RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 AKR1B15C9JRZ8 316 aaPredicted RBP8□□□□□ -1.13
COLCA1-205ENST00000620864 ATP8B1O43520 1251 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 ITIH3Q06033 890 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 SLFN5Q08AF3 891 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 ZNF569Q5MCW4 686 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 KRT3P12035 628 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 UTP14CQ5TAP6 766 aaKnown RBP8□□□□□ -1.13
COLCA1-205ENST00000620864 CYP26C1Q6V0L0 522 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 EFCAB13Q8IY85 973 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 NCOA7Q8NI08 942 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 SCINQ9Y6U3 715 aa8□□□□□ -1.13
COLCA1-205ENST00000620864 RIMBP2O15034 1052 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 RPL13P26373 211 aaKnown RBP7.99□□□□□ -1.13
COLCA1-205ENST00000620864 BRAPQ7Z569 592 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 TMEM57Q8N5G2 664 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 SDCCAG3Q96C92 435 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 CCDC124Q96CT7 223 aaKnown RBP7.99□□□□□ -1.13
COLCA1-205ENST00000620864 INTS4Q96HW7 963 aaKnown RBP7.99□□□□□ -1.13
COLCA1-205ENST00000620864 MAK16Q9BXY0 300 aaKnown RBP7.99□□□□□ -1.13
COLCA1-205ENST00000620864 RTL1A6NKG5 1358 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 IFIT3O14879 490 aaKnown RBP7.99□□□□□ -1.13
COLCA1-205ENST00000620864 BCAR3O75815 825 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 HSPA8P11142 646 aaKnown RBP7.99□□□□□ -1.13
COLCA1-205ENST00000620864 TYRO3Q06418 890 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.99□□□□□ -1.13
COLCA1-205ENST00000620864 MRFAP1L1Q96HT8 127 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 BAG1Q99933 345 aaPredicted RBP7.99□□□□□ -1.13
COLCA1-205ENST00000620864 KRT23Q9C075 422 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 KDM5BQ9UGL1 1544 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 IDEP14735 1019 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 METAP2P50579 478 aaKnown RBP eCLIP7.99□□□□□ -1.13
COLCA1-205ENST00000620864 CACNB1Q02641 598 aaPredicted RBP7.99□□□□□ -1.13
COLCA1-205ENST00000620864 ZSCAN26Q16670 478 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 FCHSD1Q86WN1 690 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 CDCA7LQ96GN5 454 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 RAB17Q9H0T7 212 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 NUCKS1Q9H1E3 243 aaKnown RBP7.99□□□□□ -1.13
COLCA1-205ENST00000620864 PFDN4Q9NQP4 134 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 HOMER3Q9NSC5 361 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 KLHL14Q9P2G3 628 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 CALML3P27482 149 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 HHATQ5VTY9 493 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 STAG1Q8WVM7 1258 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 GFM2Q969S9 779 aaKnown RBP7.99□□□□□ -1.13
COLCA1-205ENST00000620864 TEX13AQ9BXU3 409 aaPredicted RBP7.99□□□□□ -1.13
COLCA1-205ENST00000620864 PUF60Q9UHX1 559 aaKnown RBP7.99□□□□□ -1.13
COLCA1-205ENST00000620864 ANKRD20A4Q4UJ75 823 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 ANKRD20A8PQ5CZ79 823 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 ANKRD20A2Q5SQ80 823 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 ANKRD20A1Q5TYW2 823 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 PNMA8AQ86V59 439 aaPredicted RBP7.99□□□□□ -1.13
COLCA1-205ENST00000620864 NRBF2Q96F24 287 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 NEK1Q96PY6 1258 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 TUBB6Q9BUF5 446 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 NOS1P29475 1434 aa7.99□□□□□ -1.13
COLCA1-205ENST00000620864 OPHN1O60890 802 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 CCDC92Q53HC0 331 aaPredicted RBP7.98□□□□□ -1.13
COLCA1-205ENST00000620864 HELBQ8NG08 1087 aaPredicted RBP7.98□□□□□ -1.13
COLCA1-205ENST00000620864 KIF1CO43896 1103 aaKnown RBP7.98□□□□□ -1.13
COLCA1-205ENST00000620864 LMNB2Q03252 620 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 POTEB3A0JP26 581 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 BIN1O00499 593 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 PLCB3Q01970 1234 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 POTEBQ6S5H4 581 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 NOD1Q9Y239 953 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 TMCO4Q5TGY1 634 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 RASIP1Q5U651 963 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 IGFLR1Q9H665 355 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 CTTNBP2NLQ9P2B4 639 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 ATP10AO60312 1499 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 TLDC2A0PJX2 215 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 SMIM24O75264 130 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 SLC5A1P13866 664 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 PODNQ7Z5L7 613 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 GTF3C6Q969F1 213 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 ORC3Q9UBD5 711 aaPredicted RBP7.98□□□□□ -1.13
COLCA1-205ENST00000620864 GUCA1BQ9UMX6 200 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 CCDC122Q5T0U0 273 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 AOPEPQ8N6M6 819 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 XAB2Q9HCS7 855 aaKnown RBP7.98□□□□□ -1.13
COLCA1-205ENST00000620864 RHOXF2BP0C7M4 288 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 CALM1P0DP23 149 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 CALM2P0DP24 149 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 CALM3P0DP25 149 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 CCDC152Q4G0S7 254 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 PPP4R1Q8TF05 950 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 RHOXF2Q9BQY4 288 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 USP16Q9Y5T5 823 aa7.98□□□□□ -1.13
COLCA1-205ENST00000620864 TXNDC9O14530 226 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 EEF2P13639 858 aaKnown RBP7.97□□□□□ -1.13
COLCA1-205ENST00000620864 NFE2L2Q16236 605 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 CHADLQ6NUI6 762 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 CCDC117Q8IWD4 279 aaPredicted RBP7.97□□□□□ -1.13
COLCA1-205ENST00000620864 NOX5Q96PH1 765 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 ADGRF5Q8IZF2 1346 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 LDHCP07864 332 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 DYNC1I2Q13409 638 aaKnown RBP7.97□□□□□ -1.13
COLCA1-205ENST00000620864 SYT10Q6XYQ8 523 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 PPP1R21Q6ZMI0 780 aa7.97□□□□□ -1.13
COLCA1-205ENST00000620864 HS2ST1Q7LGA3 356 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms