RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ZSCAN25Q6NSZ9 544 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 IFNLR1Q8IU57 520 aaPredicted RBP10.62□□□□□ -0.71
SMAD4-217ENST00000611848 KBTBD3Q8NAB2 608 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 HOOK2Q96ED9 719 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 HHIPL1Q96JK4 782 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 TEPSINQ96N21 525 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 C22orf23Q9BZE7 217 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 TMEM39BQ9GZU3 492 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 OSBPL3Q9H4L5 887 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 CNTNAP1P78357 1384 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 RASSF10A6NK89 507 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 WDHD1O75717 1129 aaPredicted RBP10.62□□□□□ -0.71
SMAD4-217ENST00000611848 ADD2P35612 726 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 HTRA3P83110 453 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 MKRN4PQ13434 485 aaPredicted RBP10.62□□□□□ -0.71
SMAD4-217ENST00000611848 UBE3CQ15386 1083 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 NBPF12Q5TAG4 269 aaPredicted RBP10.62□□□□□ -0.71
SMAD4-217ENST00000611848 ARMC9Q7Z3E5 817 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 ADGRA1Q86SQ6 560 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 SAPCD2Q86UD0 394 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 PLEKHM2Q8IWE5 1019 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 TEX11Q8IYF3 940 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 FAM198AQ9UFP1 575 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 RFX7Q2KHR2 1363 aa10.62□□□□□ -0.71
SMAD4-217ENST00000611848 TCRBV5S4A2TA0A5A2 114 aa10.61□□□□□ -0.71
SMAD4-217ENST00000611848 ZFYP08048 801 aaPredicted RBP10.61□□□□□ -0.71
SMAD4-217ENST00000611848 RBM25P49756 843 aaKnown RBP10.61□□□□□ -0.71
SMAD4-217ENST00000611848 MFAP1P55081 439 aaKnown RBP10.61□□□□□ -0.71
SMAD4-217ENST00000611848 HUNKP57058 714 aa10.61□□□□□ -0.71
SMAD4-217ENST00000611848 TCP10Q12799 353 aa10.61□□□□□ -0.71
SMAD4-217ENST00000611848 TTLL12Q14166 644 aaPredicted RBP10.61□□□□□ -0.71
SMAD4-217ENST00000611848 DEFB115Q30KQ5 88 aa10.61□□□□□ -0.71
SMAD4-217ENST00000611848 SH3RF3Q8TEJ3 882 aaPredicted RBP10.61□□□□□ -0.71
SMAD4-217ENST00000611848 ZNF532Q9HCE3 1301 aa10.61□□□□□ -0.71
SMAD4-217ENST00000611848 CDK5RAP2Q96SN8 1893 aa10.61□□□□□ -0.71
SMAD4-217ENST00000611848 FOCADQ5VW36 1801 aa10.6□□□□□ -0.71
SMAD4-217ENST00000611848 UNCXA6NJT0 531 aa10.6□□□□□ -0.71
SMAD4-217ENST00000611848 DYNLL1P63167 89 aaKnown RBP10.6□□□□□ -0.71
SMAD4-217ENST00000611848 PICALMQ13492 652 aa10.6□□□□□ -0.71
SMAD4-217ENST00000611848 MAP3K11Q16584 847 aa10.6□□□□□ -0.71
SMAD4-217ENST00000611848 TICAM2Q86XR7 235 aa10.6□□□□□ -0.71
SMAD4-217ENST00000611848 MIGA1Q8NAN2 632 aa10.6□□□□□ -0.71
SMAD4-217ENST00000611848 DDX4Q9NQI0 724 aaKnown RBP10.6□□□□□ -0.71
SMAD4-217ENST00000611848 MAGEB6P1A0A0J9YX57 407 aa10.59□□□□□ -0.71
SMAD4-217ENST00000611848 GSPT1P15170 499 aaKnown RBP10.59□□□□□ -0.71
SMAD4-217ENST00000611848 ECE1P42892 770 aa10.59□□□□□ -0.71
SMAD4-217ENST00000611848 IREB2P48200 963 aaKnown RBP10.59□□□□□ -0.71
SMAD4-217ENST00000611848 DCAF15Q66K64 600 aa10.59□□□□□ -0.71
SMAD4-217ENST00000611848 ZFPM1Q8IX07 1006 aa10.59□□□□□ -0.71
SMAD4-217ENST00000611848 DNAJC5GQ8N7S2 189 aa10.59□□□□□ -0.71
SMAD4-217ENST00000611848 EVI5LQ96CN4 794 aa10.59□□□□□ -0.71
SMAD4-217ENST00000611848 KLRG1Q96E93 195 aa10.59□□□□□ -0.71
SMAD4-217ENST00000611848 RIOK1Q9BRS2 568 aaKnown RBP10.59□□□□□ -0.71
SMAD4-217ENST00000611848 FSD1Q9BTV5 496 aa10.59□□□□□ -0.71
SMAD4-217ENST00000611848 TBC1D2Q9BYX2 928 aa10.59□□□□□ -0.71
SMAD4-217ENST00000611848 OSBPL5Q9H0X9 879 aaPredicted RBP10.59□□□□□ -0.71
SMAD4-217ENST00000611848 ANGEL1Q9UNK9 670 aaKnown RBP10.59□□□□□ -0.71
SMAD4-217ENST00000611848 SSC5DA1L4H1 1573 aa10.59□□□□□ -0.71
SMAD4-217ENST00000611848 MYH1P12882 1939 aa10.59□□□□□ -0.71
SMAD4-217ENST00000611848 ATRNL1Q5VV63 1379 aa10.59□□□□□ -0.71
SMAD4-217ENST00000611848 RNF113AO15541 343 aaKnown RBP10.58□□□□□ -0.72
SMAD4-217ENST00000611848 EIF5BO60841 1220 aaKnown RBP10.58□□□□□ -0.72
SMAD4-217ENST00000611848 USP2O75604 605 aaPredicted RBP10.58□□□□□ -0.72
SMAD4-217ENST00000611848 PRKG1Q13976 671 aa10.58□□□□□ -0.72
SMAD4-217ENST00000611848 TTC22Q5TAA0 569 aa10.58□□□□□ -0.72
SMAD4-217ENST00000611848 RGMBQ6NW40 437 aa10.58□□□□□ -0.72
SMAD4-217ENST00000611848 CDAN1Q8IWY9 1227 aa10.58□□□□□ -0.72
SMAD4-217ENST00000611848 TGFBRAP1Q8WUH2 860 aa10.58□□□□□ -0.72
SMAD4-217ENST00000611848 DHX36Q9H2U1 1008 aaKnown RBP10.58□□□□□ -0.72
SMAD4-217ENST00000611848 MKRN1Q9UHC7 482 aaKnown RBP10.58□□□□□ -0.72
SMAD4-217ENST00000611848 COL2A1P02458 1487 aaPredicted RBP10.58□□□□□ -0.72
SMAD4-217ENST00000611848 UBE2Q2LH0YL09 131 aa10.58□□□□□ -0.72
SMAD4-217ENST00000611848 CDC45O75419 566 aa10.58□□□□□ -0.72
SMAD4-217ENST00000611848 USP5P45974 858 aa10.58□□□□□ -0.72
SMAD4-217ENST00000611848 LDLRAD1Q5T700 205 aa10.58□□□□□ -0.72
SMAD4-217ENST00000611848 PAXIP1Q6ZW49 1069 aaPredicted RBP10.58□□□□□ -0.72
SMAD4-217ENST00000611848 MOB2Q70IA6 237 aa10.58□□□□□ -0.72
SMAD4-217ENST00000611848 MAPKAPK5Q8IW41 473 aa10.58□□□□□ -0.72
SMAD4-217ENST00000611848 ZSCAN29Q8IWY8 852 aaPredicted RBP10.58□□□□□ -0.72
SMAD4-217ENST00000611848 APPBP2Q92624 585 aa10.58□□□□□ -0.72
SMAD4-217ENST00000611848 CCDC102AQ96A19 550 aa10.58□□□□□ -0.72
SMAD4-217ENST00000611848 AIDAQ96BJ3 306 aa10.58□□□□□ -0.72
SMAD4-217ENST00000611848 CSRNP1Q96S65 589 aa10.58□□□□□ -0.72
SMAD4-217ENST00000611848 CRNKL1Q9BZJ0 848 aaKnown RBP10.58□□□□□ -0.72
SMAD4-217ENST00000611848 FLT1P17948 1338 aa10.57□□□□□ -0.72
SMAD4-217ENST00000611848 DDTLA6NHG4 134 aaPredicted RBP10.57□□□□□ -0.72
SMAD4-217ENST00000611848 TRIM6-TRIM34B2RNG4 842 aa10.57□□□□□ -0.72
SMAD4-217ENST00000611848 ZNF157P51786 506 aaPredicted RBP10.57□□□□□ -0.72
SMAD4-217ENST00000611848 MAP3K10Q02779 954 aa10.57□□□□□ -0.72
SMAD4-217ENST00000611848 NFKBIBQ15653 356 aa10.57□□□□□ -0.72
SMAD4-217ENST00000611848 SH3BP5LQ7L8J4 393 aa10.57□□□□□ -0.72
SMAD4-217ENST00000611848 ANKRD13AQ8IZ07 590 aa10.57□□□□□ -0.72
SMAD4-217ENST00000611848 CAPNS2Q96L46 248 aa10.57□□□□□ -0.72
SMAD4-217ENST00000611848 ZNF341Q9BYN7 854 aa10.57□□□□□ -0.72
SMAD4-217ENST00000611848 PUS7LQ9H0K6 701 aaKnown RBP10.57□□□□□ -0.72
SMAD4-217ENST00000611848 WDR33Q9C0J8 1336 aaKnown RBP10.56□□□□□ -0.72
SMAD4-217ENST00000611848 TBC1D12O60347 775 aa10.56□□□□□ -0.72
SMAD4-217ENST00000611848 MBD4O95243 580 aa10.56□□□□□ -0.72
SMAD4-217ENST00000611848 CHGBP05060 677 aa10.56□□□□□ -0.72
SMAD4-217ENST00000611848 VEGFBP49765 207 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 321.8 ms