RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 DHX29Q7Z478 1369 aaKnown RBP7.15□□□□□ -1.26
CUL3-216ENST00000617432 FGD6Q6ZV73 1430 aa7.15□□□□□ -1.27
CUL3-216ENST00000617432 MISP3Q96FF7 219 aa7.15□□□□□ -1.27
CUL3-216ENST00000617432 MIA2Q96PC5 1412 aa7.15□□□□□ -1.27
CUL3-216ENST00000617432 RC3H2Q9HBD1 1191 aaKnown RBP7.15□□□□□ -1.27
CUL3-216ENST00000617432 SOX13Q9UN79 622 aa7.15□□□□□ -1.27
CUL3-216ENST00000617432 ZMYM3Q14202 1370 aa7.14□□□□□ -1.27
CUL3-216ENST00000617432 PTPRKQ15262 1439 aa7.14□□□□□ -1.27
CUL3-216ENST00000617432 UHRF1BP1Q6BDS2 1440 aa7.14□□□□□ -1.27
CUL3-216ENST00000617432 LOC100289279A0A1B0GTE1 492 aa7.14□□□□□ -1.27
CUL3-216ENST00000617432 KIF3BO15066 747 aa7.14□□□□□ -1.27
CUL3-216ENST00000617432 HGSNATQ68CP4 663 aa7.14□□□□□ -1.27
CUL3-216ENST00000617432 ZNF765Q7L2R6 523 aa7.14□□□□□ -1.27
CUL3-216ENST00000617432 SIAH1Q8IUQ4 282 aa7.14□□□□□ -1.27
CUL3-216ENST00000617432 ZSCAN18Q8TBC5 510 aaPredicted RBP7.14□□□□□ -1.27
CUL3-216ENST00000617432 USP26Q9BXU7 913 aa7.14□□□□□ -1.27
CUL3-216ENST00000617432 DNMT1P26358 1616 aaKnown RBP7.14□□□□□ -1.27
CUL3-216ENST00000617432 TCOF1Q13428 1488 aaKnown RBP7.14□□□□□ -1.27
CUL3-216ENST00000617432 DAPK1P53355 1430 aa7.13□□□□□ -1.27
CUL3-216ENST00000617432 CNTLNQ9NXG0 1405 aa7.13□□□□□ -1.27
CUL3-216ENST00000617432 NFKBIEO00221 500 aa7.13□□□□□ -1.27
CUL3-216ENST00000617432 FUT4P22083 530 aa7.13□□□□□ -1.27
CUL3-216ENST00000617432 CFPP27918 469 aa7.13□□□□□ -1.27
CUL3-216ENST00000617432 SOX4Q06945 474 aaPredicted RBP7.13□□□□□ -1.27
CUL3-216ENST00000617432 MAP7Q14244 749 aa7.13□□□□□ -1.27
CUL3-216ENST00000617432 ARXQ96QS3 562 aa7.13□□□□□ -1.27
CUL3-216ENST00000617432 KDM5DQ9BY66 1539 aa7.13□□□□□ -1.27
CUL3-216ENST00000617432 RNF17Q9BXT8 1623 aaKnown RBP7.13□□□□□ -1.27
CUL3-216ENST00000617432 CEP152O94986 1710 aa7.12□□□□□ -1.27
CUL3-216ENST00000617432 PDE2AO00408 941 aaPredicted RBP7.12□□□□□ -1.27
CUL3-216ENST00000617432 SOX1O00570 391 aaPredicted RBP7.12□□□□□ -1.27
CUL3-216ENST00000617432 RAP1GAPP47736 663 aa7.12□□□□□ -1.27
CUL3-216ENST00000617432 SALL4Q9UJQ4 1053 aa7.12□□□□□ -1.27
CUL3-216ENST00000617432 ABCC3O15438 1527 aa7.11□□□□□ -1.27
CUL3-216ENST00000617432 DLGAP3O95886 979 aa7.11□□□□□ -1.27
CUL3-216ENST00000617432 MBNL3Q9NUK0 354 aaKnown RBP7.11□□□□□ -1.27
CUL3-216ENST00000617432 RAPGEFL1Q9UHV5 662 aa7.11□□□□□ -1.27
CUL3-216ENST00000617432 CEP170BQ9Y4F5 1589 aaPredicted RBP7.11□□□□□ -1.27
CUL3-216ENST00000617432 CAMSAP1Q5T5Y3 1602 aa7.11□□□□□ -1.27
CUL3-216ENST00000617432 ZNF142P52746 1687 aaPredicted RBP7.11□□□□□ -1.27
CUL3-216ENST00000617432 SHANK2Q9UPX8 1470 aa7.11□□□□□ -1.27
CUL3-216ENST00000617432 EIF2AK4Q9P2K8 1649 aaKnown RBP7.1□□□□□ -1.27
CUL3-216ENST00000617432 RNASE1P07998 156 aaKnown RBP7.1□□□□□ -1.27
CUL3-216ENST00000617432 TSPY4P0CV99 314 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 TSPY10P0CW01 314 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 BUD31P41223 144 aaPredicted RBP7.1□□□□□ -1.27
CUL3-216ENST00000617432 FKBP5Q13451 457 aaPredicted RBP7.1□□□□□ -1.27
CUL3-216ENST00000617432 IKBKEQ14164 716 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 C16orf46Q6P387 395 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 LCNL1Q6ZST4 164 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 C1QL4Q86Z23 238 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 SOX17Q9H6I2 414 aaPredicted RBP7.1□□□□□ -1.27
CUL3-216ENST00000617432 RRP7BPQ9NSQ0 103 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 DZANK1Q9NVP4 752 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 FAM53CQ9NYF3 392 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 KIF15Q9NS87 1388 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 NPATQ14207 1427 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 NCOA1Q15788 1441 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 LRRC10BA6NIK2 292 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 NFICP08651 508 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 BNIP3Q12983 259 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 FAM26DQ5JW98 314 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 PDE12Q6L8Q7 609 aaKnown RBP7.1□□□□□ -1.27
CUL3-216ENST00000617432 SAP130Q9H0E3 1048 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 VRTNQ9H8Y1 702 aa7.1□□□□□ -1.27
CUL3-216ENST00000617432 PZPP20742 1482 aa7.09□□□□□ -1.27
CUL3-216ENST00000617432 DUOX2Q9NRD8 1548 aa7.09□□□□□ -1.27
CUL3-216ENST00000617432 EIF4EBP3O60516 100 aaPredicted RBP7.09□□□□□ -1.28
CUL3-216ENST00000617432 ZAP70P43403 619 aa7.09□□□□□ -1.28
CUL3-216ENST00000617432 FAM50AQ14320 339 aaKnown RBP7.09□□□□□ -1.28
CUL3-216ENST00000617432 TTLL10Q6ZVT0 673 aa7.09□□□□□ -1.28
CUL3-216ENST00000617432 LRRC56Q8IYG6 542 aaPredicted RBP7.09□□□□□ -1.28
CUL3-216ENST00000617432 ELP3Q9H9T3 547 aa7.09□□□□□ -1.28
CUL3-216ENST00000617432 KANSL3Q9P2N6 904 aa7.09□□□□□ -1.28
CUL3-216ENST00000617432 PRDM15P57071 1507 aaPredicted RBP7.08□□□□□ -1.28
CUL3-216ENST00000617432 CD8BP10966 210 aa7.08□□□□□ -1.28
CUL3-216ENST00000617432 FLIIQ13045 1269 aa7.08□□□□□ -1.28
CUL3-216ENST00000617432 OGFOD3Q6PK18 319 aa7.08□□□□□ -1.28
CUL3-216ENST00000617432 TMEM102Q8N9M5 508 aaPredicted RBP7.08□□□□□ -1.28
CUL3-216ENST00000617432 LRRN4CLQ8ND94 238 aa7.08□□□□□ -1.28
CUL3-216ENST00000617432 PI4K2BQ8TCG2 481 aa7.08□□□□□ -1.28
CUL3-216ENST00000617432 GPR152Q8TDT2 470 aa7.08□□□□□ -1.28
CUL3-216ENST00000617432 BSNDQ8WZ55 320 aa7.08□□□□□ -1.28
CUL3-216ENST00000617432 PPP1R16BQ96T49 567 aa7.08□□□□□ -1.28
CUL3-216ENST00000617432 WASHC2CQ9Y4E1 1318 aa7.08□□□□□ -1.28
CUL3-216ENST00000617432 DEPDC5O75140 1603 aa7.08□□□□□ -1.28
CUL3-216ENST00000617432 ZC3H13Q5T200 1668 aaKnown RBP7.07□□□□□ -1.28
CUL3-216ENST00000617432 NEURL4Q96JN8 1562 aa7.07□□□□□ -1.28
CUL3-216ENST00000617432 ADGRL2O95490 1459 aa7.07□□□□□ -1.28
CUL3-216ENST00000617432 ERVK-7P63135 1459 aa7.07□□□□□ -1.28
CUL3-216ENST00000617432 TNRQ92752 1358 aa7.07□□□□□ -1.28
CUL3-216ENST00000617432 TNFRSF10BO14763 440 aa7.07□□□□□ -1.28
CUL3-216ENST00000617432 TSPAN15O95858 294 aa7.07□□□□□ -1.28
CUL3-216ENST00000617432 ADH5P11766 374 aa7.07□□□□□ -1.28
CUL3-216ENST00000617432 ACPPP15309 386 aa7.07□□□□□ -1.28
CUL3-216ENST00000617432 VN1R5Q7Z5H4 357 aa7.07□□□□□ -1.28
CUL3-216ENST00000617432 SEMA6CQ9H3T2 930 aa7.07□□□□□ -1.28
CUL3-216ENST00000617432 ADAMTS6Q9UKP5 1117 aa7.07□□□□□ -1.28
CUL3-216ENST00000617432 SPATA31D1Q6ZQQ2 1576 aa7.06□□□□□ -1.28
CUL3-216ENST00000617432 A2ML1A8K2U0 1454 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms