RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 MYSM1Q5VVJ2 828 aa15.57■□□□□ 0.08
GGA3-220ENST00000613421 MLKLQ8NB16 471 aa15.57■□□□□ 0.08
GGA3-220ENST00000613421 CTNNBL1Q8WYA6 563 aaPredicted RBP15.57■□□□□ 0.08
GGA3-220ENST00000613421 IMPACTQ9P2X3 320 aa15.57■□□□□ 0.08
GGA3-220ENST00000613421 PLCD1P51178 756 aa15.57■□□□□ 0.08
GGA3-220ENST00000613421 LETM2Q2VYF4 491 aa15.57■□□□□ 0.08
GGA3-220ENST00000613421 TTC6Q86TZ1 520 aa15.57■□□□□ 0.08
GGA3-220ENST00000613421 SPDYE3A6NKU9 549 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 ADCK5Q3MIX3 580 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 TTC38Q5R3I4 469 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 MAATS1Q7Z4T9 603 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 TBC1D5Q92609 795 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 CHAMP1Q96JM3 812 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 CCT6AP40227 531 aaKnown RBP15.56■□□□□ 0.08
GGA3-220ENST00000613421 LRRC24Q50LG9 513 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 AKNAD1Q5T1N1 836 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 CNBD1Q8NA66 436 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 SAP30BPQ9UHR5 308 aaKnown RBP15.56■□□□□ 0.08
GGA3-220ENST00000613421 ADCY9O60503 1353 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 MACROD2A1Z1Q3 448 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 TUBB4BP68371 445 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 TRAPPC3LQ5T215 181 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 IGSF22Q8N9C0 903 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 TLR7Q9NYK1 1049 aaKnown RBP15.56■□□□□ 0.08
GGA3-220ENST00000613421 SLAIN2Q9P270 581 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 DBNLQ9UJU6 430 aaKnown RBP15.56■□□□□ 0.08
GGA3-220ENST00000613421 ADALQ6DHV7 355 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 NEK11Q8NG66 645 aa15.56■□□□□ 0.08
GGA3-220ENST00000613421 ZBTB38Q8NAP3 1195 aaPredicted RBP15.55■□□□□ 0.08
GGA3-220ENST00000613421 ERO1AQ96HE7 468 aa15.55■□□□□ 0.08
GGA3-220ENST00000613421 AATFQ9NY61 560 aaKnown RBP eCLIP15.55■□□□□ 0.08
GGA3-220ENST00000613421 PCCAP05165 728 aaPredicted RBP15.55■□□□□ 0.08
GGA3-220ENST00000613421 ZRSR2Q15696 482 aaKnown RBP15.55■□□□□ 0.08
GGA3-220ENST00000613421 KCNJ14Q9UNX9 436 aa15.55■□□□□ 0.08
GGA3-220ENST00000613421 GCOM1H8Y6P7 765 aaPredicted RBP15.55■□□□□ 0.08
GGA3-220ENST00000613421 RIMBP2O15034 1052 aa15.55■□□□□ 0.08
GGA3-220ENST00000613421 MYZAPP0CAP1 466 aa15.55■□□□□ 0.08
GGA3-220ENST00000613421 ZHX1Q9UKY1 873 aaPredicted RBP15.55■□□□□ 0.08
GGA3-220ENST00000613421 SYNRGQ9UMZ2 1314 aa15.55■□□□□ 0.08
GGA3-220ENST00000613421 RIOK3O14730 519 aaKnown RBP15.55■□□□□ 0.08
GGA3-220ENST00000613421 HSF2BPO75031 334 aa15.55■□□□□ 0.08
GGA3-220ENST00000613421 NR1I2O75469 434 aa15.55■□□□□ 0.08
GGA3-220ENST00000613421 CUL4AQ13619 759 aa15.55■□□□□ 0.08
GGA3-220ENST00000613421 USP28Q96RU2 1077 aa15.55■□□□□ 0.08
GGA3-220ENST00000613421 HDAC9Q9UKV0 1011 aa15.55■□□□□ 0.08
GGA3-220ENST00000613421 ABCA6Q8N139 1617 aa15.55■□□□□ 0.08
GGA3-220ENST00000613421 PPP1R2P41236 205 aa15.54■□□□□ 0.08
GGA3-220ENST00000613421 CCDC174Q6PII3 467 aa15.54■□□□□ 0.08
GGA3-220ENST00000613421 RBM17Q96I25 401 aaKnown RBP15.54■□□□□ 0.08
GGA3-220ENST00000613421 SCLT1Q96NL6 688 aa15.54■□□□□ 0.08
GGA3-220ENST00000613421 FSD2A1L4K1 749 aa15.54■□□□□ 0.08
GGA3-220ENST00000613421 SV2BQ7L1I2 683 aa15.54■□□□□ 0.08
GGA3-220ENST00000613421 PUF60Q9UHX1 559 aaKnown RBP15.54■□□□□ 0.08
GGA3-220ENST00000613421 UFL1O94874 794 aa15.54■□□□□ 0.08
GGA3-220ENST00000613421 KRT13P13646 458 aa15.54■□□□□ 0.08
GGA3-220ENST00000613421 POSTNQ15063 836 aa15.54■□□□□ 0.08
GGA3-220ENST00000613421 MYRIPQ8NFW9 859 aa15.54■□□□□ 0.08
GGA3-220ENST00000613421 CCNL1Q9UK58 526 aaPredicted RBP15.54■□□□□ 0.08
GGA3-220ENST00000613421 FBXO3Q9UK99 471 aa15.54■□□□□ 0.08
GGA3-220ENST00000613421 TSPOAP1O95153 1857 aa15.54■□□□□ 0.08
GGA3-220ENST00000613421 TERF1P54274 439 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 ARID5AQ03989 594 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 WDR66Q8TBY9 1149 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 QRICH2Q9H0J4 1663 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 TRIM14Q14142 442 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 MICALCLQ6ZW33 695 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 OGFOD1Q8N543 542 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 FAM107BQ9H098 131 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 NFE2L3Q9Y4A8 694 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 PRAMEF22A3QJZ6 481 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 MAP2K1Q02750 393 aaPredicted RBP15.53■□□□□ 0.08
GGA3-220ENST00000613421 TFCP2L1Q9NZI6 479 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 E9PCH4 1651 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 GOLGA6L10A0A0M3HER8 536 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 PDE6AP16499 860 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 EYA3Q99504 573 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 NAP1L4Q99733 375 aaKnown RBP15.53■□□□□ 0.08
GGA3-220ENST00000613421 SELENOOQ9BVL4 669 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 VPS16Q9H269 839 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 GPR108Q9NPR9 543 aa15.53■□□□□ 0.08
GGA3-220ENST00000613421 CAPZA3Q96KX2 299 aa15.52■□□□□ 0.08
GGA3-220ENST00000613421 FGAP02671 866 aa15.52■□□□□ 0.08
GGA3-220ENST00000613421 PPARAQ07869 468 aa15.52■□□□□ 0.08
GGA3-220ENST00000613421 FERMT2Q96AC1 680 aa15.52■□□□□ 0.08
GGA3-220ENST00000613421 LMTK3Q96Q04 1460 aa15.52■□□□□ 0.08
GGA3-220ENST00000613421 PDE4DQ08499 809 aa15.52■□□□□ 0.07
GGA3-220ENST00000613421 WDR78Q5VTH9 848 aa15.52■□□□□ 0.07
GGA3-220ENST00000613421 ADGRB3O60242 1522 aa15.52■□□□□ 0.07
GGA3-220ENST00000613421 PFKFB1P16118 471 aa15.52■□□□□ 0.07
GGA3-220ENST00000613421 POLA2Q14181 598 aa15.52■□□□□ 0.07
GGA3-220ENST00000613421 BICD1Q96G01 975 aa15.52■□□□□ 0.07
GGA3-220ENST00000613421 TRERF1Q96PN7 1200 aa15.52■□□□□ 0.07
GGA3-220ENST00000613421 KIAA1468Q9P260 1216 aa15.52■□□□□ 0.07
GGA3-220ENST00000613421 IFNL3Q8IZI9 196 aa15.51■□□□□ 0.07
GGA3-220ENST00000613421 ZNF654Q8IZM8 581 aa15.51■□□□□ 0.07
GGA3-220ENST00000613421 LRRIQ1Q96JM4 1722 aa15.51■□□□□ 0.07
GGA3-220ENST00000613421 A2ML1A8K2U0 1454 aa15.51■□□□□ 0.07
GGA3-220ENST00000613421 ZMYM6O95789 1325 aa15.51■□□□□ 0.07
GGA3-220ENST00000613421 MRPL12P52815 198 aaKnown RBP15.51■□□□□ 0.07
GGA3-220ENST00000613421 EVCP57679 992 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms