RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 RASEFQ8IZ41 740 aa7.69□□□□□ -1.18
CLCN3-211ENST00000613795 JPH2Q9BR39 696 aaPredicted RBP7.69□□□□□ -1.18
CLCN3-211ENST00000613795 DCTPP1Q9H773 170 aa7.69□□□□□ -1.18
CLCN3-211ENST00000613795 PCDH11XQ9BZA7 1347 aa7.69□□□□□ -1.18
CLCN3-211ENST00000613795 PCDH11YQ9BZA8 1340 aa7.69□□□□□ -1.18
CLCN3-211ENST00000613795 NLRP12P59046 1061 aa7.69□□□□□ -1.18
CLCN3-211ENST00000613795 UBXN1Q04323 297 aa7.69□□□□□ -1.18
CLCN3-211ENST00000613795 RAD51AP2Q09MP3 1159 aa7.69□□□□□ -1.18
CLCN3-211ENST00000613795 IGSF22Q8N9C0 903 aa7.69□□□□□ -1.18
CLCN3-211ENST00000613795 STAG1Q8WVM7 1258 aa7.69□□□□□ -1.18
CLCN3-211ENST00000613795 NGLY1Q96IV0 654 aa7.69□□□□□ -1.18
CLCN3-211ENST00000613795 PDE11AQ9HCR9 933 aa7.69□□□□□ -1.18
CLCN3-211ENST00000613795 MIS18AQ9NYP9 233 aa7.69□□□□□ -1.18
CLCN3-211ENST00000613795 TRAPPC8Q9Y2L5 1435 aa7.69□□□□□ -1.18
CLCN3-211ENST00000613795 TLDC2A0PJX2 215 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 ACTN4O43707 911 aaKnown RBP7.68□□□□□ -1.18
CLCN3-211ENST00000613795 MIER3Q7Z3K6 550 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 GBP7Q8N8V2 638 aaPredicted RBP7.68□□□□□ -1.18
CLCN3-211ENST00000613795 TSNARE1Q96NA8 513 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 MORC2Q9Y6X9 1032 aaPredicted RBP7.68□□□□□ -1.18
CLCN3-211ENST00000613795 ADGBQ8N7X0 1667 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 TBCAO75347 108 aaKnown RBP7.68□□□□□ -1.18
CLCN3-211ENST00000613795 RFC1P35251 1148 aaPredicted RBP7.68□□□□□ -1.18
CLCN3-211ENST00000613795 CALCOCO2Q13137 446 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 DYNC1I2Q13409 638 aaKnown RBP7.68□□□□□ -1.18
CLCN3-211ENST00000613795 E2F4Q16254 413 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 EYA3Q99504 573 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 FAM204AQ9H8W3 233 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 ZMYM4Q5VZL5 1548 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 KRT13P13646 458 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 CTNNA2P26232 953 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 UBA7P41226 1012 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 FBXO31Q5XUX0 539 aaPredicted RBP7.68□□□□□ -1.18
CLCN3-211ENST00000613795 CCDC62Q6P9F0 684 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 APBB1IPQ7Z5R6 666 aaPredicted RBP7.68□□□□□ -1.18
CLCN3-211ENST00000613795 TPX2Q9ULW0 747 aaKnown RBP7.68□□□□□ -1.18
CLCN3-211ENST00000613795 RBM8AQ9Y5S9 174 aaKnown RBP7.68□□□□□ -1.18
CLCN3-211ENST00000613795 CCDC151A5D8V7 595 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 GRM8O00222 908 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 CREB3O43889 395 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 GRIPAP1Q4V328 841 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 ARHGEF2Q92974 986 aaKnown RBP7.68□□□□□ -1.18
CLCN3-211ENST00000613795 GLT8D2Q9H1C3 349 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 TSPYL2Q9H2G4 693 aaPredicted RBP7.68□□□□□ -1.18
CLCN3-211ENST00000613795 GEMIN8Q9NWZ8 242 aaKnown RBP7.68□□□□□ -1.18
CLCN3-211ENST00000613795 DNAJC8O75937 253 aaPredicted RBP7.68□□□□□ -1.18
CLCN3-211ENST00000613795 RASIP1Q5U651 963 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 RUFY3Q7L099 469 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 PLEKHM2Q8IWE5 1019 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 DCAF5Q96JK2 942 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 SPAG5Q96R06 1193 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 SETDB2Q96T68 719 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 NUP58Q9BVL2 599 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 ZBTB40Q9NUA8 1239 aa7.68□□□□□ -1.18
CLCN3-211ENST00000613795 PBRM1Q86U86 1689 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 ZBTB43O43298 467 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 FOXO3O43524 673 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 RNF40O75150 1001 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 PPFIA2O75334 1257 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 SECISBP2LQ93073 1101 aaKnown RBP7.67□□□□□ -1.18
CLCN3-211ENST00000613795 IQCDQ96DY2 449 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 HELLSQ9NRZ9 838 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 SPTLC3Q9NUV7 552 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 PYCARDQ9ULZ3 195 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 EDC4Q6P2E9 1401 aaKnown RBP7.67□□□□□ -1.18
CLCN3-211ENST00000613795 BIRC2Q13490 618 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 NBPF6Q5VWK0 638 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 NBPF5PQ86XG9 351 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-211ENST00000613795 CCDC63Q8NA47 563 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 ARMC2Q8NEN0 867 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 LINS1Q8NG48 757 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 NBPF4Q96M43 638 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 NLRP3Q96P20 1036 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 C6orf50Q9HD87 102 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 MTUS1Q9ULD2 1270 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 UTP11Q9Y3A2 253 aaKnown RBP7.67□□□□□ -1.18
CLCN3-211ENST00000613795 PI4KAP2A4QPH2 592 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 ATP2B3Q16720 1220 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 LONRF2Q1L5Z9 754 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 MAP3K21Q5TCX8 1036 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 PI4KAP1Q8N8J0 262 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 MLKLQ8NB16 471 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 Q9H521 79 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 C6orf229H3BNL8 230 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 TSPY3P0CV98 308 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 TSPY8P0CW00 308 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 IL2RBP14784 551 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 TRPC3Q13507 836 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 RTN1Q16799 776 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 IFIT1BQ5T764 474 aaKnown RBP7.67□□□□□ -1.18
CLCN3-211ENST00000613795 USHBP1Q8N6Y0 703 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 TSC22D3Q99576 134 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 THUMPD2Q9BTF0 503 aaKnown RBP7.67□□□□□ -1.18
CLCN3-211ENST00000613795 DDX23Q9BUQ8 820 aaKnown RBP7.67□□□□□ -1.18
CLCN3-211ENST00000613795 BCAP29Q9UHQ4 241 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 ATP10AO60312 1499 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 GADD45BO75293 160 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-211ENST00000613795 SRGAP1Q7Z6B7 1085 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 ALG1Q9BT22 464 aa7.67□□□□□ -1.18
CLCN3-211ENST00000613795 ANTXR1Q9H6X2 564 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms