RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 MAFGO15525 162 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 NLRP7Q8WX94 980 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 DCTPP1Q9H773 170 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 H0YC42 278 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 SKIP12755 728 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 RAB3GAP1Q15042 981 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 FBXO41Q8TF61 875 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 RNF216Q9NWF9 866 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-211ENST00000615798 CWC27Q6UX04 472 aaKnown RBP10.34□□□□□ -0.75
COL12A1-211ENST00000615798 DBNLQ9UJU6 430 aaKnown RBP10.34□□□□□ -0.75
COL12A1-211ENST00000615798 SSH2Q76I76 1423 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 ARHGAP44Q17R89 818 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 EDC4Q6P2E9 1401 aaKnown RBP10.34□□□□□ -0.75
COL12A1-211ENST00000615798 TLK2Q86UE8 772 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 CEP19Q96LK0 163 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 ANKFY1Q9P2R3 1169 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 NUTM2FA1L443 756 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 HOXB7P09629 217 aa10.34□□□□□ -0.75
COL12A1-211ENST00000615798 BTBD11A6QL63 1104 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 TMED10P49755 219 aaKnown RBP10.33□□□□□ -0.76
COL12A1-211ENST00000615798 PSMD2Q13200 908 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 KRT3P12035 628 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 KRT5P13647 590 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.33□□□□□ -0.76
COL12A1-211ENST00000615798 C1orf115Q9H7X2 142 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 ZNF711Q9Y462 761 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 CROCC2H7BZ55 1655 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 OCA2Q04671 838 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 FLT4P35916 1363 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 TMEM191CA6NGB0 347 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 KDM4AO75164 1064 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 TMEM191BP0C7N4 346 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 GOLGA6BA6NDN3 693 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 STK3Q13188 491 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 AACSQ86V21 672 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 NME8Q8N427 588 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 KRT13P13646 458 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 GSTA5Q7RTV2 222 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 ANKLE2Q86XL3 938 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 CCDC26Q8TAB7 109 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 TXLNGQ9NUQ3 528 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 NBPF7P0C2Y1 421 aaPredicted RBP10.33□□□□□ -0.76
COL12A1-211ENST00000615798 CTAGE3PQ8IX95 158 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 TRIML2Q8N7C3 387 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 HELLSQ9NRZ9 838 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 SLC24A3Q9HC58 644 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 MIS12Q9H081 205 aa10.33□□□□□ -0.76
COL12A1-211ENST00000615798 DDX41Q9UJV9 622 aaKnown RBP10.33□□□□□ -0.76
COL12A1-211ENST00000615798 OAS2P29728 719 aaKnown RBP10.32□□□□□ -0.76
COL12A1-211ENST00000615798 ST13P50502 369 aaKnown RBP10.32□□□□□ -0.76
COL12A1-211ENST00000615798 CCDC93Q567U6 631 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 IQCA1Q86XH1 822 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 CNGB3Q9NQW8 809 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 TET3O43151 1660 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 ECHDC1Q9NTX5 307 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 NLRP2Q9NX02 1062 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 MAP3K7O43318 606 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 MPP4Q96JB8 637 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 IDI1Q13907 227 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 TRIM6Q9C030 488 aaPredicted RBP10.32□□□□□ -0.76
COL12A1-211ENST00000615798 ZNF287Q9HBT7 754 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 KRT8P05787 483 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 PHBP35232 272 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 NBPF20Q3BBV1 942 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 C10orf88Q9H8K7 445 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 UNC13BO14795 1591 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 ALDH1L1O75891 902 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 ZBTB40Q9NUA8 1239 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 CARSP49589 748 aaKnown RBP10.32□□□□□ -0.76
COL12A1-211ENST00000615798 KANK3Q6NY19 840 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 CEP70Q8NHQ1 597 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 MYH9P35579 1960 aaKnown RBP10.32□□□□□ -0.76
COL12A1-211ENST00000615798 KRT83P78385 493 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 MYRIPQ8NFW9 859 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 KIAA0232Q92628 1395 aa10.32□□□□□ -0.76
COL12A1-211ENST00000615798 E7EVH7 732 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 MCF2LO15068 1137 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 NBNO60934 754 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 CCDC122Q5T0U0 273 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 TTC1Q99614 292 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 HDAC9Q9UKV0 1011 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 GMEB1Q9Y692 573 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 ARHGAP42A6NI28 874 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 RPSAP08865 295 aaKnown RBP10.31□□□□□ -0.76
COL12A1-211ENST00000615798 IFT20Q8IY31 132 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 MBIPQ9NS73 344 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 STX6O43752 255 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 AKR1B10O60218 316 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 BMP15O95972 392 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 CCDC25Q86WR0 208 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 TEX13AQ9BXU3 409 aaPredicted RBP10.31□□□□□ -0.76
COL12A1-211ENST00000615798 CEP126Q9P2H0 1117 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 RTL1A6NKG5 1358 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 APOA1P02647 267 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 RHOXF2BP0C7M4 288 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 STX17P56962 302 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 CUL4BQ13620 913 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 SRGAP1Q7Z6B7 1085 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 RHOXF2Q9BQY4 288 aa10.31□□□□□ -0.76
COL12A1-211ENST00000615798 PTPRTO14522 1441 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms