aa14.2□□□□□ -0.14
CPNE3-210ENST00000621245 ZNF341Q9BYN7 854 aa14.2□□□□□ -0.14
CPNE3-210ENST00000621245 DDX4Q9NQI0 724 aaKnown RBP14.2□□□□□ -0.14
CPNE3-210ENST00000621245 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.2□□□□□ -0.14
CPNE3-210ENST00000621245 DENND2AQ9ULE3 1009 aa14.2□□□□□ -0.14
CPNE3-210ENST00000621245 PTPN22Q9Y2R2 807 aa14.2□□□□□ -0.14
CPNE3-210ENST00000621245 CTGFP29279 349 aa14.19□□□□□ -0.14
CPNE3-210ENST00000621245 RGS3P49796 1198 aa14.19□□□□□ -0.14
CPNE3-210ENST00000621245 ERO1BQ86YB8 467 aa14.19□□□□□ -0.14
CPNE3-210ENST00000621245 ERO1AQ96HE7 468 aa14.19□□□□□ -0.14
CPNE3-210ENST00000621245 C1orf115Q9H7X2 142 aa14.19□□□□□ -0.14
CPNE3-210ENST00000621245 GNL3LQ9NVN8 582 aaKnown RBP14.19□□□□□ -0.14
CPNE3-210ENST00000621245 ABCF2Q9UG63 623 aa14.19□□□□□ -0.14
CPNE3-210ENST00000621245 ZNF112Q9UJU3 913 aa14.19□□□□□ -0.14
CPNE3-210ENST00000621245 SEMA3EO15041 775 aa14.18□□□□□ -0.14
CPNE3-210ENST00000621245 WDHD1O75717 1129 aaPredicted RBP14.18□□□□□ -0.14
CPNE3-210ENST00000621245 GNAI3P08754 354 aa14.18□□□□□ -0.14
CPNE3-210ENST00000621245 OTUD7BQ6GQQ9 843 aa14.18□□□□□ -0.14
CPNE3-210ENST00000621245 TBC1D9Q6ZT07 1266 aa14.18□□□□□ -0.14
CPNE3-210ENST00000621245 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.18□□□□□ -0.14
CPNE3-210ENST00000621245 EFCC1Q9HA90 598 aa14.18□□□□□ -0.14
CPNE3-210ENST00000621245 HMG20BQ9P0W2 317 aa14.18□□□□□ -0.14
CPNE3-210ENST00000621245 LOC285556D6RIA3 1793 aa14.18□□□□□ -0.14
CPNE3-210ENST00000621245 ADGRA2Q96PE1 1338 aa14.17□□□□□ -0.14
CPNE3-210ENST00000621245 DDTLA6NHG4 134 aaPredicted RBP14.17□□□□□ -0.14
CPNE3-210ENST00000621245 GNAI2P04899 355 aa14.17□□□□□ -0.14
CPNE3-210ENST00000621245 RLBP1P12271 317 aa14.17□□□□□ -0.14
CPNE3-210ENST00000621245 BTDP43251 543 aa14.17□□□□□ -0.14
CPNE3-210ENST00000621245 MECOMQ03112 1051 aa14.17□□□□□ -0.14
CPNE3-210ENST00000621245 SNAPC2Q13487 334 aa14.17□□□□□ -0.14
CPNE3-210ENST00000621245 DCAF15Q66K64 600 aa14.17□□□□□ -0.14
CPNE3-210ENST00000621245 CCDC84Q86UT8 332 aaPredicted RBP14.17□□□□□ -0.14
CPNE3-210ENST00000621245 DZIP1Q86YF9 867 aaKnown RBP14.17□□□□□ -0.14
CPNE3-210ENST00000621245 PTCH2Q9Y6C5 1203 aa14.17□□□□□ -0.14
CPNE3-210ENST00000621245 SZT2Q5T011 3432 aa14.17□□□□□ -0.14
CPNE3-210ENST00000621245 DOCK3Q8IZD9 2030 aa14.17□□□□□ -0.14
CPNE3-210ENST00000621245 RANBP2P49792 3224 aaKnown RBP14.17□□□□□ -0.14
CPNE3-210ENST00000621245 MROH7-TTC4A0A0A0MT08 1334 aa14.16□□□□□ -0.14
CPNE3-210ENST00000621245 PDS5AQ29RF7 1337 aaKnown RBP14.16□□□□□ -0.14
CPNE3-210ENST00000621245 FAM196BA6NMK8 535 aa14.16□□□□□ -0.14
CPNE3-210ENST00000621245 PHF20L1A8MW92 1017 aa14.16□□□□□ -0.14
CPNE3-210ENST00000621245 CETPP11597 493 aa14.16□□□□□ -0.14
CPNE3-210ENST00000621245 RHBDL3P58872 404 aa14.16□□□□□ -0.14
CPNE3-210ENST00000621245 HNRNPUQ00839 825 aaKnown RBP eCLIP14.16□□□□□ -0.14
CPNE3-210ENST00000621245 PICALMQ13492 652 aa14.16□□□□□ -0.14
CPNE3-210ENST00000621245 NEUROD6Q96NK8 337 aa14.16□□□□□ -0.14
CPNE3-210ENST00000621245 ZFYVE28Q9HCC9 887 aa14.16□□□□□ -0.14
CPNE3-210ENST00000621245 MCAMP43121 646 aa14.15□□□□□ -0.14
CPNE3-210ENST00000621245 PPATQ06203 517 aa14.15□□□□□ -0.14
CPNE3-210ENST00000621245 NOL9Q5SY16 702 aaKnown RBP14.15□□□□□ -0.14
CPNE3-210ENST00000621245 ARMC5Q96C12 935 aa14.15□□□□□ -0.14
CPNE3-210ENST00000621245 IDI2Q9BXS1 227 aa14.15□□□□□ -0.14
CPNE3-210ENST00000621245 CPA4Q9UI42 421 aa14.15□□□□□ -0.14
CPNE3-210ENST00000621245 KCNH4Q9UQ05 1017 aa14.15□□□□□ -0.14
CPNE3-210ENST00000621245 CEP290O15078 2479 aa14.15□□□□□ -0.14
CPNE3-210ENST00000621245 MYH1P12882 1939 aa14.14□□□□□ -0.15
CPNE3-210ENST00000621245 TLR2O60603 784 aa14.14□□□□□ -0.15
CPNE3-210ENST00000621245 MYCP01106 439 aaPredicted RBP14.14□□□□□ -0.15
CPNE3-210ENST00000621245 ARID4AP29374 1257 aaPredicted RBP14.14□□□□□ -0.15
CPNE3-210ENST00000621245 MVPQ14764 893 aaKnown RBP14.14□□□□□ -0.15
CPNE3-210ENST00000621245 GPAT2Q6NUI2 795 aa14.14□□□□□ -0.15
CPNE3-210ENST00000621245 SPATA5Q8NB90 893 aa14.14□□□□□ -0.15
CPNE3-210ENST00000621245 NSUN4Q96CB9 384 aaKnown RBP14.14□□□□□ -0.15
CPNE3-210ENST00000621245 HOOK2Q96ED9 719 aa14.14□□□□□ -0.15
CPNE3-210ENST00000621245 ZNF333Q96JL9 665 aa14.14□□□□□ -0.15
CPNE3-210ENST00000621245 PDHXO00330 501 aa14.13□□□□□ -0.15
CPNE3-210ENST00000621245 IPO8O15397 1037 aaKnown RBP14.13□□□□□ -0.15
CPNE3-210ENST00000621245 ENTPD3O75355 529 aa14.13□□□□□ -0.15
CPNE3-210ENST00000621245 EN2P19622 333 aaPredicted RBP14.13□□□□□ -0.15
CPNE3-210ENST00000621245 LACTBP83111 547 aaPredicted RBP14.13□□□□□ -0.15
CPNE3-210ENST00000621245 RRP1BQ14684 758 aaKnown RBP14.13□□□□□ -0.15
CPNE3-210ENST00000621245 ZKSCAN2Q63HK3 967 aa14.13□□□□□ -0.15
CPNE3-210ENST00000621245 C17orf99Q6UX52 265 aa14.13□□□□□ -0.15
CPNE3-210ENST00000621245 ZGPATQ8N5A5 531 aaKnown RBP14.13□□□□□ -0.15
CPNE3-210ENST00000621245 SH3TC2Q8TF17 1288 aa14.13□□□□□ -0.15
CPNE3-210ENST00000621245 FAM163AQ96GL9 167 aaPredicted RBP14.13□□□□□ -0.15
CPNE3-210ENST00000621245 DBNDD2Q9BQY9 259 aa14.13□□□□□ -0.15
CPNE3-210ENST00000621245 SNRKQ9NRH2 765 aa14.13□□□□□ -0.15
CPNE3-210ENST00000621245 TLR7Q9NYK1 1049 aaKnown RBP14.13□□□□□ -0.15
CPNE3-210ENST00000621245 HDAC5Q9UQL6 1122 aa14.13□□□□□ -0.15
CPNE3-210ENST00000621245 AKAP2Q9Y2D5 859 aa14.13□□□□□ -0.15
CPNE3-210ENST00000621245 GPR75-ASB3A0A0A6YYF3 556 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms