RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 MAST3O60307 1309 aa13.04□□□□□ -0.32
COL4A1-205ENST00000615732 SEC24BO95487 1268 aa13.03□□□□□ -0.32
COL4A1-205ENST00000615732 GSPT1P15170 499 aaKnown RBP13.03□□□□□ -0.32
COL4A1-205ENST00000615732 MX1P20591 662 aa13.03□□□□□ -0.32
COL4A1-205ENST00000615732 PRDX5P30044 214 aa13.03□□□□□ -0.32
COL4A1-205ENST00000615732 FXR1P51114 621 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL4A1-205ENST00000615732 HDLBPQ00341 1268 aaKnown RBP13.03□□□□□ -0.32
COL4A1-205ENST00000615732 TCP10Q12799 353 aa13.03□□□□□ -0.32
COL4A1-205ENST00000615732 MIGA2Q7L4E1 593 aa13.03□□□□□ -0.32
COL4A1-205ENST00000615732 ATG9AQ7Z3C6 839 aa13.03□□□□□ -0.32
COL4A1-205ENST00000615732 RHPN1Q8TCX5 695 aa13.03□□□□□ -0.32
COL4A1-205ENST00000615732 LPIN2Q92539 896 aa13.03□□□□□ -0.32
COL4A1-205ENST00000615732 TMEM106CQ9BVX2 250 aa13.03□□□□□ -0.32
COL4A1-205ENST00000615732 PA2G4Q9UQ80 394 aaKnown RBP13.03□□□□□ -0.32
COL4A1-205ENST00000615732 NOP58Q9Y2X3 529 aaKnown RBP13.03□□□□□ -0.32
COL4A1-205ENST00000615732 DAGLAQ9Y4D2 1042 aa13.03□□□□□ -0.32
COL4A1-205ENST00000615732 BTBD19C9JJ37 291 aa13.02□□□□□ -0.33
COL4A1-205ENST00000615732 MYCP01106 439 aaPredicted RBP13.02□□□□□ -0.33
COL4A1-205ENST00000615732 PDE1AP54750 535 aa13.02□□□□□ -0.33
COL4A1-205ENST00000615732 G3BP1Q13283 466 aaKnown RBP eCLIP13.02□□□□□ -0.33
COL4A1-205ENST00000615732 ATP2B3Q16720 1220 aa13.02□□□□□ -0.33
COL4A1-205ENST00000615732 SH3TC2Q8TF17 1288 aa13.02□□□□□ -0.33
COL4A1-205ENST00000615732 OSBPL3Q9H4L5 887 aa13.02□□□□□ -0.33
COL4A1-205ENST00000615732 IL1RAPL2Q9NP60 686 aa13.02□□□□□ -0.33
COL4A1-205ENST00000615732 RPAP1Q9BWH6 1393 aaPredicted RBP13.02□□□□□ -0.33
COL4A1-205ENST00000615732 IRF6O14896 467 aa13.01□□□□□ -0.33
COL4A1-205ENST00000615732 TLR2O60603 784 aa13.01□□□□□ -0.33
COL4A1-205ENST00000615732 INPP5BP32019 993 aa13.01□□□□□ -0.33
COL4A1-205ENST00000615732 PHKA1P46020 1223 aa13.01□□□□□ -0.33
COL4A1-205ENST00000615732 LACTBP83111 547 aaPredicted RBP13.01□□□□□ -0.33
COL4A1-205ENST00000615732 NFIAQ12857 509 aa13.01□□□□□ -0.33
COL4A1-205ENST00000615732 ARHGEF6Q15052 776 aa13.01□□□□□ -0.33
COL4A1-205ENST00000615732 SLC4A8Q2Y0W8 1093 aa13.01□□□□□ -0.33
COL4A1-205ENST00000615732 HHIPL2Q6UWX4 724 aa13.01□□□□□ -0.33
COL4A1-205ENST00000615732 NBPF11Q86T75 865 aa13.01□□□□□ -0.33
COL4A1-205ENST00000615732 FAM83AQ86UY5 434 aa13.01□□□□□ -0.33
COL4A1-205ENST00000615732 GPATCH3Q96I76 525 aa13.01□□□□□ -0.33
COL4A1-205ENST00000615732 TBC1D32Q96NH3 1257 aa13.01□□□□□ -0.33
COL4A1-205ENST00000615732 COLQQ9Y215 455 aaPredicted RBP13.01□□□□□ -0.33
COL4A1-205ENST00000615732 SUGT1Q9Y2Z0 365 aa13.01□□□□□ -0.33
COL4A1-205ENST00000615732 CETPP11597 493 aa13□□□□□ -0.33
COL4A1-205ENST00000615732 ADORA1P30542 326 aa13□□□□□ -0.33
COL4A1-205ENST00000615732 DCAF15Q66K64 600 aa13□□□□□ -0.33
COL4A1-205ENST00000615732 CDC42EP5Q6NZY7 148 aa13□□□□□ -0.33
COL4A1-205ENST00000615732 TBC1D9Q6ZT07 1266 aa13□□□□□ -0.33
COL4A1-205ENST00000615732 ERO1BQ86YB8 467 aa13□□□□□ -0.33
COL4A1-205ENST00000615732 CLASRPQ8N2M8 674 aaKnown RBP13□□□□□ -0.33
COL4A1-205ENST00000615732 WDR66Q8TBY9 1149 aa13□□□□□ -0.33
COL4A1-205ENST00000615732 ZNF341Q9BYN7 854 aa13□□□□□ -0.33
COL4A1-205ENST00000615732 C22orf23Q9BZE7 217 aa13□□□□□ -0.33
COL4A1-205ENST00000615732 SZT2Q5T011 3432 aa13□□□□□ -0.33
COL4A1-205ENST00000615732 SDSP20132 328 aa12.99□□□□□ -0.33
COL4A1-205ENST00000615732 CTGFP29279 349 aa12.99□□□□□ -0.33
COL4A1-205ENST00000615732 PPIL2Q13356 520 aa12.99□□□□□ -0.33
COL4A1-205ENST00000615732 SNAPC2Q13487 334 aa12.99□□□□□ -0.33
COL4A1-205ENST00000615732 FKBP1CQ5VVH2 108 aa12.99□□□□□ -0.33
COL4A1-205ENST00000615732 ZCCHC17Q9NP64 241 aaKnown RBP12.99□□□□□ -0.33
COL4A1-205ENST00000615732 STAP2Q9UGK3 403 aa12.99□□□□□ -0.33
COL4A1-205ENST00000615732 MYH13Q9UKX3 1938 aa12.99□□□□□ -0.33
COL4A1-205ENST00000615732 SALL3Q9BXA9 1300 aa12.98□□□□□ -0.33
COL4A1-205ENST00000615732 LDHBP07195 334 aaKnown RBP12.98□□□□□ -0.33
COL4A1-205ENST00000615732 IFIT2P09913 472 aaKnown RBP12.98□□□□□ -0.33
COL4A1-205ENST00000615732 BECN1Q14457 450 aa12.98□□□□□ -0.33
COL4A1-205ENST00000615732 KIF22Q14807 665 aa12.98□□□□□ -0.33
COL4A1-205ENST00000615732 ZFPM1Q8IX07 1006 aa12.98□□□□□ -0.33
COL4A1-205ENST00000615732 SHISA4Q96DD7 197 aa12.98□□□□□ -0.33
COL4A1-205ENST00000615732 HOOK2Q96ED9 719 aa12.98□□□□□ -0.33
COL4A1-205ENST00000615732 MRIQ9BWK5 157 aa12.98□□□□□ -0.33
COL4A1-205ENST00000615732 CEP126Q9P2H0 1117 aa12.98□□□□□ -0.33
COL4A1-205ENST00000615732 FAM198AQ9UFP1 575 aa12.98□□□□□ -0.33
COL4A1-205ENST00000615732 RANBP2P49792 3224 aaKnown RBP12.98□□□□□ -0.33
COL4A1-205ENST00000615732 ADGRA2Q96PE1 1338 aa12.97□□□□□ -0.33
COL4A1-205ENST00000615732 TRIM6-TRIM34B2RNG4 842 aa12.97□□□□□ -0.33
COL4A1-205ENST00000615732 H0YGN5 161 aa12.97□□□□□ -0.33
COL4A1-205ENST00000615732 WDHD1O75717 1129 aaPredicted RBP12.97□□□□□ -0.33
COL4A1-205ENST00000615732 CIAO1O76071 339 aa12.97□□□□□ -0.33
COL4A1-205ENST00000615732 SLURP2P0DP57 97 aa12.97□□□□□ -0.33
COL4A1-205ENST00000615732 TSHZ3Q63HK5 1081 aa12.97□□□□□ -0.33
COL4A1-205ENST00000615732 C17orf99Q6UX52 265 aa12.97□□□□□ -0.33
COL4A1-205ENST00000615732 FAM151AQ8WW52 585 aa12.97□□□□□ -0.33
COL4A1-205ENST00000615732 USP40Q9NVE5 1235 aa12.97□□□□□ -0.33
COL4A1-205ENST00000615732 CPA4Q9UI42 421 aa12.97□□□□□ -0.33
COL4A1-205ENST00000615732 CEP290O15078 2479 aa12.96□□□□□ -0.33
COL4A1-205ENST00000615732 ERC2O15083 957 aa12.96□□□□□ -0.33
COL4A1-205ENST00000615732 GNRH1P01148 92 aa12.96□□□□□ -0.33
COL4A1-205ENST00000615732 IL15P40933 162 aaPredicted RBP12.96□□□□□ -0.33
COL4A1-205ENST00000615732 PPATQ06203 517 aa12.96□□□□□ -0.33
COL4A1-205ENST00000615732 RASGRF1Q13972 1273 aa12.96□□□□□ -0.33
COL4A1-205ENST00000615732 MTFR1Q15390 333 aa12.96□□□□□ -0.33
COL4A1-205ENST00000615732 CCDC102BQ68D86 513 aa12.96□□□□□ -0.33
COL4A1-205ENST00000615732 AACSQ86V21 672 aa12.96□□□□□ -0.33
COL4A1-205ENST00000615732 RILPL2Q969X0 211 aa12.96□□□□□ -0.33
COL4A1-205ENST00000615732 TRIM47Q96LD4 638 aa12.96□□□□□ -0.33
COL4A1-205ENST00000615732 COPRSQ9NQ92 184 aa12.96□□□□□ -0.33
COL4A1-205ENST00000615732 GNL3LQ9NVN8 582 aaKnown RBP12.96□□□□□ -0.33
COL4A1-205ENST00000615732 DENND2AQ9ULE3 1009 aa12.96□□□□□ -0.33
COL4A1-205ENST00000615732 RFX7Q2KHR2 1363 aa12.95□□□□□ -0.34
COL4A1-205ENST00000615732 ATRNL1Q5VV63 1379 aa12.95□□□□□ -0.34
COL4A1-205ENST00000615732 TTC41PQ6P2S7 1318 aa12.95□□□□□ -0.34
COL4A1-205ENST00000615732 SALL1Q9NSC2 1324 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms