RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 MAD1L1Q9Y6D9 718 aa8.05□□□□□ -1.12
CSMD2-210ENST00000619121 hCG_1984214I3L0E3 225 aa8.05□□□□□ -1.12
CSMD2-210ENST00000619121 PPP2R3AQ06190 1150 aa8.05□□□□□ -1.12
CSMD2-210ENST00000619121 FLIIQ13045 1269 aa8.05□□□□□ -1.12
CSMD2-210ENST00000619121 NEK11Q8NG66 645 aa8.05□□□□□ -1.12
CSMD2-210ENST00000619121 CCDC124Q96CT7 223 aaKnown RBP8.05□□□□□ -1.12
CSMD2-210ENST00000619121 IMPACTQ9P2X3 320 aa8.05□□□□□ -1.12
CSMD2-210ENST00000619121 CCDC89Q8N998 374 aa8.05□□□□□ -1.12
CSMD2-210ENST00000619121 OLFML3Q9NRN5 406 aa8.05□□□□□ -1.12
CSMD2-210ENST00000619121 HDAC1Q13547 482 aaPredicted RBP8.04□□□□□ -1.12
CSMD2-210ENST00000619121 RRAGBQ5VZM2 374 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 NLRX1Q86UT6 975 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 MAGEB6P1A0A0J9YX57 407 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 SYKP43405 635 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 EXOSC9Q06265 439 aaKnown RBP8.04□□□□□ -1.12
CSMD2-210ENST00000619121 SETDB1Q15047 1291 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 FDX1P10109 184 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 ATP6V1AP38606 617 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 ZKSCAN3Q9BRR0 538 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 TBC1D2Q9BYX2 928 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 STX8Q9UNK0 236 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 HOXD10P28358 340 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 CDC42EP1Q00587 391 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 PPP2R3CQ969Q6 453 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 NPATQ14207 1427 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 ATP7AQ04656 1500 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 HLTFQ14527 1009 aaKnown RBP eCLIP8.04□□□□□ -1.12
CSMD2-210ENST00000619121 RUFY4Q6ZNE9 571 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 ARFGAP3Q9NP61 516 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 CSADQ9Y600 493 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 MYO9BQ13459 2157 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 SV2BQ7L1I2 683 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 PHLDB2Q86SQ0 1253 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.04□□□□□ -1.12
CSMD2-210ENST00000619121 DNAJC8O75937 253 aaPredicted RBP8.04□□□□□ -1.12
CSMD2-210ENST00000619121 MYCBPQ99417 103 aaPredicted RBP8.04□□□□□ -1.12
CSMD2-210ENST00000619121 MBIPQ9NS73 344 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 KYAT1Q16773 422 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 GRK7Q8WTQ7 553 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 SIRT1Q96EB6 747 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 SLC12A6Q9UHW9 1150 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 FAN1Q9Y2M0 1017 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 IFNA8P32881 189 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 PHBP35232 272 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 ASPHQ12797 758 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 ALCAMQ13740 583 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 GRPEL1Q9HAV7 217 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 HECW2Q9P2P5 1572 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 PLEKHG3A1L390 1219 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 GNAT1P11488 350 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 CCDC129Q6ZRS4 1044 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 ZNF622Q969S3 477 aaKnown RBP eCLIP8.04□□□□□ -1.12
CSMD2-210ENST00000619121 VCX3AQ9NNX9 186 aa8.04□□□□□ -1.12
CSMD2-210ENST00000619121 ZNF608Q9ULD9 1512 aaPredicted RBP8.04□□□□□ -1.12
CSMD2-210ENST00000619121 CHD1O14646 1710 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 ZBED4O75132 1171 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 EIF2AQ9BY44 585 aaKnown RBP8.03□□□□□ -1.12
CSMD2-210ENST00000619121 ADCY10Q96PN6 1610 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 E7EVH7 732 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 PPP2R5DQ14738 602 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 PUM3Q15397 648 aaKnown RBP8.03□□□□□ -1.12
CSMD2-210ENST00000619121 C10orf76Q5T2E6 689 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 SDCCAG8Q86SQ7 713 aaPredicted RBP8.03□□□□□ -1.12
CSMD2-210ENST00000619121 TRIM11Q96F44 468 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 ADD3Q9UEY8 706 aaKnown RBP8.03□□□□□ -1.12
CSMD2-210ENST00000619121 DRP2Q13474 957 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 GSTA5Q7RTV2 222 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 PLEKHG2Q9H7P9 1386 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 ASXL2Q76L83 1435 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 MYH3P11055 1940 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 ERVV-2B6SEH9 535 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 SRGAP2BP0DMP2 458 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 ERCC5P28715 1186 aaPredicted RBP8.03□□□□□ -1.12
CSMD2-210ENST00000619121 IFT81Q8WYA0 676 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 ZHX1Q9UKY1 873 aaPredicted RBP8.03□□□□□ -1.12
CSMD2-210ENST00000619121 PLEKHG1Q9ULL1 1385 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 GOLGA8FQ08AF8 430 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 GOLGA8DPQ0D2H9 430 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 ZNF354CQ86Y25 554 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 CACNA2D3Q8IZS8 1091 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 SPC24Q8NBT2 197 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 ADPGKQ9BRR6 497 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 HOMER3Q9NSC5 361 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 ATP6V0A2Q9Y487 856 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 CARMIL3Q8ND23 1372 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 VSIG10Q8N0Z9 540 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 SRPRBQ9Y5M8 271 aaKnown RBP8.03□□□□□ -1.12
CSMD2-210ENST00000619121 BUB1BO60566 1050 aaPredicted RBP8.03□□□□□ -1.12
CSMD2-210ENST00000619121 DEXIO95424 95 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 POSTNQ15063 836 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 TRIM47Q96LD4 638 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 UQCRHLA0A096LP55 91 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 AGTPBP1Q9UPW5 1226 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 FAM177A1Q8N128 213 aaPredicted RBP8.03□□□□□ -1.12
CSMD2-210ENST00000619121 KIFC2Q96AC6 838 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 PPP1R2P1Q96PQ5 205 aa8.03□□□□□ -1.12
CSMD2-210ENST00000619121 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.02□□□□□ -1.12
CSMD2-210ENST00000619121 NACA2Q9H009 215 aa8.02□□□□□ -1.12
CSMD2-210ENST00000619121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.02□□□□□ -1.12
CSMD2-210ENST00000619121 PDE8AO60658 829 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms