RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 LGR5O75473 907 aa13.86□□□□□ -0.19
MATR3-227ENST00000618441 AMPHP49418 695 aa13.86□□□□□ -0.19
MATR3-227ENST00000618441 FAM167BQ9BTA0 163 aa13.86□□□□□ -0.19
MATR3-227ENST00000618441 MADDQ8WXG6 1647 aa13.86□□□□□ -0.19
MATR3-227ENST00000618441 FOXO3O43524 673 aa13.86□□□□□ -0.19
MATR3-227ENST00000618441 SRGAP2O75044 1071 aa13.86□□□□□ -0.19
MATR3-227ENST00000618441 DNA2P51530 1060 aa13.86□□□□□ -0.19
MATR3-227ENST00000618441 IQSEC2Q5JU85 1478 aa13.86□□□□□ -0.19
MATR3-227ENST00000618441 ARHGAP25P42331 645 aa13.85□□□□□ -0.19
MATR3-227ENST00000618441 HAUS2Q9NVX0 235 aa13.85□□□□□ -0.19
MATR3-227ENST00000618441 DDX20Q9UHI6 824 aaKnown RBP13.85□□□□□ -0.19
MATR3-227ENST00000618441 PCDHA7Q9UN72 937 aa13.85□□□□□ -0.19
MATR3-227ENST00000618441 KIF1BO60333 1816 aa13.85□□□□□ -0.19
MATR3-227ENST00000618441 SYF2O95926 243 aaKnown RBP13.85□□□□□ -0.19
MATR3-227ENST00000618441 SEC24CP53992 1094 aa13.85□□□□□ -0.19
MATR3-227ENST00000618441 PPFIA1Q13136 1202 aa13.85□□□□□ -0.19
MATR3-227ENST00000618441 ZRSR2Q15696 482 aaKnown RBP13.85□□□□□ -0.19
MATR3-227ENST00000618441 ZCRB1Q8TBF4 217 aaKnown RBP13.85□□□□□ -0.19
MATR3-227ENST00000618441 ZNF483Q8TF39 744 aaPredicted RBP13.85□□□□□ -0.19
MATR3-227ENST00000618441 EIF2AK4Q9P2K8 1649 aaKnown RBP13.85□□□□□ -0.19
MATR3-227ENST00000618441 E7EVH7 732 aa13.85□□□□□ -0.19
MATR3-227ENST00000618441 MYL5Q02045 173 aa13.85□□□□□ -0.19
MATR3-227ENST00000618441 CHST3Q7LGC8 479 aa13.85□□□□□ -0.19
MATR3-227ENST00000618441 SMARCC2Q8TAQ2 1214 aa13.85□□□□□ -0.19
MATR3-227ENST00000618441 KCNB2Q92953 911 aa13.85□□□□□ -0.19
MATR3-227ENST00000618441 ZSWIM6Q9HCJ5 1215 aa13.85□□□□□ -0.19
MATR3-227ENST00000618441 SLC40A1Q9NP59 571 aa13.85□□□□□ -0.19
MATR3-227ENST00000618441 TAF6LQ9Y6J9 622 aa13.85□□□□□ -0.19
MATR3-227ENST00000618441 CDHR2Q9BYE9 1310 aa13.84□□□□□ -0.19
MATR3-227ENST00000618441 MEFVO15553 781 aaPredicted RBP13.84□□□□□ -0.19
MATR3-227ENST00000618441 ANKRD1Q15327 319 aa13.84□□□□□ -0.19
MATR3-227ENST00000618441 PREPLQ4J6C6 727 aaPredicted RBP13.84□□□□□ -0.19
MATR3-227ENST00000618441 WDR78Q5VTH9 848 aa13.84□□□□□ -0.19
MATR3-227ENST00000618441 NAPGQ99747 312 aaPredicted RBP13.84□□□□□ -0.19
MATR3-227ENST00000618441 PIP4K2BP78356 416 aa13.84□□□□□ -0.19
MATR3-227ENST00000618441 IRF5Q13568 498 aa13.84□□□□□ -0.19
MATR3-227ENST00000618441 FAM135BQ49AJ0 1406 aa13.84□□□□□ -0.19
MATR3-227ENST00000618441 CCDC70Q6NSX1 233 aa13.84□□□□□ -0.19
MATR3-227ENST00000618441 DDX17Q92841 729 aaKnown RBP13.84□□□□□ -0.19
MATR3-227ENST00000618441 ACEP12821 1306 aa13.84□□□□□ -0.19
MATR3-227ENST00000618441 STX17P56962 302 aa13.84□□□□□ -0.19
MATR3-227ENST00000618441 RESTQ13127 1097 aa13.84□□□□□ -0.19
MATR3-227ENST00000618441 ZNF827Q17R98 1081 aa13.84□□□□□ -0.19
MATR3-227ENST00000618441 Q6ZUG5 572 aa13.84□□□□□ -0.19
MATR3-227ENST00000618441 RHPN1Q8TCX5 695 aa13.84□□□□□ -0.19
MATR3-227ENST00000618441 PSMB7Q99436 277 aa13.84□□□□□ -0.19
MATR3-227ENST00000618441 HDAC6Q9UBN7 1215 aa13.84□□□□□ -0.19
MATR3-227ENST00000618441 KLHL33A6NCF5 533 aa13.83□□□□□ -0.19
MATR3-227ENST00000618441 MECOMQ03112 1051 aa13.83□□□□□ -0.19
MATR3-227ENST00000618441 USP4Q13107 963 aa13.83□□□□□ -0.19
MATR3-227ENST00000618441 MYSM1Q5VVJ2 828 aa13.83□□□□□ -0.19
MATR3-227ENST00000618441 MSL1Q68DK7 614 aa13.83□□□□□ -0.19
MATR3-227ENST00000618441 PPP1R42Q7Z4L9 355 aa13.83□□□□□ -0.19
MATR3-227ENST00000618441 ABTB2Q8N961 1025 aa13.83□□□□□ -0.19
MATR3-227ENST00000618441 BOLA2Q9H3K6 86 aa13.83□□□□□ -0.19
MATR3-227ENST00000618441 FRMD4BQ9Y2L6 1034 aa13.83□□□□□ -0.19
MATR3-227ENST00000618441 MROH2AA6NES4 1674 aa13.83□□□□□ -0.19
MATR3-227ENST00000618441 AATKQ6ZMQ8 1374 aa13.83□□□□□ -0.2
MATR3-227ENST00000618441 CLTAP09496 248 aa13.83□□□□□ -0.2
MATR3-227ENST00000618441 RWDD2BP57060 319 aa13.83□□□□□ -0.2
MATR3-227ENST00000618441 GUCY1A3Q02108 690 aa13.83□□□□□ -0.2
MATR3-227ENST00000618441 PNOCQ13519 176 aa13.83□□□□□ -0.2
MATR3-227ENST00000618441 USHBP1Q8N6Y0 703 aa13.83□□□□□ -0.2
MATR3-227ENST00000618441 TCP11Q8WWU5 503 aa13.83□□□□□ -0.2
MATR3-227ENST00000618441 TSPYL4Q9UJ04 414 aa13.83□□□□□ -0.2
MATR3-227ENST00000618441 EIF3HO15372 352 aaKnown RBP eCLIP13.83□□□□□ -0.2
MATR3-227ENST00000618441 CCT4P50991 539 aaKnown RBP13.83□□□□□ -0.2
MATR3-227ENST00000618441 NLRP12P59046 1061 aa13.83□□□□□ -0.2
MATR3-227ENST00000618441 ZFYVE27Q5T4F4 411 aa13.83□□□□□ -0.2
MATR3-227ENST00000618441 PARP9Q8IXQ6 854 aa13.83□□□□□ -0.2
MATR3-227ENST00000618441 HPCAL4Q9UM19 191 aa13.83□□□□□ -0.2
MATR3-227ENST00000618441 HSP90AB2PQ58FF8 381 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 ODF2Q5BJF6 829 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 SULT6B1Q6IMI4 303 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 CAPRIN2Q6IMN6 1127 aaKnown RBP13.82□□□□□ -0.2
MATR3-227ENST00000618441 VSTM4Q8IW00 320 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 STAG1Q8WVM7 1258 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 KIFC2Q96AC6 838 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 SLF1Q9BQI6 1058 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 SNUPNO95149 360 aaKnown RBP13.82□□□□□ -0.2
MATR3-227ENST00000618441 RHBDL3P58872 404 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 TEFQ10587 303 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 TMEM165Q9HC07 324 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 PYGLP06737 847 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 ADCY2Q08462 1091 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 PPP1R7Q15435 360 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 DNAJC14Q6Y2X3 702 aaPredicted RBP13.82□□□□□ -0.2
MATR3-227ENST00000618441 ANKLE2Q86XL3 938 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 CCDC13Q8IYE1 715 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 CLASRPQ8N2M8 674 aaKnown RBP13.82□□□□□ -0.2
MATR3-227ENST00000618441 CCDC26Q8TAB7 109 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 HNRNPLLQ8WVV9 542 aaKnown RBP13.82□□□□□ -0.2
MATR3-227ENST00000618441 JADE2Q9NQC1 790 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 MAP3K4Q9Y6R4 1608 aa13.82□□□□□ -0.2
MATR3-227ENST00000618441 OPLAHO14841 1288 aa13.81□□□□□ -0.2
MATR3-227ENST00000618441 SLC27A2O14975 620 aa13.81□□□□□ -0.2
MATR3-227ENST00000618441 TRIM68Q6AZZ1 485 aa13.81□□□□□ -0.2
MATR3-227ENST00000618441 GPIHBP1Q8IV16 184 aa13.81□□□□□ -0.2
MATR3-227ENST00000618441 CCDC8Q9H0W5 538 aaPredicted RBP13.81□□□□□ -0.2
MATR3-227ENST00000618441 C21orf2O43822 256 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms