RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 ZEB2O60315 1214 aa12.48□□□□□ -0.41
CCDC144B-208ENST00000618081 SLC39A6Q13433 755 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 PPP1R21Q6ZMI0 780 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 CD2APQ9Y5K6 639 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 CFAP74Q9C0B2 1584 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 P4HA1P13674 534 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 ZFP91Q96JP5 570 aaPredicted RBP12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 DNAJC25Q9H1X3 360 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 CFAP43Q8NDM7 1665 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 MYO5CQ9NQX4 1742 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 RIMS2Q9UQ26 1411 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 PUM3Q15397 648 aaKnown RBP12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 CCDC184Q52MB2 194 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 ANKRD44Q8N8A2 993 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 SBNO2Q9Y2G9 1366 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 CAPN2P17655 700 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 DCAF5Q96JK2 942 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 AZI2Q9H6S1 392 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 HELLSQ9NRZ9 838 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 RIOK3O14730 519 aaKnown RBP12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 ZNF569Q5MCW4 686 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 LINS1Q8NG48 757 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 CTNND2Q9UQB3 1225 aa12.47□□□□□ -0.41
CCDC144B-208ENST00000618081 AKR1B15C9JRZ8 316 aaPredicted RBP12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 CREB3L3Q68CJ9 461 aa12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 SPC25Q9HBM1 224 aa12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 SYCP2Q9BX26 1530 aa12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 ARHGEF35A5YM69 484 aa12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 LETM2Q2VYF4 491 aa12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 FAM76AQ8TAV0 307 aa12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 RIOK1Q9BRS2 568 aaKnown RBP12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 NOC4LQ9BVI4 516 aaKnown RBP12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 LZTFL1Q9NQ48 299 aa12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 SLC5A4Q9NY91 659 aa12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 SPOUT1Q5T280 376 aaKnown RBP12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 HDXQ7Z353 690 aa12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 LZTS2Q9BRK4 669 aa12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 GPCPD1Q9NPB8 672 aa12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 SAP30BPQ9UHR5 308 aaKnown RBP12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 KCNG1Q9UIX4 513 aa12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 CCDC122Q5T0U0 273 aa12.46□□□□□ -0.41
CCDC144B-208ENST00000618081 YTHDC2Q9H6S0 1430 aaKnown RBP12.46□□□□□ -0.42
CCDC144B-208ENST00000618081 PTPDC1A2A3K4 754 aa12.46□□□□□ -0.42
CCDC144B-208ENST00000618081 CHST3Q7LGC8 479 aa12.46□□□□□ -0.42
CCDC144B-208ENST00000618081 CDCA7Q9BWT1 371 aaPredicted RBP12.46□□□□□ -0.42
CCDC144B-208ENST00000618081 BCRP11274 1271 aa12.46□□□□□ -0.42
CCDC144B-208ENST00000618081 TNFAIP3P21580 790 aa12.46□□□□□ -0.42
CCDC144B-208ENST00000618081 WDR66Q8TBY9 1149 aa12.46□□□□□ -0.42
CCDC144B-208ENST00000618081 VCX3BQ9H321 246 aa12.46□□□□□ -0.42
CCDC144B-208ENST00000618081 DISP3Q9P2K9 1392 aa12.46□□□□□ -0.42
CCDC144B-208ENST00000618081 APOBRQ0VD83 1088 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 MUM1L1Q5H9M0 696 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 TRERF1Q96PN7 1200 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 KIF11P52732 1056 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 ATP2A3Q93084 1043 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 NUF2Q9BZD4 464 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 PKD2L1Q9P0L9 805 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 LMTK3Q96Q04 1460 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 NOLC1Q14978 699 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 LRRC59Q96AG4 307 aaKnown RBP12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 BICC1Q9H694 974 aaKnown RBP12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 RAD50Q92878 1312 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 KIF3CO14782 793 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 CHMP2AO43633 222 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 UFL1O94874 794 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 GGA1Q9UJY5 639 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 NPATQ14207 1427 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 A2MP01023 1474 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 DEXIO95424 95 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 ASIC2Q16515 512 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 SDCCAG8Q86SQ7 713 aaPredicted RBP12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 SUPT20HQ8NEM7 779 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 RAB3IPQ96QF0 476 aaPredicted RBP12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 VCXQ9H320 206 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 STK32BQ9NY57 414 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 H0YIN7 160 aa12.45□□□□□ -0.42
CCDC144B-208ENST00000618081 TLDC2A0PJX2 215 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 TTC36A6NLP5 189 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 CEP85LQ5SZL2 805 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 B4GALNT4Q76KP1 1039 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 NBPF11Q86T75 865 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 TCIRG1Q13488 830 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 NUP58Q9BVL2 599 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 VPS18Q9P253 973 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 PDE6BP35913 854 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 TFCP2Q12800 502 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 PARP10Q53GL7 1025 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 LGSNQ5TDP6 509 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 CCDC62Q6P9F0 684 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 ZNF365Q70YC5 407 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 TCEANC2Q96MN5 208 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 BAG1Q99933 345 aaPredicted RBP12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 PLCB4Q15147 1175 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 CYP26C1Q6V0L0 522 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 FAM114A2Q9NRY5 505 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 IBTKQ9P2D0 1353 aaPredicted RBP12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 STX17P56962 302 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 RSPH3Q86UC2 560 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 CEP57Q86XR8 500 aa12.44□□□□□ -0.42
CCDC144B-208ENST00000618081 CCDC89Q8N998 374 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms