RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 PIK3R5Q8WYR1 880 aa7.78□□□□□ -1.16
CDKAL1-204ENST00000613575 EVI5LQ96CN4 794 aa7.78□□□□□ -1.16
CDKAL1-204ENST00000613575 CEP89Q96ST8 783 aa7.78□□□□□ -1.16
CDKAL1-204ENST00000613575 TMX1Q9H3N1 280 aa7.78□□□□□ -1.16
CDKAL1-204ENST00000613575 CPDO75976 1380 aa7.78□□□□□ -1.16
CDKAL1-204ENST00000613575 TMEM94Q12767 1356 aa7.78□□□□□ -1.16
CDKAL1-204ENST00000613575 TRPM3Q9HCF6 1732 aaPredicted RBP7.78□□□□□ -1.16
CDKAL1-204ENST00000613575 LTN1O94822 1766 aa7.78□□□□□ -1.16
CDKAL1-204ENST00000613575 ABCD1P33897 745 aa7.77□□□□□ -1.17
CDKAL1-204ENST00000613575 GCKRQ14397 625 aa7.77□□□□□ -1.17
CDKAL1-204ENST00000613575 CWF19L2Q2TBE0 894 aaKnown RBP7.77□□□□□ -1.17
CDKAL1-204ENST00000613575 RABL6Q3YEC7 729 aaPredicted RBP7.77□□□□□ -1.17
CDKAL1-204ENST00000613575 PNMA1Q8ND90 353 aa7.77□□□□□ -1.17
CDKAL1-204ENST00000613575 SUCLG2Q96I99 432 aa7.77□□□□□ -1.17
CDKAL1-204ENST00000613575 TRERF1Q96PN7 1200 aa7.77□□□□□ -1.17
CDKAL1-204ENST00000613575 UNC93B1Q9H1C4 597 aa7.77□□□□□ -1.17
CDKAL1-204ENST00000613575 COPRSQ9NQ92 184 aa7.77□□□□□ -1.17
CDKAL1-204ENST00000613575 CTNNA3Q9UI47 895 aa7.77□□□□□ -1.17
CDKAL1-204ENST00000613575 SNX14Q9Y5W7 946 aa7.77□□□□□ -1.17
CDKAL1-204ENST00000613575 SPATA31A3Q5VYP0 1347 aa7.77□□□□□ -1.17
CDKAL1-204ENST00000613575 NEURL1BA8MQ27 555 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 MYO1CO00159 1063 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 HIP1O00291 1037 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 CYP27B1O15528 508 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 KDM6AO15550 1401 aaPredicted RBP7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 RAD21O60216 631 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 G3BP1Q13283 466 aaKnown RBP eCLIP7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 NOLC1Q14978 699 aaKnown RBP eCLIP7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 NECTIN1Q15223 517 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 PLA2G2CQ5R387 149 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 TEX35Q5T0J7 233 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 MCTP1Q6DN14 999 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 COPS6Q7L5N1 327 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 EAF2Q96CJ1 260 aaPredicted RBP7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 GPATCH3Q96I76 525 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 ZNF496Q96IT1 587 aaPredicted RBP7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 NLRP2Q9NX02 1062 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 ETAA1Q9NY74 926 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 KIF1AQ12756 1690 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 CTIFO43310 598 aaKnown RBP7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 PRPF40AO75400 957 aaKnown RBP7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 IFIT2P09913 472 aaKnown RBP7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 RFX5P48382 616 aaPredicted RBP7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 CCT2P78371 535 aaKnown RBP7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 NEXNQ0ZGT2 675 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 TRAF1Q13077 416 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 SLC39A6Q13433 755 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 CDC37Q16543 378 aaPredicted RBP7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 TSGA10IPQ3SY00 556 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 AP1ARQ63HQ0 302 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 MAP4K1Q92918 833 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 GJD4Q96KN9 370 aaPredicted RBP7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 ALDH8A1Q9H2A2 487 aaPredicted RBP7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 BICC1Q9H694 974 aaKnown RBP7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 LIMCH1Q9UPQ0 1083 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 USP16Q9Y5T5 823 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 NDUFB9Q9Y6M9 179 aa7.76□□□□□ -1.17
CDKAL1-204ENST00000613575 SF3A1Q15459 793 aaKnown RBP7.75□□□□□ -1.17
CDKAL1-204ENST00000613575 VPS53Q5VIR6 699 aa7.75□□□□□ -1.17
CDKAL1-204ENST00000613575 C10orf67Q8IYJ2 551 aa7.75□□□□□ -1.17
CDKAL1-204ENST00000613575 ARMC2Q8NEN0 867 aa7.75□□□□□ -1.17
CDKAL1-204ENST00000613575 GPT2Q8TD30 523 aa7.75□□□□□ -1.17
CDKAL1-204ENST00000613575 XAGE3Q8WTP9 111 aa7.75□□□□□ -1.17
CDKAL1-204ENST00000613575 ZSCAN31Q96LW9 406 aaPredicted RBP7.75□□□□□ -1.17
CDKAL1-204ENST00000613575 FMNL2Q96PY5 1086 aa7.75□□□□□ -1.17
CDKAL1-204ENST00000613575 CEP126Q9P2H0 1117 aa7.75□□□□□ -1.17
CDKAL1-204ENST00000613575 PA2G4Q9UQ80 394 aaKnown RBP7.75□□□□□ -1.17
CDKAL1-204ENST00000613575 TUBGCP6Q96RT7 1819 aa7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 MBD3O95983 291 aa7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 SLC19A1P41440 591 aa7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 MAGEA8P43361 318 aa7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 CASP7P55210 303 aa7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 WWC2Q6AWC2 1192 aa7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 CWC27Q6UX04 472 aaKnown RBP7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 AACSQ86V21 672 aa7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 FMNL3Q8IVF7 1028 aa7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 TMEM87AQ8NBN3 555 aa7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 PLBD2Q8NHP8 589 aa7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 ZNF775Q96BV0 537 aaPredicted RBP7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 UPF3BQ9BZI7 483 aaKnown RBP7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 TMX4Q9H1E5 349 aaPredicted RBP7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 RANBP17Q9H2T7 1088 aaKnown RBP7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 GDPD2Q9HCC8 539 aa7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 FKBPLQ9UIM3 349 aa7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 TBC1D2BQ9UPU7 963 aa7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 RIPOR2Q9Y4F9 1068 aa7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 ALS2Q96Q42 1657 aa7.74□□□□□ -1.17
CDKAL1-204ENST00000613575 WDR33Q9C0J8 1336 aaKnown RBP7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 ERVV-2B6SEH9 535 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 H7C1W4 665 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 PPFIA2O75334 1257 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 MAP4K4O95819 1239 aaPredicted RBP7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 ATP5JP18859 108 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 ABL2P42684 1182 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 RBM5P52756 815 aaKnown RBP eCLIP7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 PTH1RQ03431 593 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 ADCY2Q08462 1091 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 AIMP1Q12904 312 aaKnown RBP7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 GPS2Q13227 327 aa7.73□□□□□ -1.17
CDKAL1-204ENST00000613575 ZSCAN23Q3MJ62 389 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms