RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 TMOD2Q9NZR1 351 aa14.07□□□□□ -0.16
CDH1-212ENST00000611625 GOLGA6L7A0A1B0GV03 622 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 FGAP02671 866 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 CAPN2P17655 700 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 CMA1P23946 247 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 VPS16Q9H269 839 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 C6orf50Q9HD87 102 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 ZNF215Q9UL58 517 aaPredicted RBP14.06□□□□□ -0.16
CDH1-212ENST00000611625 ALKQ9UM73 1620 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 ADD1P35611 737 aaKnown RBP14.06□□□□□ -0.16
CDH1-212ENST00000611625 MTX1Q13505 466 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 FBXO18Q8NFZ0 1043 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 SETDB2Q96T68 719 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 IVLP07476 585 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 ZMYM1Q5SVZ6 1142 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 KLHL34Q8N239 644 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 CAPZA3Q96KX2 299 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 SPAG5Q96R06 1193 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 NDUFA8P51970 172 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 DDB1Q16531 1140 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 TRMT44Q8IYL2 757 aaKnown RBP14.06□□□□□ -0.16
CDH1-212ENST00000611625 CUL5Q93034 780 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 ZFP91Q96JP5 570 aaPredicted RBP14.06□□□□□ -0.16
CDH1-212ENST00000611625 PDLIM2Q96JY6 352 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 PLIN2Q99541 437 aa14.06□□□□□ -0.16
CDH1-212ENST00000611625 A2ML1A8K2U0 1454 aa14.05□□□□□ -0.16
CDH1-212ENST00000611625 A0A1W2PQ27 194 aa14.05□□□□□ -0.16
CDH1-212ENST00000611625 A0A1W2PQ64 194 aa14.05□□□□□ -0.16
CDH1-212ENST00000611625 A0A1W2PQD8 194 aa14.05□□□□□ -0.16
CDH1-212ENST00000611625 PRDM1O75626 825 aa14.05□□□□□ -0.16
CDH1-212ENST00000611625 VPS18Q9P253 973 aa14.05□□□□□ -0.16
CDH1-212ENST00000611625 LMTK2Q8IWU2 1503 aa14.05□□□□□ -0.16
CDH1-212ENST00000611625 CEP152O94986 1710 aa14.05□□□□□ -0.16
CDH1-212ENST00000611625 HSF2BPO75031 334 aa14.05□□□□□ -0.16
CDH1-212ENST00000611625 PHACTR2O75167 634 aa14.05□□□□□ -0.16
CDH1-212ENST00000611625 TTC38Q5R3I4 469 aa14.05□□□□□ -0.16
CDH1-212ENST00000611625 AKNAD1Q5T1N1 836 aa14.05□□□□□ -0.16
CDH1-212ENST00000611625 MAATS1Q7Z4T9 603 aa14.05□□□□□ -0.16
CDH1-212ENST00000611625 SPATA5Q8NB90 893 aa14.05□□□□□ -0.16
CDH1-212ENST00000611625 RTEL1Q9NZ71 1219 aa14.05□□□□□ -0.16
CDH1-212ENST00000611625 BCCIPQ9P287 314 aaKnown RBP eCLIP14.05□□□□□ -0.16
CDH1-212ENST00000611625 TTF2Q9UNY4 1162 aaKnown RBP14.05□□□□□ -0.16
CDH1-212ENST00000611625 CYP2E1P05181 493 aaPredicted RBP14.04□□□□□ -0.16
CDH1-212ENST00000611625 TMEM132AQ24JP5 1023 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 CCDC122Q5T0U0 273 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 ZBTB9Q96C00 473 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 IQGAP1P46940 1657 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 NEFHP12036 1026 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 CHMP4BP1P59074 171 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 TRIM14Q14142 442 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 SPECC1LQ69YQ0 1117 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 PIK3AP1Q6ZUJ8 805 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 DENND2AQ9ULE3 1009 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 ERVV-2B6SEH9 535 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 RBM6P78332 1123 aaKnown RBP14.04□□□□□ -0.16
CDH1-212ENST00000611625 PPP2R5BQ15173 497 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 PARP10Q53GL7 1025 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 MICALCLQ6ZW33 695 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 HDXQ7Z353 690 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 DDX17Q92841 729 aaKnown RBP14.04□□□□□ -0.16
CDH1-212ENST00000611625 GPR108Q9NPR9 543 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 RCOR1Q9UKL0 485 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 CLIC4Q9Y696 253 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 CACTINQ8WUQ7 758 aaKnown RBP14.04□□□□□ -0.16
CDH1-212ENST00000611625 NAPGQ99747 312 aaPredicted RBP14.04□□□□□ -0.16
CDH1-212ENST00000611625 SERTAD1Q9UHV2 236 aa14.04□□□□□ -0.16
CDH1-212ENST00000611625 HLA-DOAP06340 250 aa14.03□□□□□ -0.16
CDH1-212ENST00000611625 C11orf57Q6ZUT1 292 aaPredicted RBP14.03□□□□□ -0.16
CDH1-212ENST00000611625 CCDC113Q9H0I3 377 aa14.03□□□□□ -0.16
CDH1-212ENST00000611625 ZMYM6O95789 1325 aa14.03□□□□□ -0.16
CDH1-212ENST00000611625 GNA11P29992 359 aa14.03□□□□□ -0.16
CDH1-212ENST00000611625 KRT79Q5XKE5 535 aa14.03□□□□□ -0.16
CDH1-212ENST00000611625 RSPH14Q9UHP6 348 aa14.03□□□□□ -0.16
CDH1-212ENST00000611625 WDHD1O75717 1129 aaPredicted RBP14.03□□□□□ -0.16
CDH1-212ENST00000611625 CDC25BP30305 580 aa14.03□□□□□ -0.16
CDH1-212ENST00000611625 TNIP1Q15025 636 aa14.03□□□□□ -0.16
CDH1-212ENST00000611625 IFI16Q16666 785 aaKnown RBP14.03□□□□□ -0.16
CDH1-212ENST00000611625 RNF187Q5TA31 235 aaPredicted RBP14.03□□□□□ -0.16
CDH1-212ENST00000611625 NOSTRINQ8IVI9 506 aa14.03□□□□□ -0.16
CDH1-212ENST00000611625 FTOQ9C0B1 505 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDH1-212ENST00000611625 MAPK8IP1Q9UQF2 711 aa14.03□□□□□ -0.16
CDH1-212ENST00000611625 MAST3O60307 1309 aa14.03□□□□□ -0.16
CDH1-212ENST00000611625 PDE6AP16499 860 aa14.03□□□□□ -0.16
CDH1-212ENST00000611625 ETF1P62495 437 aaKnown RBP14.03□□□□□ -0.16
CDH1-212ENST00000611625 RESTQ13127 1097 aa14.03□□□□□ -0.16
CDH1-212ENST00000611625 PRPF4BQ13523 1007 aaKnown RBP14.03□□□□□ -0.16
CDH1-212ENST00000611625 RRP36Q96EU6 259 aaKnown RBP14.03□□□□□ -0.16
CDH1-212ENST00000611625 GOPCQ9HD26 462 aa14.03□□□□□ -0.16
CDH1-212ENST00000611625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDH1-212ENST00000611625 MROH5Q6ZUA9 1318 aa14.03□□□□□ -0.16
CDH1-212ENST00000611625 CARMIL3Q8ND23 1372 aa14.02□□□□□ -0.16
CDH1-212ENST00000611625 RFC4P35249 363 aa14.02□□□□□ -0.16
CDH1-212ENST00000611625 PTPN12Q05209 780 aaKnown RBP14.02□□□□□ -0.16
CDH1-212ENST00000611625 PAK1Q13153 545 aa14.02□□□□□ -0.16
CDH1-212ENST00000611625 TTC14Q96N46 770 aa14.02□□□□□ -0.16
CDH1-212ENST00000611625 FBXO3Q9UK99 471 aa14.02□□□□□ -0.16
CDH1-212ENST00000611625 TUBB2AQ13885 445 aa14.02□□□□□ -0.16
CDH1-212ENST00000611625 SEPT7Q16181 437 aaKnown RBP14.02□□□□□ -0.16
CDH1-212ENST00000611625 ERCC6LQ2NKX8 1250 aa14.02□□□□□ -0.16
CDH1-212ENST00000611625 CYP26C1Q6V0L0 522 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms