RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 SRGAP2O75044 1071 aa15.2■□□□□ 0.02
PPP4R3B-205ENST00000616288 HAUS2Q9NVX0 235 aa15.2■□□□□ 0.02
PPP4R3B-205ENST00000616288 RCOR1Q9UKL0 485 aa15.2■□□□□ 0.02
PPP4R3B-205ENST00000616288 WWC3Q9ULE0 1092 aa15.2■□□□□ 0.02
PPP4R3B-205ENST00000616288 CLSTN1O94985 981 aa15.2■□□□□ 0.02
PPP4R3B-205ENST00000616288 CASP14P31944 242 aa15.2■□□□□ 0.02
PPP4R3B-205ENST00000616288 SLC7A5Q01650 507 aa15.2■□□□□ 0.02
PPP4R3B-205ENST00000616288 CACNA2D4Q7Z3S7 1137 aa15.2■□□□□ 0.02
PPP4R3B-205ENST00000616288 ZRANB1Q9UGI0 708 aa15.2■□□□□ 0.02
PPP4R3B-205ENST00000616288 MTIF2P46199 727 aaKnown RBP15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 C2orf54Q08AI8 447 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 EHD4Q9H223 541 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 CLIC4Q9Y696 253 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 PFDN1O60925 122 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 XBP1P17861 261 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 SH2D3CQ8N5H7 860 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 COG1Q8WTW3 980 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 TTC14Q96N46 770 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 ACTR5Q9H9F9 607 aaPredicted RBP15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 SBNO1A3KN83 1393 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 LRRIQ3A6PVS8 624 aaPredicted RBP15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 EIF3HO15372 352 aaKnown RBP eCLIP15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 ZPR1O75312 459 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 MYBL1P10243 752 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 NAA16Q6N069 864 aaPredicted RBP15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 HIP1RO75146 1068 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 GUCY1A3Q02108 690 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 RESTQ13127 1097 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 TAF11Q15544 211 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 NBPF20Q3BBV1 942 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 SAMD9Q5K651 1589 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 IL17RAQ96F46 866 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 IL25Q9H293 177 aa15.19■□□□□ 0.02
PPP4R3B-205ENST00000616288 PRDM15P57071 1507 aaPredicted RBP15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 SLC30A9Q6PML9 568 aa15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 NME9Q86XW9 330 aa15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 IFT20Q8IY31 132 aa15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 RNF168Q8IYW5 571 aaPredicted RBP15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 STAG1Q8WVM7 1258 aa15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 VCXQ9H320 206 aa15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 MAPK8IP1Q9UQF2 711 aa15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 USH1CQ9Y6N9 552 aa15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 POLR2DO15514 142 aaKnown RBP15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 NR1D1P20393 614 aa15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 RBL2Q08999 1139 aa15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 FAM133BQ5BKY9 247 aaKnown RBP15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 NOA1Q8NC60 698 aaKnown RBP15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 SPDYE1Q8NFV5 336 aaPredicted RBP15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 WDR66Q8TBY9 1149 aa15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 SLC40A1Q9NP59 571 aa15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 PCDHA5Q9Y5H7 936 aa15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 BACH1O14867 736 aa15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 DHX32Q7L7V1 743 aaKnown RBP15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 TAB2Q9NYJ8 693 aa15.18■□□□□ 0.02
PPP4R3B-205ENST00000616288 PI4KAP2A4QPH2 592 aa15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 CETN3O15182 167 aa15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 PI4KAP1Q8N8J0 262 aa15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 RPGRIP1Q96KN7 1286 aa15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 BIN2Q9UBW5 565 aaPredicted RBP15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 IKBKBO14920 756 aa15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 PFKFB2O60825 505 aa15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 PDHBP11177 359 aa15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 PRPF4BQ13523 1007 aaKnown RBP15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 RASIP1Q5U651 963 aa15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 NBPF3Q9H094 633 aa15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 NSD2O96028 1365 aa15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 SYNMO15061 1565 aa15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 RXRAP19793 462 aa15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 GSCP56915 257 aaPredicted RBP15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 TRAF1Q13077 416 aa15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 KRT71Q3SY84 523 aa15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 KAT2BQ92831 832 aa15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 IFT74Q96LB3 600 aa15.17■□□□□ 0.02
PPP4R3B-205ENST00000616288 LUC7L3O95232 432 aaKnown RBP15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 GPTP24298 496 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 PAK2Q13177 524 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 TSNAXIP1Q2TAA8 658 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 KANK3Q6NY19 840 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 CEP128Q6ZU80 1094 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 ZKSCAN4Q969J2 545 aaPredicted RBP15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 TRIM47Q96LD4 638 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 MARCH6O60337 910 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 SNUPNO95149 360 aaKnown RBP15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 BRAPQ7Z569 592 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 KLHL7Q8IXQ5 586 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 AMOTL1Q8IY63 956 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 NOP53Q9NZM5 478 aaKnown RBP15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 ABCA10Q8WWZ4 1543 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 COBLO75128 1261 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 IARSP41252 1262 aaKnown RBP15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 SEC24CP53992 1094 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 DIXDC1Q155Q3 683 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 ARMC3Q5W041 872 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 KCNV2Q8TDN2 545 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 ETAA1Q9NY74 926 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 USP5P45974 858 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 SPAG1Q07617 926 aa15.16■□□□□ 0.02
PPP4R3B-205ENST00000616288 MLKLQ8NB16 471 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms