RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 KRT83P78385 493 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 PROSER3Q2NL68 480 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 RILPL1Q5EBL4 403 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 KRT40Q6A162 431 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 MAP4K1Q92918 833 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 HAUS7Q99871 368 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 PRR36Q9H6K5 1346 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 PABPN1LA6NDY0 278 aaKnown RBP9.43□□□□□ -0.9
ALMS1-208ENST00000620466 SCRN1Q12765 414 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 UBE4AQ14139 1066 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 HOOK3Q86VS8 718 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 NOP2P46087 812 aaKnown RBP9.43□□□□□ -0.9
ALMS1-208ENST00000620466 GRM1Q13255 1194 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 PUM3Q15397 648 aaKnown RBP9.43□□□□□ -0.9
ALMS1-208ENST00000620466 IGSF22Q8N9C0 903 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 USP28Q96RU2 1077 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 XPO4Q9C0E2 1151 aaKnown RBP9.43□□□□□ -0.9
ALMS1-208ENST00000620466 LARGE1O95461 756 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 TCERG1LQ5VWI1 586 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 MICALCLQ6ZW33 695 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 NBPF5PQ86XG9 351 aaPredicted RBP9.43□□□□□ -0.9
ALMS1-208ENST00000620466 CNGA4Q8IV77 575 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 FAM107BQ9H098 131 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 IQGAP1P46940 1657 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 MED14O60244 1454 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 IQSEC2Q5JU85 1478 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 NLRP1Q9C000 1473 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 PLEKHG1Q9ULL1 1385 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 SYNRGQ9UMZ2 1314 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 CETN1Q12798 172 aa9.43□□□□□ -0.9
ALMS1-208ENST00000620466 ZNF274Q96GC6 653 aaPredicted RBP9.43□□□□□ -0.9
ALMS1-208ENST00000620466 ADALQ6DHV7 355 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 CARD6Q9BX69 1037 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 ALKQ9UM73 1620 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 CALML3P27482 149 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 GNAQP50148 359 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 IQUBQ8NA54 791 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 VTI1AQ96AJ9 217 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 TACC1O75410 805 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 MRPS9P82933 396 aaKnown RBP9.42□□□□□ -0.9
ALMS1-208ENST00000620466 HDAC9Q9UKV0 1011 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 ZNF532Q9HCE3 1301 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 KRT86O43790 486 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 PFKFB1P16118 471 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 ZNF354CQ86Y25 554 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 LRRC8AQ8IWT6 810 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 DIS3L2Q8IYB7 885 aaKnown RBP9.42□□□□□ -0.9
ALMS1-208ENST00000620466 BICDL2A1A5D9 508 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 F8W031 263 aaPredicted RBP9.42□□□□□ -0.9
ALMS1-208ENST00000620466 IVLP07476 585 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 POSTNQ15063 836 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 ZNF589Q86UQ0 364 aaPredicted RBP9.42□□□□□ -0.9
ALMS1-208ENST00000620466 RSPH14Q9UHP6 348 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 ERBB4Q15303 1308 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 PI4K2BQ8TCG2 481 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 KCNJ14Q9UNX9 436 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 CLEC11AQ9Y240 323 aa9.42□□□□□ -0.9
ALMS1-208ENST00000620466 HSPD1P10809 573 aaKnown RBP9.41□□□□□ -0.9
ALMS1-208ENST00000620466 PICALMQ13492 652 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 MTX1Q13505 466 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 MCM9Q9NXL9 1143 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 TAF5LO75529 589 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 DTHD1Q6ZMT9 781 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 HDXQ7Z353 690 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 TSNARE1Q96NA8 513 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 VPS16Q9H269 839 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 C6orf50Q9HD87 102 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 PRAMEF22A3QJZ6 481 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 PHKG2P15735 406 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 CAPN2P17655 700 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 POLA2Q14181 598 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 MYSM1Q5VVJ2 828 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 TTC16Q8NEE8 873 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 NRBP1Q9UHY1 535 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 CLIC4Q9Y696 253 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 PPRC1Q5VV67 1664 aaKnown RBP9.41□□□□□ -0.9
ALMS1-208ENST00000620466 PDE8AO60658 829 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 TBCAO75347 108 aaKnown RBP9.41□□□□□ -0.9
ALMS1-208ENST00000620466 PIK3AP1Q6ZUJ8 805 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 TAOK3Q9H2K8 898 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 KIAA1468Q9P260 1216 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 CDC25BP30305 580 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 TUBB4BP68371 445 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 KIF5AQ12840 1032 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 PRPF4BQ13523 1007 aaKnown RBP9.41□□□□□ -0.9
ALMS1-208ENST00000620466 MLKLQ8NB16 471 aa9.41□□□□□ -0.9
ALMS1-208ENST00000620466 RRP36Q96EU6 259 aaKnown RBP9.41□□□□□ -0.9
ALMS1-208ENST00000620466 CEP63Q96MT8 703 aa9.4□□□□□ -0.9
ALMS1-208ENST00000620466 PCDHA7Q9UN72 937 aa9.4□□□□□ -0.9
ALMS1-208ENST00000620466 GRIPAP1Q4V328 841 aa9.4□□□□□ -0.9
ALMS1-208ENST00000620466 SPATA5Q8NB90 893 aa9.4□□□□□ -0.9
ALMS1-208ENST00000620466 DDX17Q92841 729 aaKnown RBP9.4□□□□□ -0.9
ALMS1-208ENST00000620466 LUC7L2Q9Y383 392 aaKnown RBP9.4□□□□□ -0.9
ALMS1-208ENST00000620466 CYP26C1Q6V0L0 522 aa9.4□□□□□ -0.9
ALMS1-208ENST00000620466 TRMT44Q8IYL2 757 aaKnown RBP9.4□□□□□ -0.9
ALMS1-208ENST00000620466 TBC1D5Q92609 795 aa9.4□□□□□ -0.9
ALMS1-208ENST00000620466 SETDB2Q96T68 719 aa9.4□□□□□ -0.9
ALMS1-208ENST00000620466 NAPGQ99747 312 aaPredicted RBP9.4□□□□□ -0.9
ALMS1-208ENST00000620466 FERMT1Q9BQL6 677 aa9.4□□□□□ -0.9
ALMS1-208ENST00000620466 NDUFA8P51970 172 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms