RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 PIH1D3Q9NQM4 214 aaKnown RBP10.4□□□□□ -0.74
GGA3-222ENST00000621217 RPAP1Q9BWH6 1393 aaPredicted RBP10.4□□□□□ -0.74
GGA3-222ENST00000621217 CTAGE5O15320 804 aa10.4□□□□□ -0.74
GGA3-222ENST00000621217 STX17P56962 302 aa10.4□□□□□ -0.74
GGA3-222ENST00000621217 AXDND1Q5T1B0 1012 aaPredicted RBP10.4□□□□□ -0.74
GGA3-222ENST00000621217 SOGA3Q5TF21 947 aa10.4□□□□□ -0.74
GGA3-222ENST00000621217 KIF18AQ8NI77 898 aa10.4□□□□□ -0.74
GGA3-222ENST00000621217 CLIC4Q9Y696 253 aa10.4□□□□□ -0.74
GGA3-222ENST00000621217 MROH5Q6ZUA9 1318 aa10.4□□□□□ -0.75
GGA3-222ENST00000621217 SCNN1DP51172 638 aa10.4□□□□□ -0.75
GGA3-222ENST00000621217 BMS1Q14692 1282 aaKnown RBP10.4□□□□□ -0.75
GGA3-222ENST00000621217 ZMYM1Q5SVZ6 1142 aa10.4□□□□□ -0.75
GGA3-222ENST00000621217 CLEC17AQ6ZS10 378 aa10.4□□□□□ -0.75
GGA3-222ENST00000621217 ATG9AQ7Z3C6 839 aa10.4□□□□□ -0.75
GGA3-222ENST00000621217 ARHGEF1Q92888 912 aaKnown RBP10.4□□□□□ -0.75
GGA3-222ENST00000621217 ISCA1Q9BUE6 129 aa10.4□□□□□ -0.75
GGA3-222ENST00000621217 KAT14Q9H8E8 782 aa10.4□□□□□ -0.75
GGA3-222ENST00000621217 DLG5Q8TDM6 1919 aa10.39□□□□□ -0.75
GGA3-222ENST00000621217 ZNF804AQ7Z570 1209 aa10.39□□□□□ -0.75
GGA3-222ENST00000621217 TGFBRAP1Q8WUH2 860 aa10.39□□□□□ -0.75
GGA3-222ENST00000621217 STAMQ92783 540 aa10.39□□□□□ -0.75
GGA3-222ENST00000621217 FEZ1Q99689 392 aa10.39□□□□□ -0.75
GGA3-222ENST00000621217 ANGEL1Q9UNK9 670 aaKnown RBP10.39□□□□□ -0.75
GGA3-222ENST00000621217 MRVI1Q9Y6F6 885 aa10.39□□□□□ -0.75
GGA3-222ENST00000621217 SPATA31A1Q5TZJ5 1347 aa10.39□□□□□ -0.75
GGA3-222ENST00000621217 FAM160A1Q05DH4 1040 aa10.39□□□□□ -0.75
GGA3-222ENST00000621217 KCNG4Q8TDN1 519 aa10.39□□□□□ -0.75
GGA3-222ENST00000621217 CLIC6Q96NY7 704 aa10.39□□□□□ -0.75
GGA3-222ENST00000621217 DSCC1Q9BVC3 393 aa10.39□□□□□ -0.75
GGA3-222ENST00000621217 EPB41L2O43491 1005 aaKnown RBP10.39□□□□□ -0.75
GGA3-222ENST00000621217 LDHCP07864 332 aa10.39□□□□□ -0.75
GGA3-222ENST00000621217 DIXDC1Q155Q3 683 aa10.39□□□□□ -0.75
GGA3-222ENST00000621217 ZSWIM4Q9H7M6 989 aa10.39□□□□□ -0.75
GGA3-222ENST00000621217 CCDC196A0A1B0GTZ2 297 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 PFKFB2O60825 505 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 CTR9Q6PD62 1173 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 GJD4Q96KN9 370 aaPredicted RBP10.38□□□□□ -0.75
GGA3-222ENST00000621217 PLIN2Q99541 437 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 GGA1Q9UJY5 639 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 SERPINB2P05120 415 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 TOP1P11387 765 aaKnown RBP10.38□□□□□ -0.75
GGA3-222ENST00000621217 SPTY2D1Q68D10 685 aaPredicted RBP10.38□□□□□ -0.75
GGA3-222ENST00000621217 KRT40Q6A162 431 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 TEX11Q8IYF3 940 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 DHX58Q96C10 678 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 PGBD1Q96JS3 809 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 VEZTQ9HBM0 779 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 CABP5Q9NP86 173 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 DENND2AQ9ULE3 1009 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 NRXN3Q9Y4C0 1643 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 SMTNL1A8MU46 457 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 POLR3GO15318 223 aaPredicted RBP10.38□□□□□ -0.75
GGA3-222ENST00000621217 URI1O94763 535 aaPredicted RBP10.38□□□□□ -0.75
GGA3-222ENST00000621217 ANO1Q5XXA6 986 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 C11orf57Q6ZUT1 292 aaPredicted RBP10.38□□□□□ -0.75
GGA3-222ENST00000621217 IFNL3Q8IZI9 196 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 KRT23Q9C075 422 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 ANKRD2Q9GZV1 360 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 PCDHA7Q9UN72 937 aa10.38□□□□□ -0.75
GGA3-222ENST00000621217 NDUFA8P51970 172 aa10.37□□□□□ -0.75
GGA3-222ENST00000621217 UBASH3AP57075 661 aa10.37□□□□□ -0.75
GGA3-222ENST00000621217 MFSD14BQ5SR56 506 aa10.37□□□□□ -0.75
GGA3-222ENST00000621217 ZNF75DP51815 510 aa10.37□□□□□ -0.75
GGA3-222ENST00000621217 ARID5BQ14865 1188 aa10.37□□□□□ -0.75
GGA3-222ENST00000621217 KIAA0825Q8IV33 1275 aa10.37□□□□□ -0.75
GGA3-222ENST00000621217 LCORLQ8N3X6 602 aa10.37□□□□□ -0.75
GGA3-222ENST00000621217 LINC00116Q8NCU8 138 aa10.37□□□□□ -0.75
GGA3-222ENST00000621217 IPO4Q8TEX9 1081 aaKnown RBP10.37□□□□□ -0.75
GGA3-222ENST00000621217 ZNF202O95125 648 aa10.37□□□□□ -0.75
GGA3-222ENST00000621217 HEATR3Q7Z4Q2 680 aa10.37□□□□□ -0.75
GGA3-222ENST00000621217 WASF1Q92558 559 aa10.37□□□□□ -0.75
GGA3-222ENST00000621217 SLC4A9Q96Q91 983 aa10.37□□□□□ -0.75
GGA3-222ENST00000621217 TMOD2Q9NZR1 351 aa10.37□□□□□ -0.75
GGA3-222ENST00000621217 VGLL3A8MV65 326 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 RIOK3O14730 519 aaKnown RBP10.36□□□□□ -0.75
GGA3-222ENST00000621217 ECM2O94769 699 aaPredicted RBP10.36□□□□□ -0.75
GGA3-222ENST00000621217 ZNF827Q17R98 1081 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 CEP135Q66GS9 1140 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 DPP8Q6V1X1 898 aaPredicted RBP10.36□□□□□ -0.75
GGA3-222ENST00000621217 ANKRD20A12PQ8NF67 263 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 FAM107BQ9H098 131 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 WTIPA6NIX2 430 aaPredicted RBP10.36□□□□□ -0.75
GGA3-222ENST00000621217 ERVV-1B6SEH8 477 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 ZNF500O60304 480 aaPredicted RBP10.36□□□□□ -0.75
GGA3-222ENST00000621217 EIF5P55010 431 aaKnown RBP10.36□□□□□ -0.75
GGA3-222ENST00000621217 MYSM1Q5VVJ2 828 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 DIS3L2Q8IYB7 885 aaKnown RBP10.36□□□□□ -0.75
GGA3-222ENST00000621217 TXLNBQ8N3L3 684 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 TCEAL9Q9UHQ7 104 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 V9GY48 417 aaPredicted RBP10.36□□□□□ -0.75
GGA3-222ENST00000621217 ZNF609O15014 1411 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 PRDX5P30044 214 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 OGFRQ9NZT2 677 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 PAXBP1Q9Y5B6 917 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 ZNF804BA4D1E1 1349 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 COL15A1P39059 1388 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 RESTQ13127 1097 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 PNOCQ13519 176 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 PPFIBP1Q86W92 1011 aa10.36□□□□□ -0.75
GGA3-222ENST00000621217 TRMT44Q8IYL2 757 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms