RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 PCDHAC2Q9Y5I4 1007 aa9.66□□□□□ -0.86
PCDH9-205ENST00000614931 MROH7-TTC4A0A0A0MT08 1334 aa9.65□□□□□ -0.86
PCDH9-205ENST00000614931 GAKO14976 1311 aa9.65□□□□□ -0.86
PCDH9-205ENST00000614931 FAM155AB1AL88 458 aaPredicted RBP9.65□□□□□ -0.86
PCDH9-205ENST00000614931 HSPA8P11142 646 aaKnown RBP9.65□□□□□ -0.86
PCDH9-205ENST00000614931 FKBP1BP68106 108 aa9.65□□□□□ -0.86
PCDH9-205ENST00000614931 NOGQ13253 232 aa9.65□□□□□ -0.86
PCDH9-205ENST00000614931 TNS4Q8IZW8 715 aa9.65□□□□□ -0.86
PCDH9-205ENST00000614931 ZGPATQ8N5A5 531 aaKnown RBP9.65□□□□□ -0.86
PCDH9-205ENST00000614931 MTMR14Q8NCE2 650 aa9.65□□□□□ -0.86
PCDH9-205ENST00000614931 EPB41L4AQ9HCS5 686 aaPredicted RBP9.65□□□□□ -0.86
PCDH9-205ENST00000614931 ANO2Q9NQ90 1003 aa9.65□□□□□ -0.86
PCDH9-205ENST00000614931 TTF2Q9UNY4 1162 aaKnown RBP9.65□□□□□ -0.86
PCDH9-205ENST00000614931 SCAF8Q9UPN6 1271 aaKnown RBP9.65□□□□□ -0.86
PCDH9-205ENST00000614931 PAPPA2Q9BXP8 1791 aa9.65□□□□□ -0.87
PCDH9-205ENST00000614931 PRKAB2O43741 272 aa9.64□□□□□ -0.87
PCDH9-205ENST00000614931 LBX1P52954 281 aa9.64□□□□□ -0.87
PCDH9-205ENST00000614931 DLGAP5Q15398 846 aa9.64□□□□□ -0.87
PCDH9-205ENST00000614931 LRRFIP1Q32MZ4 808 aaKnown RBP9.64□□□□□ -0.87
PCDH9-205ENST00000614931 CCDC102AQ96A19 550 aa9.64□□□□□ -0.87
PCDH9-205ENST00000614931 TBC1D32Q96NH3 1257 aa9.64□□□□□ -0.87
PCDH9-205ENST00000614931 STRBPQ96SI9 672 aaKnown RBP9.64□□□□□ -0.87
PCDH9-205ENST00000614931 SUGT1Q9Y2Z0 365 aa9.64□□□□□ -0.87
PCDH9-205ENST00000614931 DAGLAQ9Y4D2 1042 aa9.64□□□□□ -0.87
PCDH9-205ENST00000614931 TAF6LQ9Y6J9 622 aa9.64□□□□□ -0.87
PCDH9-205ENST00000614931 MYH8P13535 1937 aa9.64□□□□□ -0.87
PCDH9-205ENST00000614931 MAGEB6P1A0A0J9YX57 407 aa9.63□□□□□ -0.87
PCDH9-205ENST00000614931 REC8O95072 547 aa9.63□□□□□ -0.87
PCDH9-205ENST00000614931 HSPD1P10809 573 aaKnown RBP9.63□□□□□ -0.87
PCDH9-205ENST00000614931 BTDP43251 543 aa9.63□□□□□ -0.87
PCDH9-205ENST00000614931 CRKP46108 304 aa9.63□□□□□ -0.87
PCDH9-205ENST00000614931 ZNF157P51786 506 aaPredicted RBP9.63□□□□□ -0.87
PCDH9-205ENST00000614931 RHBDL3P58872 404 aa9.63□□□□□ -0.87
PCDH9-205ENST00000614931 PRAMEF18Q5VWM3 479 aa9.63□□□□□ -0.87
PCDH9-205ENST00000614931 APOBEC3FQ8IUX4 373 aaKnown RBP9.63□□□□□ -0.87
PCDH9-205ENST00000614931 MAP4K1Q92918 833 aa9.63□□□□□ -0.87
PCDH9-205ENST00000614931 ZIC5Q96T25 663 aa9.63□□□□□ -0.87
PCDH9-205ENST00000614931 BEGAINQ9BUH8 593 aa9.63□□□□□ -0.87
PCDH9-205ENST00000614931 AATFQ9NY61 560 aaKnown RBP eCLIP9.63□□□□□ -0.87
PCDH9-205ENST00000614931 PALD1Q9ULE6 856 aa9.63□□□□□ -0.87
PCDH9-205ENST00000614931 RBM8AQ9Y5S9 174 aaKnown RBP9.63□□□□□ -0.87
PCDH9-205ENST00000614931 GPR75-ASB3A0A0A6YYF3 556 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 SPDYE2BA6NHP3 402 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 GSG1L2A8MUP6 293 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 SMIM22K7EJ46 135 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 CA12O43570 354 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 IGSF3O75054 1194 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 SLC10A3P09131 477 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 SPDYE6P0CI01 402 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 PPP4CP60510 307 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 GSTO1P78417 241 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 EVX2Q03828 476 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 COL9A3Q14050 684 aaPredicted RBP9.62□□□□□ -0.87
PCDH9-205ENST00000614931 CFAP100Q494V2 611 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 HHIPL2Q6UWX4 724 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 MOB2Q70IA6 237 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 SH3RF3Q8TEJ3 882 aaPredicted RBP9.62□□□□□ -0.87
PCDH9-205ENST00000614931 SDR42E1Q8WUS8 393 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 FAM163AQ96GL9 167 aaPredicted RBP9.62□□□□□ -0.87
PCDH9-205ENST00000614931 PRMT6Q96LA8 375 aaPredicted RBP9.62□□□□□ -0.87
PCDH9-205ENST00000614931 KIF2CQ99661 725 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 DSCC1Q9BVC3 393 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 C22orf23Q9BZE7 217 aa9.62□□□□□ -0.87
PCDH9-205ENST00000614931 MYO1BO43795 1136 aa9.61□□□□□ -0.87
PCDH9-205ENST00000614931 LDHCP07864 332 aa9.61□□□□□ -0.87
PCDH9-205ENST00000614931 NF2P35240 595 aa9.61□□□□□ -0.87
PCDH9-205ENST00000614931 RBM25P49756 843 aaKnown RBP9.61□□□□□ -0.87
PCDH9-205ENST00000614931 KIF23Q02241 960 aaPredicted RBP9.61□□□□□ -0.87
PCDH9-205ENST00000614931 NECTIN1Q15223 517 aa9.61□□□□□ -0.87
PCDH9-205ENST00000614931 APOBEC3HQ6NTF7 200 aaKnown RBP9.61□□□□□ -0.87
PCDH9-205ENST00000614931 KIAA1211Q6ZU35 1233 aa9.61□□□□□ -0.87
PCDH9-205ENST00000614931 RASEFQ8IZ41 740 aa9.61□□□□□ -0.87
PCDH9-205ENST00000614931 TEKT1Q969V4 418 aa9.61□□□□□ -0.87
PCDH9-205ENST00000614931 NBPF3Q9H094 633 aa9.61□□□□□ -0.87
PCDH9-205ENST00000614931 DEFB129Q9H1M3 183 aa9.61□□□□□ -0.87
PCDH9-205ENST00000614931 SERPINA10Q9UK55 444 aa9.61□□□□□ -0.87
PCDH9-205ENST00000614931 PPP2R3BQ9Y5P8 575 aa9.61□□□□□ -0.87
PCDH9-205ENST00000614931 TACC3Q9Y6A5 838 aa9.61□□□□□ -0.87
PCDH9-205ENST00000614931 SLC4A4Q9Y6R1 1079 aa9.61□□□□□ -0.87
PCDH9-205ENST00000614931 UBE2Q2LH0YL09 131 aa9.6□□□□□ -0.87
PCDH9-205ENST00000614931 SLC27A2O14975 620 aa9.6□□□□□ -0.87
PCDH9-205ENST00000614931 EPB41L2O43491 1005 aaKnown RBP9.6□□□□□ -0.87
PCDH9-205ENST00000614931 HSPA4P34932 840 aa9.6□□□□□ -0.87
PCDH9-205ENST00000614931 HDLBPQ00341 1268 aaKnown RBP9.6□□□□□ -0.87
PCDH9-205ENST00000614931 CREB3L3Q68CJ9 461 aa9.6□□□□□ -0.87
PCDH9-205ENST00000614931 CDC42EP5Q6NZY7 148 aa9.6□□□□□ -0.87
PCDH9-205ENST00000614931 TMED8Q6PL24 325 aaPredicted RBP9.6□□□□□ -0.87
PCDH9-205ENST00000614931 RASAL3Q86YV0 1011 aa9.6□□□□□ -0.87
PCDH9-205ENST00000614931 REM2Q8IYK8 340 aaPredicted RBP9.6□□□□□ -0.87
PCDH9-205ENST00000614931 KCNB2Q92953 911 aa9.6□□□□□ -0.87
PCDH9-205ENST00000614931 ZDHHC15Q96MV8 337 aa9.6□□□□□ -0.87
PCDH9-205ENST00000614931 DDX4Q9NQI0 724 aaKnown RBP9.6□□□□□ -0.87
PCDH9-205ENST00000614931 SNX14Q9Y5W7 946 aa9.6□□□□□ -0.87
PCDH9-205ENST00000614931 RPAP1Q9BWH6 1393 aaPredicted RBP9.6□□□□□ -0.87
PCDH9-205ENST00000614931 ZMYM6O95789 1325 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 CYP2D7A0A087X1C5 515 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 CLRN2A0PK11 232 aa9.59□□□□□ -0.87
PCDH9-205ENST00000614931 PATL2C9JE40 543 aaKnown RBP9.59□□□□□ -0.87
PCDH9-205ENST00000614931 WDHD1O75717 1129 aaPredicted RBP9.59□□□□□ -0.87
PCDH9-205ENST00000614931 FGAP02671 866 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms