RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 NLRP12P59046 1061 aa12.95□□□□□ -0.34
ATF3-211ENST00000613954 CCT2P78371 535 aaKnown RBP12.95□□□□□ -0.34
ATF3-211ENST00000613954 PUM3Q15397 648 aaKnown RBP12.95□□□□□ -0.34
ATF3-211ENST00000613954 BRAPQ7Z569 592 aa12.95□□□□□ -0.34
ATF3-211ENST00000613954 ILDR1Q86SU0 546 aaPredicted RBP12.95□□□□□ -0.34
ATF3-211ENST00000613954 NBPF5PQ86XG9 351 aaPredicted RBP12.95□□□□□ -0.34
ATF3-211ENST00000613954 LINC00301Q8NCQ3 95 aa12.95□□□□□ -0.34
ATF3-211ENST00000613954 CDC5LQ99459 802 aaKnown RBP12.95□□□□□ -0.34
ATF3-211ENST00000613954 SRRTQ9BXP5 876 aaKnown RBP12.95□□□□□ -0.34
ATF3-211ENST00000613954 XPO4Q9C0E2 1151 aaKnown RBP12.95□□□□□ -0.34
ATF3-211ENST00000613954 ARGLU1Q9NWB6 273 aaPredicted RBP12.95□□□□□ -0.34
ATF3-211ENST00000613954 IKBKBO14920 756 aa12.94□□□□□ -0.34
ATF3-211ENST00000613954 CCDC93Q567U6 631 aa12.94□□□□□ -0.34
ATF3-211ENST00000613954 ZMYM1Q5SVZ6 1142 aa12.94□□□□□ -0.34
ATF3-211ENST00000613954 TMC6Q7Z403 805 aa12.94□□□□□ -0.34
ATF3-211ENST00000613954 LPIN2Q92539 896 aa12.94□□□□□ -0.34
ATF3-211ENST00000613954 PHLPP2Q6ZVD8 1323 aa12.94□□□□□ -0.34
ATF3-211ENST00000613954 SLC3A2P08195 630 aaKnown RBP12.93□□□□□ -0.34
ATF3-211ENST00000613954 FGFR2P21802 821 aa12.93□□□□□ -0.34
ATF3-211ENST00000613954 FOSBP53539 338 aa12.93□□□□□ -0.34
ATF3-211ENST00000613954 LRRFIP1Q32MZ4 808 aaKnown RBP12.93□□□□□ -0.34
ATF3-211ENST00000613954 TPTE2Q6XPS3 522 aa12.93□□□□□ -0.34
ATF3-211ENST00000613954 ZNF512BQ96KM6 892 aaPredicted RBP12.93□□□□□ -0.34
ATF3-211ENST00000613954 IFNKQ9P0W0 207 aa12.93□□□□□ -0.34
ATF3-211ENST00000613954 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.93□□□□□ -0.34
ATF3-211ENST00000613954 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■□□□ 12.9
ATF3-211ENST00000613954 V9GYY5 206 aaPredicted RBP12.93□□□□□ -0.34
ATF3-211ENST00000613954 ARAP2Q8WZ64 1704 aa12.93□□□□□ -0.34
ATF3-211ENST00000613954 A0A1B0GVL5 298 aa12.93□□□□□ -0.34
ATF3-211ENST00000613954 SPTLC2O15270 562 aa12.93□□□□□ -0.34
ATF3-211ENST00000613954 CBFA2T2O43439 604 aa12.93□□□□□ -0.34
ATF3-211ENST00000613954 MYO1BO43795 1136 aa12.93□□□□□ -0.34
ATF3-211ENST00000613954 TPM1P09493 284 aa12.93□□□□□ -0.34
ATF3-211ENST00000613954 HSPD1P10809 573 aaKnown RBP12.93□□□□□ -0.34
ATF3-211ENST00000613954 SLC5A1P13866 664 aa12.93□□□□□ -0.34
ATF3-211ENST00000613954 NDUFA8P51970 172 aa12.93□□□□□ -0.34
ATF3-211ENST00000613954 DPCR1Q3MIW9 517 aa12.93□□□□□ -0.34
ATF3-211ENST00000613954 ARMCX5Q6P1M9 558 aa12.93□□□□□ -0.34
ATF3-211ENST00000613954 C3orf67Q6ZVT6 689 aa12.93□□□□□ -0.34
ATF3-211ENST00000613954 NAP1L2Q9ULW6 460 aaPredicted RBP12.93□□□□□ -0.34
ATF3-211ENST00000613954 UBR3Q6ZT12 1888 aa12.92□□□□□ -0.34
ATF3-211ENST00000613954 FKBP4Q02790 459 aaKnown RBP eCLIP12.92□□□□□ -0.34
ATF3-211ENST00000613954 SYT10Q6XYQ8 523 aa12.92□□□□□ -0.34
ATF3-211ENST00000613954 SYNE3Q6ZMZ3 975 aa12.92□□□□□ -0.34
ATF3-211ENST00000613954 HELBQ8NG08 1087 aaPredicted RBP12.92□□□□□ -0.34
ATF3-211ENST00000613954 C8orf76Q96K31 380 aa12.92□□□□□ -0.34
ATF3-211ENST00000613954 TIGD1Q96MW7 591 aa12.92□□□□□ -0.34
ATF3-211ENST00000613954 NCOA5Q9HCD5 579 aaKnown RBP12.92□□□□□ -0.34
ATF3-211ENST00000613954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.91□□□□□ -0.34
ATF3-211ENST00000613954 UQCRFS1P1P0C7P4 283 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 RXRBP28702 533 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 ETF1P62495 437 aaKnown RBP12.91□□□□□ -0.34
ATF3-211ENST00000613954 GUCY1B3Q02153 619 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 FCHSD1Q86WN1 690 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 ANKRD18AQ8IVF6 992 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 NLRP3Q96P20 1036 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 CALCOCO1Q9P1Z2 691 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 CASZ1Q86V15 1759 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.91□□□□□ -0.34
ATF3-211ENST00000613954 RNF113AO15541 343 aaKnown RBP12.91□□□□□ -0.34
ATF3-211ENST00000613954 ATP8B1O43520 1251 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 ZNF202O95125 648 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 FDPSP14324 419 aaKnown RBP12.91□□□□□ -0.34
ATF3-211ENST00000613954 CMA1P23946 247 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 SCARF1Q14162 830 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 TXNRD1Q16881 649 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 ERCC6LQ2NKX8 1250 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 MYSM1Q5VVJ2 828 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 HOMER1Q86YM7 354 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 FBXO18Q8NFZ0 1043 aa12.91□□□□□ -0.34
ATF3-211ENST00000613954 A0A087WWV3 80 aa12.9□□□□□ -0.34
ATF3-211ENST00000613954 A0A0U1RQG5 324 aaPredicted RBP12.9□□□□□ -0.34
ATF3-211ENST00000613954 ARID4AP29374 1257 aaPredicted RBP12.9□□□□□ -0.34
ATF3-211ENST00000613954 ZAP70P43403 619 aa12.9□□□□□ -0.34
ATF3-211ENST00000613954 CCDC102BQ68D86 513 aa12.9□□□□□ -0.34
ATF3-211ENST00000613954 UBXN4Q92575 508 aa12.9□□□□□ -0.34
ATF3-211ENST00000613954 FBXW7Q969H0 707 aa12.9□□□□□ -0.34
ATF3-211ENST00000613954 NOL10Q9BSC4 688 aaKnown RBP12.9□□□□□ -0.34
ATF3-211ENST00000613954 ZNF446Q9NWS9 450 aa12.9□□□□□ -0.34
ATF3-211ENST00000613954 NEDD4P46934 1319 aa12.9□□□□□ -0.34
ATF3-211ENST00000613954 PLSCR1O15162 318 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 ZSCAN12O43309 604 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 CHGBP05060 677 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 ZFYP08048 801 aaPredicted RBP12.89□□□□□ -0.35
ATF3-211ENST00000613954 MCAMP43121 646 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 FANCCQ00597 558 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 CHRNDQ07001 517 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 NFIXQ14938 502 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 NCAPHQ15003 741 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 ERCC4Q92889 916 aaPredicted RBP12.89□□□□□ -0.35
ATF3-211ENST00000613954 BSDC1Q9NW68 430 aaPredicted RBP12.89□□□□□ -0.35
ATF3-211ENST00000613954 CLIC4Q9Y696 253 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 MAST3O60307 1309 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 PHKA1P46020 1223 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 CLCN6P51797 869 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 TTF1Q15361 905 aaPredicted RBP12.89□□□□□ -0.35
ATF3-211ENST00000613954 IMMTQ16891 758 aaKnown RBP12.89□□□□□ -0.35
ATF3-211ENST00000613954 ARHGAP29Q52LW3 1261 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 ANO1Q5XXA6 986 aa12.89□□□□□ -0.35
ATF3-211ENST00000613954 TMCO3Q6UWJ1 677 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms