RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 HSP90AB4PQ58FF6 505 aa11.82□□□□□ -0.52
VPS11-207ENST00000620429 C1orf141Q5JVX7 400 aa11.82□□□□□ -0.52
VPS11-207ENST00000620429 VIPAS39Q9H9C1 493 aa11.82□□□□□ -0.52
VPS11-207ENST00000620429 BABAM1Q9NWV8 329 aa11.82□□□□□ -0.52
VPS11-207ENST00000620429 CAPN7Q9Y6W3 813 aa11.82□□□□□ -0.52
VPS11-207ENST00000620429 PXDNLA1KZ92 1463 aa11.82□□□□□ -0.52
VPS11-207ENST00000620429 VWA3AA6NCI4 1184 aa11.82□□□□□ -0.52
VPS11-207ENST00000620429 KINO60870 393 aaKnown RBP11.82□□□□□ -0.52
VPS11-207ENST00000620429 SNUPNO95149 360 aaKnown RBP11.82□□□□□ -0.52
VPS11-207ENST00000620429 TUBBP07437 444 aa11.82□□□□□ -0.52
VPS11-207ENST00000620429 HMGB1P09429 215 aaKnown RBP11.82□□□□□ -0.52
VPS11-207ENST00000620429 RPS6KA3P51812 740 aa11.82□□□□□ -0.52
VPS11-207ENST00000620429 PDCD2Q16342 344 aaPredicted RBP11.82□□□□□ -0.52
VPS11-207ENST00000620429 ANKRD23Q86SG2 305 aa11.82□□□□□ -0.52
VPS11-207ENST00000620429 KLHL23Q8NBE8 558 aa11.82□□□□□ -0.52
VPS11-207ENST00000620429 MICAL1Q8TDZ2 1067 aa11.82□□□□□ -0.52
VPS11-207ENST00000620429 RBM8AQ9Y5S9 174 aaKnown RBP11.82□□□□□ -0.52
VPS11-207ENST00000620429 RNF40O75150 1001 aa11.81□□□□□ -0.52
VPS11-207ENST00000620429 NECTIN1Q15223 517 aa11.81□□□□□ -0.52
VPS11-207ENST00000620429 CHRNA2Q15822 529 aa11.81□□□□□ -0.52
VPS11-207ENST00000620429 PROSER3Q2NL68 480 aa11.81□□□□□ -0.52
VPS11-207ENST00000620429 CREB3L3Q68CJ9 461 aa11.81□□□□□ -0.52
VPS11-207ENST00000620429 CLASRPQ8N2M8 674 aaKnown RBP11.81□□□□□ -0.52
VPS11-207ENST00000620429 LEO1Q8WVC0 666 aaPredicted RBP11.81□□□□□ -0.52
VPS11-207ENST00000620429 TCEANC2Q96MN5 208 aa11.81□□□□□ -0.52
VPS11-207ENST00000620429 ABCB6Q9NP58 842 aa11.81□□□□□ -0.52
VPS11-207ENST00000620429 ANO10Q9NW15 660 aa11.81□□□□□ -0.52
VPS11-207ENST00000620429 EME2A4GXA9 379 aaPredicted RBP11.81□□□□□ -0.52
VPS11-207ENST00000620429 PI4KAP2A4QPH2 592 aa11.81□□□□□ -0.52
VPS11-207ENST00000620429 SLC8A3P57103 927 aa11.81□□□□□ -0.52
VPS11-207ENST00000620429 TMC6Q7Z403 805 aa11.81□□□□□ -0.52
VPS11-207ENST00000620429 PI4KAP1Q8N8J0 262 aa11.81□□□□□ -0.52
VPS11-207ENST00000620429 THSD7AQ9UPZ6 1657 aa11.81□□□□□ -0.52
VPS11-207ENST00000620429 SF3B2Q13435 895 aaKnown RBP11.8□□□□□ -0.52
VPS11-207ENST00000620429 RCSD1Q6JBY9 416 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 TLDC1Q6P9B6 456 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 SRGAP1Q7Z6B7 1085 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 KIFC2Q96AC6 838 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 ECHDC1Q9NTX5 307 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 NLRP2Q9NX02 1062 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 USP42Q9H9J4 1324 aaKnown RBP11.8□□□□□ -0.52
VPS11-207ENST00000620429 PECAM1P16284 738 aaPredicted RBP11.8□□□□□ -0.52
VPS11-207ENST00000620429 CLNS1AP54105 237 aaKnown RBP11.8□□□□□ -0.52
VPS11-207ENST00000620429 CHMP4BP1P59074 171 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 AMOTQ4VCS5 1084 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 LARP1Q6PKG0 1096 aaKnown RBP11.8□□□□□ -0.52
VPS11-207ENST00000620429 MAGEC3Q8TD91 643 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 CDHR2Q9BYE9 1310 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 MYO1FO00160 1098 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 PHACTR2O75167 634 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 SYF2O95926 243 aaKnown RBP11.8□□□□□ -0.52
VPS11-207ENST00000620429 IFIT2P09913 472 aaKnown RBP11.8□□□□□ -0.52
VPS11-207ENST00000620429 PRPHP41219 470 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 COL9A3Q14050 684 aaPredicted RBP11.8□□□□□ -0.52
VPS11-207ENST00000620429 CDCA2Q69YH5 1023 aaPredicted RBP11.8□□□□□ -0.52
VPS11-207ENST00000620429 SPATS2Q86XZ4 545 aaKnown RBP11.8□□□□□ -0.52
VPS11-207ENST00000620429 CEP57L1Q8IYX8 460 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 MAB21L3Q8N8X9 362 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 DRAXINQ8NBI3 349 aaPredicted RBP11.8□□□□□ -0.52
VPS11-207ENST00000620429 THOC1Q96FV9 657 aaKnown RBP11.8□□□□□ -0.52
VPS11-207ENST00000620429 GPATCH3Q96I76 525 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 PGBD1Q96JS3 809 aa11.8□□□□□ -0.52
VPS11-207ENST00000620429 NAT10Q9H0A0 1025 aaKnown RBP11.8□□□□□ -0.52
VPS11-207ENST00000620429 PHRF1Q9P1Y6 1649 aaKnown RBP11.79□□□□□ -0.52
VPS11-207ENST00000620429 GIGYF1O75420 1035 aaPredicted RBP11.79□□□□□ -0.52
VPS11-207ENST00000620429 PSMA5P28066 241 aa11.79□□□□□ -0.52
VPS11-207ENST00000620429 GCKP35557 465 aa11.79□□□□□ -0.52
VPS11-207ENST00000620429 STK3Q13188 491 aa11.79□□□□□ -0.52
VPS11-207ENST00000620429 SLC39A6Q13433 755 aa11.79□□□□□ -0.52
VPS11-207ENST00000620429 BLOC1S2Q6QNY1 142 aa11.79□□□□□ -0.52
VPS11-207ENST00000620429 WDR24Q96S15 920 aa11.79□□□□□ -0.52
VPS11-207ENST00000620429 PNKPQ96T60 521 aa11.79□□□□□ -0.52
VPS11-207ENST00000620429 XPO4Q9C0E2 1151 aaKnown RBP11.79□□□□□ -0.52
VPS11-207ENST00000620429 HOMER3Q9NSC5 361 aa11.79□□□□□ -0.52
VPS11-207ENST00000620429 N4BP2Q86UW6 1770 aaPredicted RBP11.79□□□□□ -0.52
VPS11-207ENST00000620429 SMTNP53814 917 aa11.79□□□□□ -0.52
VPS11-207ENST00000620429 C1QTNF12Q5T7M4 302 aa11.79□□□□□ -0.52
VPS11-207ENST00000620429 EVI5LQ96CN4 794 aa11.79□□□□□ -0.52
VPS11-207ENST00000620429 FAM227BQ96M60 508 aa11.79□□□□□ -0.52
VPS11-207ENST00000620429 PSMD1Q99460 953 aa11.79□□□□□ -0.52
VPS11-207ENST00000620429 KLC4Q9NSK0 619 aa11.79□□□□□ -0.52
VPS11-207ENST00000620429 NCAPD2Q15021 1401 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 RGPD5Q99666 1765 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 SHTN1A0MZ66 631 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 SLC27A2O14975 620 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 CUTAO60888 179 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 ECM2O94769 699 aaPredicted RBP11.78□□□□□ -0.52
VPS11-207ENST00000620429 IRAK1P51617 712 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 GNG11P61952 73 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 PLCB4Q15147 1175 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 TBC1D25Q3MII6 688 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 AOPEPQ8N6M6 819 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 DHX58Q96C10 678 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 SUGCTQ9HAC7 445 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 ATP6V0A4Q9HBG4 840 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 ADCY9O60503 1353 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 AP1G2O75843 785 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 NMIQ13287 307 aaPredicted RBP11.78□□□□□ -0.52
VPS11-207ENST00000620429 ANKRD1Q15327 319 aa11.78□□□□□ -0.52
VPS11-207ENST00000620429 KIF4BQ2VIQ3 1234 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms