RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 MIGA1Q8NAN2 632 aa15.47■□□□□ 0.07
CSTF1-208ENST00000613138 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.47■□□□□ 0.07
CSTF1-208ENST00000613138 ATRNL1Q5VV63 1379 aa15.47■□□□□ 0.07
CSTF1-208ENST00000613138 RPAP1Q9BWH6 1393 aaPredicted RBP15.47■□□□□ 0.07
CSTF1-208ENST00000613138 GOLIM4O00461 696 aa15.46■□□□□ 0.07
CSTF1-208ENST00000613138 TRPA1O75762 1119 aa15.46■□□□□ 0.07
CSTF1-208ENST00000613138 CYP7A1P22680 504 aa15.46■□□□□ 0.07
CSTF1-208ENST00000613138 MAGEB6Q8N7X4 407 aa15.46■□□□□ 0.07
CSTF1-208ENST00000613138 WRNIP1Q96S55 665 aa15.46■□□□□ 0.07
CSTF1-208ENST00000613138 IDI2Q9BXS1 227 aa15.46■□□□□ 0.07
CSTF1-208ENST00000613138 R3HDMLQ9H3Y0 253 aa15.46■□□□□ 0.07
CSTF1-208ENST00000613138 RNF186Q9NXI6 227 aa15.46■□□□□ 0.07
CSTF1-208ENST00000613138 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.46■□□□□ 0.07
CSTF1-208ENST00000613138 SNCAIPQ9Y6H5 919 aa15.46■□□□□ 0.07
CSTF1-208ENST00000613138 ATAD5Q96QE3 1844 aa15.45■□□□□ 0.06
CSTF1-208ENST00000613138 GSTO1P78417 241 aa15.45■□□□□ 0.06
CSTF1-208ENST00000613138 MAP3K9P80192 1104 aa15.45■□□□□ 0.06
CSTF1-208ENST00000613138 SLC4A8Q2Y0W8 1093 aa15.45■□□□□ 0.06
CSTF1-208ENST00000613138 SLF2Q8IX21 1173 aa15.45■□□□□ 0.06
CSTF1-208ENST00000613138 TEX11Q8IYF3 940 aa15.45■□□□□ 0.06
CSTF1-208ENST00000613138 ANKRD13AQ8IZ07 590 aa15.45■□□□□ 0.06
CSTF1-208ENST00000613138 OPTNQ96CV9 577 aa15.45■□□□□ 0.06
CSTF1-208ENST00000613138 BEGAINQ9BUH8 593 aa15.45■□□□□ 0.06
CSTF1-208ENST00000613138 LDHCP07864 332 aa15.44■□□□□ 0.06
CSTF1-208ENST00000613138 MAPKAPK5Q8IW41 473 aa15.44■□□□□ 0.06
CSTF1-208ENST00000613138 ZSCAN29Q8IWY8 852 aaPredicted RBP15.44■□□□□ 0.06
CSTF1-208ENST00000613138 PHIPQ8WWQ0 1821 aa15.44■□□□□ 0.06
CSTF1-208ENST00000613138 BAZ2AQ9UIF9 1905 aaKnown RBP15.43■□□□□ 0.06
CSTF1-208ENST00000613138 ENTPD3O75355 529 aa15.43■□□□□ 0.06
CSTF1-208ENST00000613138 TBC1D8O95759 1140 aa15.43■□□□□ 0.06
CSTF1-208ENST00000613138 CCDC84Q86UT8 332 aaPredicted RBP15.43■□□□□ 0.06
CSTF1-208ENST00000613138 TGFBRAP1Q8WUH2 860 aa15.43■□□□□ 0.06
CSTF1-208ENST00000613138 OTUD5Q96G74 571 aa15.43■□□□□ 0.06
CSTF1-208ENST00000613138 DOCK1Q14185 1865 aa15.43■□□□□ 0.06
CSTF1-208ENST00000613138 NAV1Q8NEY1 1877 aa15.42■□□□□ 0.06
CSTF1-208ENST00000613138 IGF2BP3O00425 579 aaKnown RBP eCLIP15.42■□□□□ 0.06
CSTF1-208ENST00000613138 MAP4K4O95819 1239 aaPredicted RBP15.42■□□□□ 0.06
CSTF1-208ENST00000613138 PDE6AP16499 860 aa15.42■□□□□ 0.06
CSTF1-208ENST00000613138 ATP5JP18859 108 aa15.42■□□□□ 0.06
CSTF1-208ENST00000613138 EVX2Q03828 476 aa15.42■□□□□ 0.06
CSTF1-208ENST00000613138 RRP1BQ14684 758 aaKnown RBP15.42■□□□□ 0.06
CSTF1-208ENST00000613138 SHROOM1Q2M3G4 852 aaPredicted RBP15.42■□□□□ 0.06
CSTF1-208ENST00000613138 PTPN18Q99952 460 aa15.42■□□□□ 0.06
CSTF1-208ENST00000613138 ZNF341Q9BYN7 854 aa15.42■□□□□ 0.06
CSTF1-208ENST00000613138 OSBPL5Q9H0X9 879 aaPredicted RBP15.42■□□□□ 0.06
CSTF1-208ENST00000613138 SAP30BPQ9UHR5 308 aaKnown RBP15.42■□□□□ 0.06
CSTF1-208ENST00000613138 PTPRFP10586 1907 aa15.42■□□□□ 0.06
CSTF1-208ENST00000613138 DDX60LQ5H9U9 1706 aaKnown RBP15.41■□□□□ 0.06
CSTF1-208ENST00000613138 PHF20L1A8MW92 1017 aa15.41■□□□□ 0.06
CSTF1-208ENST00000613138 IGHDP01880 384 aa15.41■□□□□ 0.06
CSTF1-208ENST00000613138 TM4SF4P48230 202 aa15.41■□□□□ 0.06
CSTF1-208ENST00000613138 PPP4CP60510 307 aa15.41■□□□□ 0.06
CSTF1-208ENST00000613138 DCAF15Q66K64 600 aa15.41■□□□□ 0.06
CSTF1-208ENST00000613138 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.41■□□□□ 0.06
CSTF1-208ENST00000613138 HAUS7Q99871 368 aa15.41■□□□□ 0.06
CSTF1-208ENST00000613138 PAG1Q9NWQ8 432 aa15.41■□□□□ 0.06
CSTF1-208ENST00000613138 ZNF112Q9UJU3 913 aa15.41■□□□□ 0.06
CSTF1-208ENST00000613138 CSADQ9Y600 493 aa15.41■□□□□ 0.06
CSTF1-208ENST00000613138 FLT1P17948 1338 aa15.41■□□□□ 0.06
CSTF1-208ENST00000613138 ZNF532Q9HCE3 1301 aa15.41■□□□□ 0.06
CSTF1-208ENST00000613138 TCRBV5S4A2TA0A5A2 114 aa15.4■□□□□ 0.06
CSTF1-208ENST00000613138 SLC9C2Q5TAH2 1124 aa15.4■□□□□ 0.06
CSTF1-208ENST00000613138 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
CSTF1-208ENST00000613138 MS4A4AQ96JQ5 239 aa15.4■□□□□ 0.06
CSTF1-208ENST00000613138 PRDM10Q9NQV6 1147 aa15.4■□□□□ 0.06
CSTF1-208ENST00000613138 PALD1Q9ULE6 856 aa15.4■□□□□ 0.06
CSTF1-208ENST00000613138 ZSWIM8A7E2V4 1837 aa15.39■□□□□ 0.05
CSTF1-208ENST00000613138 SPDYE5A6NIY4 337 aa15.39■□□□□ 0.05
CSTF1-208ENST00000613138 IRF6O14896 467 aa15.39■□□□□ 0.05
CSTF1-208ENST00000613138 CA12O43570 354 aa15.39■□□□□ 0.05
CSTF1-208ENST00000613138 ZBTB48P10074 688 aaPredicted RBP15.39■□□□□ 0.05
CSTF1-208ENST00000613138 MAP3K12Q12852 859 aa15.39■□□□□ 0.05
CSTF1-208ENST00000613138 IFNL1Q8IU54 200 aa15.39■□□□□ 0.05
CSTF1-208ENST00000613138 TNS4Q8IZW8 715 aa15.39■□□□□ 0.05
CSTF1-208ENST00000613138 BRI3BPQ8WY22 251 aa15.39■□□□□ 0.05
CSTF1-208ENST00000613138 RIOK1Q9BRS2 568 aaKnown RBP15.39■□□□□ 0.05
CSTF1-208ENST00000613138 NOL10Q9BSC4 688 aaKnown RBP15.39■□□□□ 0.05
CSTF1-208ENST00000613138 DNAJC18Q9H819 358 aa15.39■□□□□ 0.05
CSTF1-208ENST00000613138 BAG3O95817 575 aa15.38■□□□□ 0.05
CSTF1-208ENST00000613138 JAG1P78504 1218 aa15.38■□□□□ 0.05
CSTF1-208ENST00000613138 ANKRD45Q5TZF3 282 aa15.38■□□□□ 0.05
CSTF1-208ENST00000613138 LCORLQ8N3X6 602 aa15.38■□□□□ 0.05
CSTF1-208ENST00000613138 ECHDC1Q9NTX5 307 aa15.38■□□□□ 0.05
CSTF1-208ENST00000613138 CCL15-CCL14A0A0B4J2E2 113 aa15.37■□□□□ 0.05
CSTF1-208ENST00000613138 MANSC4A6NHS7 340 aaPredicted RBP15.37■□□□□ 0.05
CSTF1-208ENST00000613138 SMIM22K7EJ46 135 aa15.37■□□□□ 0.05
CSTF1-208ENST00000613138 PRKAB2O43741 272 aa15.37■□□□□ 0.05
CSTF1-208ENST00000613138 ADD2P35612 726 aa15.37■□□□□ 0.05
CSTF1-208ENST00000613138 MAP3K10Q02779 954 aa15.37■□□□□ 0.05
CSTF1-208ENST00000613138 SREBF2Q12772 1141 aa15.37■□□□□ 0.05
CSTF1-208ENST00000613138 HDAC1Q13547 482 aaPredicted RBP15.37■□□□□ 0.05
CSTF1-208ENST00000613138 TTF1Q15361 905 aaPredicted RBP15.37■□□□□ 0.05
CSTF1-208ENST00000613138 CCL15Q16663 113 aa15.37■□□□□ 0.05
CSTF1-208ENST00000613138 B4GALNT3Q6L9W6 998 aa15.37■□□□□ 0.05
CSTF1-208ENST00000613138 ERO1BQ86YB8 467 aa15.37■□□□□ 0.05
CSTF1-208ENST00000613138 FAM43AQ8N2R8 423 aa15.37■□□□□ 0.05
CSTF1-208ENST00000613138 ARMT1Q9H993 441 aa15.37■□□□□ 0.05
CSTF1-208ENST00000613138 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.37■□□□□ 0.05
CSTF1-208ENST00000613138 SAGE1Q9NXZ1 904 aa15.37■□□□□ 0.05
CSTF1-208ENST00000613138 COL2A1P02458 1487 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms