RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 JRKLQ9Y4A0 524 aa15.02■□□□□ -0
MSH6-214ENST00000616033 FAM208AQ9UK61 1670 aaKnown RBP15.02■□□□□ -0
MSH6-214ENST00000616033 C3P01024 1663 aa15.02■□□□□ -0
MSH6-214ENST00000616033 PXDNLA1KZ92 1463 aa15.02■□□□□ -0
MSH6-214ENST00000616033 ZNF213O14771 459 aa15.02■□□□□ -0
MSH6-214ENST00000616033 CSB-PGBD3P0DP91 1061 aa15.02■□□□□ -0
MSH6-214ENST00000616033 METAP2P50579 478 aaKnown RBP eCLIP15.02■□□□□ -0
MSH6-214ENST00000616033 VSNL1P62760 191 aa15.02■□□□□ -0
MSH6-214ENST00000616033 GSPT2Q8IYD1 628 aaKnown RBP15.02■□□□□ -0
MSH6-214ENST00000616033 SLC35F6Q8N357 371 aa15.02■□□□□ -0
MSH6-214ENST00000616033 EEF2KMTQ96G04 330 aa15.02■□□□□ -0
MSH6-214ENST00000616033 DEF6Q9H4E7 631 aa15.02■□□□□ -0
MSH6-214ENST00000616033 ZNF496Q96IT1 587 aaPredicted RBP15.02□□□□□ -0.01
MSH6-214ENST00000616033 MAPK8IP1Q9UQF2 711 aa15.02□□□□□ -0.01
MSH6-214ENST00000616033 NEDD4P46934 1319 aa15.02□□□□□ -0.01
MSH6-214ENST00000616033 hCG_1642624A0A1W2PR95 340 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 RNF113AO15541 343 aaKnown RBP15.01□□□□□ -0.01
MSH6-214ENST00000616033 SLC39A14Q15043 492 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 TTC39AQ5SRH9 613 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 TMED8Q6PL24 325 aaPredicted RBP15.01□□□□□ -0.01
MSH6-214ENST00000616033 KRT28Q7Z3Y7 464 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 TTC5Q8N0Z6 440 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 MICALL1Q8N3F8 863 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 IGSF22Q8N9C0 903 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 A0A1B0GUL7 405 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 B4E1Z4 1266 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 IKBKBO14920 756 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 ADORA1P30542 326 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 RBL2Q08999 1139 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 TTC31Q49AM3 519 aaPredicted RBP15.01□□□□□ -0.01
MSH6-214ENST00000616033 RAD9BQ6WBX8 426 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 USP49Q70CQ1 688 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 HDXQ7Z353 690 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 NKX2-3Q8TAU0 364 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 FAM204AQ9H8W3 233 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 HOOK1Q9UJC3 728 aaKnown RBP15.01□□□□□ -0.01
MSH6-214ENST00000616033 GUCA1BQ9UMX6 200 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 SETD1AO15047 1707 aaKnown RBP15.01□□□□□ -0.01
MSH6-214ENST00000616033 NOM1Q5C9Z4 860 aaKnown RBP15.01□□□□□ -0.01
MSH6-214ENST00000616033 ATL3Q6DD88 541 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 JMYQ8N9B5 988 aa15.01□□□□□ -0.01
MSH6-214ENST00000616033 BTBD18B2RXH4 712 aa15□□□□□ -0.01
MSH6-214ENST00000616033 ERLIN1O75477 346 aa15□□□□□ -0.01
MSH6-214ENST00000616033 EIF3JO75822 258 aaKnown RBP15□□□□□ -0.01
MSH6-214ENST00000616033 TMEM139Q8IV31 216 aa15□□□□□ -0.01
MSH6-214ENST00000616033 EXOC4Q96A65 974 aa15□□□□□ -0.01
MSH6-214ENST00000616033 PUS7LQ9H0K6 701 aaKnown RBP15□□□□□ -0.01
MSH6-214ENST00000616033 BABAM1Q9NWV8 329 aa15□□□□□ -0.01
MSH6-214ENST00000616033 CUTAO60888 179 aa15□□□□□ -0.01
MSH6-214ENST00000616033 IDH1O75874 414 aaKnown RBP15□□□□□ -0.01
MSH6-214ENST00000616033 GCP02774 474 aa15□□□□□ -0.01
MSH6-214ENST00000616033 HOXB7P09629 217 aa15□□□□□ -0.01
MSH6-214ENST00000616033 BRAPQ7Z569 592 aa15□□□□□ -0.01
MSH6-214ENST00000616033 SRGAP1Q7Z6B7 1085 aa15□□□□□ -0.01
MSH6-214ENST00000616033 NOA1Q8NC60 698 aaKnown RBP15□□□□□ -0.01
MSH6-214ENST00000616033 SLF1Q9BQI6 1058 aa15□□□□□ -0.01
MSH6-214ENST00000616033 METTL22Q9BUU2 404 aaPredicted RBP15□□□□□ -0.01
MSH6-214ENST00000616033 EIF3CLB5ME19 914 aaKnown RBP14.99□□□□□ -0.01
MSH6-214ENST00000616033 AKR1B15C9JRZ8 316 aaPredicted RBP14.99□□□□□ -0.01
MSH6-214ENST00000616033 CHRM1P11229 460 aaPredicted RBP14.99□□□□□ -0.01
MSH6-214ENST00000616033 ATF3P18847 181 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 NOP2P46087 812 aaKnown RBP14.99□□□□□ -0.01
MSH6-214ENST00000616033 RSRC2Q7L4I2 434 aaKnown RBP14.99□□□□□ -0.01
MSH6-214ENST00000616033 PACS2Q86VP3 889 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 NCOA7Q8NI08 942 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 NUP133Q8WUM0 1156 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 IP6K1Q92551 441 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 EIF3CQ99613 913 aaKnown RBP14.99□□□□□ -0.01
MSH6-214ENST00000616033 ANKZF1Q9H8Y5 726 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 COPRSQ9NQ92 184 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 CCDC151A5D8V7 595 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 CLGNO14967 610 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 CASP14P31944 242 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 PDIA6Q15084 440 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 SLC9C2Q5TAH2 1124 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 ZNF790Q6PG37 636 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 KIFC2Q96AC6 838 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 BPIFA3Q9BQP9 254 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 VPS16Q9H269 839 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 C19orf44Q9H6X5 657 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 TRIM10Q9UDY6 481 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 MAN1B1Q9UKM7 699 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 HPS5Q9UPZ3 1129 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 SALL1Q9NSC2 1324 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 MON2Q7Z3U7 1717 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 SRGAP2O75044 1071 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 IARSP41252 1262 aaKnown RBP14.99□□□□□ -0.01
MSH6-214ENST00000616033 CASP8Q14790 479 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 ZMYM1Q5SVZ6 1142 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 ANKRD24Q8TF21 1146 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 DSCC1Q9BVC3 393 aa14.99□□□□□ -0.01
MSH6-214ENST00000616033 CTAGE9A4FU28 777 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 STX10O60499 249 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 SLC20A2Q08357 652 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 MUM1L1Q5H9M0 696 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 TEX13AQ9BXU3 409 aaPredicted RBP14.98□□□□□ -0.01
MSH6-214ENST00000616033 HDAC6Q9UBN7 1215 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 AKAP2Q9Y2D5 859 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 AXIN2Q9Y2T1 843 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 CTAGE15A4D2H0 777 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms