RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 FAM198AQ9UFP1 575 aa13.75□□□□□ -0.21
CCL3L3-201ENST00000612839 MKRN1Q9UHC7 482 aaKnown RBP13.75□□□□□ -0.21
CCL3L3-201ENST00000612839 FOCADQ5VW36 1801 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 CYP7A1P22680 504 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 NF2P35240 595 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 FKBP1BP68106 108 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 TCP10Q12799 353 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 SLC9C2Q5TAH2 1124 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 MOB2Q70IA6 237 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 AATFQ9NY61 560 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 FZD1Q9UP38 647 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 RPAP1Q9BWH6 1393 aaPredicted RBP13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 ERC2O15083 957 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 GLRX3O76003 335 aaKnown RBP13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 HUNKP57058 714 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 PPP4CP60510 307 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 DEFB115Q30KQ5 88 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 SUPT20HL1Q3ZLR7 823 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 TMED8Q6PL24 325 aaPredicted RBP13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 ZFPM1Q8IX07 1006 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 SH3RF3Q8TEJ3 882 aaPredicted RBP13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 FAM151AQ8WW52 585 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 KLRG1Q96E93 195 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 HHIPL1Q96JK4 782 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 DDX4Q9NQI0 724 aaKnown RBP13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 STAP2Q9UGK3 403 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 AK9Q5TCS8 1911 aa13.74□□□□□ -0.21
CCL3L3-201ENST00000612839 PCNTO95613 3336 aa13.73□□□□□ -0.21
CCL3L3-201ENST00000612839 TCRBV5S4A2TA0A5A2 114 aa13.73□□□□□ -0.21
CCL3L3-201ENST00000612839 MAP3K13O43283 966 aa13.73□□□□□ -0.21
CCL3L3-201ENST00000612839 BAG3O95817 575 aa13.73□□□□□ -0.21
CCL3L3-201ENST00000612839 MAP4K4O95819 1239 aaPredicted RBP13.73□□□□□ -0.21
CCL3L3-201ENST00000612839 PDE6AP16499 860 aa13.73□□□□□ -0.21
CCL3L3-201ENST00000612839 RGS3P49796 1198 aa13.73□□□□□ -0.21
CCL3L3-201ENST00000612839 PDE1AP54750 535 aa13.73□□□□□ -0.21
CCL3L3-201ENST00000612839 PRKG1Q13976 671 aa13.73□□□□□ -0.21
CCL3L3-201ENST00000612839 MIGA1Q8NAN2 632 aa13.73□□□□□ -0.21
CCL3L3-201ENST00000612839 NOL10Q9BSC4 688 aaKnown RBP13.73□□□□□ -0.21
CCL3L3-201ENST00000612839 ZNF532Q9HCE3 1301 aa13.72□□□□□ -0.21
CCL3L3-201ENST00000612839 UBE2Q2LH0YL09 131 aa13.72□□□□□ -0.21
CCL3L3-201ENST00000612839 ENTPD3O75355 529 aa13.72□□□□□ -0.21
CCL3L3-201ENST00000612839 CHGBP05060 677 aa13.72□□□□□ -0.21
CCL3L3-201ENST00000612839 ADD2P35612 726 aa13.72□□□□□ -0.21
CCL3L3-201ENST00000612839 DYNLL1P63167 89 aaKnown RBP13.72□□□□□ -0.21
CCL3L3-201ENST00000612839 PICALMQ13492 652 aa13.72□□□□□ -0.21
CCL3L3-201ENST00000612839 SLFNL1Q499Z3 407 aa13.72□□□□□ -0.21
CCL3L3-201ENST00000612839 PLCD3Q8N3E9 789 aa13.72□□□□□ -0.21
CCL3L3-201ENST00000612839 BMP2KQ9NSY1 1161 aaPredicted RBP13.72□□□□□ -0.21
CCL3L3-201ENST00000612839 ANGEL1Q9UNK9 670 aaKnown RBP13.72□□□□□ -0.21
CCL3L3-201ENST00000612839 OTOFQ9HC10 1997 aa13.72□□□□□ -0.21
CCL3L3-201ENST00000612839 PPP1R12BO60237 982 aaPredicted RBP13.71□□□□□ -0.21
CCL3L3-201ENST00000612839 USP2O75604 605 aaPredicted RBP13.71□□□□□ -0.21
CCL3L3-201ENST00000612839 PLCG2P16885 1265 aa13.71□□□□□ -0.21
CCL3L3-201ENST00000612839 VEGFBP49765 207 aa13.71□□□□□ -0.21
CCL3L3-201ENST00000612839 TTLL12Q14166 644 aaPredicted RBP13.71□□□□□ -0.21
CCL3L3-201ENST00000612839 MAP3K11Q16584 847 aa13.71□□□□□ -0.21
CCL3L3-201ENST00000612839 CYP4F22Q6NT55 531 aa13.71□□□□□ -0.21
CCL3L3-201ENST00000612839 SH3BP5LQ7L8J4 393 aa13.71□□□□□ -0.21
CCL3L3-201ENST00000612839 TEX11Q8IYF3 940 aa13.71□□□□□ -0.21
CCL3L3-201ENST00000612839 KBTBD3Q8NAB2 608 aa13.71□□□□□ -0.21
CCL3L3-201ENST00000612839 RIOK1Q9BRS2 568 aaKnown RBP13.71□□□□□ -0.21
CCL3L3-201ENST00000612839 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.71□□□□□ -0.21
CCL3L3-201ENST00000612839 LDLRAD1Q5T700 205 aa13.7□□□□□ -0.22
CCL3L3-201ENST00000612839 RGMBQ6NW40 437 aa13.7□□□□□ -0.22
CCL3L3-201ENST00000612839 MAMSTRQ6ZN01 415 aa13.7□□□□□ -0.22
CCL3L3-201ENST00000612839 ARMC9Q7Z3E5 817 aa13.7□□□□□ -0.22
CCL3L3-201ENST00000612839 PLEKHM2Q8IWE5 1019 aa13.7□□□□□ -0.22
CCL3L3-201ENST00000612839 TRPC6Q9Y210 931 aa13.7□□□□□ -0.22
CCL3L3-201ENST00000612839 THSD7BQ9C0I4 1608 aa13.69□□□□□ -0.22
CCL3L3-201ENST00000612839 DDTLA6NHG4 134 aaPredicted RBP13.69□□□□□ -0.22
CCL3L3-201ENST00000612839 UBE3CQ15386 1083 aa13.69□□□□□ -0.22
CCL3L3-201ENST00000612839 PAXIP1Q6ZW49 1069 aaPredicted RBP13.69□□□□□ -0.22
CCL3L3-201ENST00000612839 CERS3Q8IU89 383 aa13.69□□□□□ -0.22
CCL3L3-201ENST00000612839 TGFBRAP1Q8WUH2 860 aa13.69□□□□□ -0.22
CCL3L3-201ENST00000612839 CAPNS2Q96L46 248 aa13.69□□□□□ -0.22
CCL3L3-201ENST00000612839 OSBPL5Q9H0X9 879 aaPredicted RBP13.69□□□□□ -0.22
CCL3L3-201ENST00000612839 OSBPL3Q9H4L5 887 aa13.69□□□□□ -0.22
CCL3L3-201ENST00000612839 PLSCR2Q9NRY7 297 aa13.69□□□□□ -0.22
CCL3L3-201ENST00000612839 WDR33Q9C0J8 1336 aaKnown RBP13.69□□□□□ -0.22
CCL3L3-201ENST00000612839 ATRNL1Q5VV63 1379 aa13.69□□□□□ -0.22
CCL3L3-201ENST00000612839 COL2A1P02458 1487 aaPredicted RBP13.69□□□□□ -0.22
CCL3L3-201ENST00000612839 MAGEB6P1A0A0J9YX57 407 aa13.68□□□□□ -0.22
CCL3L3-201ENST00000612839 FAM155AB1AL88 458 aaPredicted RBP13.68□□□□□ -0.22
CCL3L3-201ENST00000612839 PDE4AP27815 886 aa13.68□□□□□ -0.22
CCL3L3-201ENST00000612839 TIE1P35590 1138 aa13.68□□□□□ -0.22
CCL3L3-201ENST00000612839 ECE1P42892 770 aa13.68□□□□□ -0.22
CCL3L3-201ENST00000612839 ZNF157P51786 506 aaPredicted RBP13.68□□□□□ -0.22
CCL3L3-201ENST00000612839 GRM1Q13255 1194 aa13.68□□□□□ -0.22
CCL3L3-201ENST00000612839 MIGA2Q7L4E1 593 aa13.68□□□□□ -0.22
CCL3L3-201ENST00000612839 ZSCAN29Q8IWY8 852 aaPredicted RBP13.68□□□□□ -0.22
CCL3L3-201ENST00000612839 JMYQ8N9B5 988 aa13.68□□□□□ -0.22
CCL3L3-201ENST00000612839 CSRNP1Q96S65 589 aa13.68□□□□□ -0.22
CCL3L3-201ENST00000612839 FLT1P17948 1338 aa13.68□□□□□ -0.22
CCL3L3-201ENST00000612839 SIPA1L1O43166 1804 aa13.68□□□□□ -0.22
CCL3L3-201ENST00000612839 MYH1P12882 1939 aa13.68□□□□□ -0.22
CCL3L3-201ENST00000612839 NEFLP07196 543 aa13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 IREB2P48200 963 aaKnown RBP13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 ZSCAN25Q6NSZ9 544 aa13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 MAPKAPK5Q8IW41 473 aa13.67□□□□□ -0.22
CCL3L3-201ENST00000612839 LCORLQ8N3X6 602 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms