RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 UQCRFS1P1P0C7P4 283 aa10.62□□□□□ -0.71
SNCA-212ENST00000611107 IREB2P48200 963 aaKnown RBP10.62□□□□□ -0.71
SNCA-212ENST00000611107 MAP3K9P80192 1104 aa10.62□□□□□ -0.71
SNCA-212ENST00000611107 EVX2Q03828 476 aa10.62□□□□□ -0.71
SNCA-212ENST00000611107 PICALMQ13492 652 aa10.62□□□□□ -0.71
SNCA-212ENST00000611107 AAMPQ13685 434 aa10.62□□□□□ -0.71
SNCA-212ENST00000611107 SHROOM1Q2M3G4 852 aaPredicted RBP10.62□□□□□ -0.71
SNCA-212ENST00000611107 ANKRD13AQ8IZ07 590 aa10.62□□□□□ -0.71
SNCA-212ENST00000611107 BRI3BPQ8WY22 251 aa10.62□□□□□ -0.71
SNCA-212ENST00000611107 ZNF512BQ96KM6 892 aaPredicted RBP10.62□□□□□ -0.71
SNCA-212ENST00000611107 WRNIP1Q96S55 665 aa10.62□□□□□ -0.71
SNCA-212ENST00000611107 BEGAINQ9BUH8 593 aa10.62□□□□□ -0.71
SNCA-212ENST00000611107 RAI14Q9P0K7 980 aa10.62□□□□□ -0.71
SNCA-212ENST00000611107 ZNF112Q9UJU3 913 aa10.62□□□□□ -0.71
SNCA-212ENST00000611107 ATAD5Q96QE3 1844 aa10.62□□□□□ -0.71
SNCA-212ENST00000611107 MYH1P12882 1939 aa10.62□□□□□ -0.71
SNCA-212ENST00000611107 MYH8P13535 1937 aa10.62□□□□□ -0.71
SNCA-212ENST00000611107 NAV1Q8NEY1 1877 aa10.61□□□□□ -0.71
SNCA-212ENST00000611107 TNNI2P48788 182 aa10.61□□□□□ -0.71
SNCA-212ENST00000611107 JAG1P78504 1218 aa10.61□□□□□ -0.71
SNCA-212ENST00000611107 IFNL1Q8IU54 200 aa10.61□□□□□ -0.71
SNCA-212ENST00000611107 OTUD5Q96G74 571 aa10.61□□□□□ -0.71
SNCA-212ENST00000611107 MCOLN1Q9GZU1 580 aa10.61□□□□□ -0.71
SNCA-212ENST00000611107 SAGE1Q9NXZ1 904 aa10.61□□□□□ -0.71
SNCA-212ENST00000611107 TMOD2Q9NZR1 351 aa10.61□□□□□ -0.71
SNCA-212ENST00000611107 DOCK1Q14185 1865 aa10.61□□□□□ -0.71
SNCA-212ENST00000611107 DDX60LQ5H9U9 1706 aaKnown RBP10.61□□□□□ -0.71
SNCA-212ENST00000611107 TESPA1A2RU30 521 aaPredicted RBP10.6□□□□□ -0.71
SNCA-212ENST00000611107 MOGSQ13724 837 aa10.6□□□□□ -0.71
SNCA-212ENST00000611107 ERC1Q8IUD2 1116 aa10.6□□□□□ -0.71
SNCA-212ENST00000611107 FAM43AQ8N2R8 423 aa10.6□□□□□ -0.71
SNCA-212ENST00000611107 ZGPATQ8N5A5 531 aaKnown RBP10.6□□□□□ -0.71
SNCA-212ENST00000611107 ZNF296Q8WUU4 475 aaPredicted RBP10.6□□□□□ -0.71
SNCA-212ENST00000611107 ABHD8Q96I13 439 aa10.6□□□□□ -0.71
SNCA-212ENST00000611107 AATFQ9NY61 560 aaKnown RBP eCLIP10.6□□□□□ -0.71
SNCA-212ENST00000611107 LRP2BPQ9P2M1 347 aa10.6□□□□□ -0.71
SNCA-212ENST00000611107 BAZ2AQ9UIF9 1905 aaKnown RBP10.6□□□□□ -0.71
SNCA-212ENST00000611107 SPDYE5A6NIY4 337 aa10.59□□□□□ -0.71
SNCA-212ENST00000611107 IRF6O14896 467 aa10.59□□□□□ -0.71
SNCA-212ENST00000611107 CA12O43570 354 aa10.59□□□□□ -0.71
SNCA-212ENST00000611107 ENTPD3O75355 529 aa10.59□□□□□ -0.71
SNCA-212ENST00000611107 ZBTB48P10074 688 aaPredicted RBP10.59□□□□□ -0.71
SNCA-212ENST00000611107 MAP3K10Q02779 954 aa10.59□□□□□ -0.71
SNCA-212ENST00000611107 HDAC1Q13547 482 aaPredicted RBP10.59□□□□□ -0.71
SNCA-212ENST00000611107 SLC4A8Q2Y0W8 1093 aa10.59□□□□□ -0.71
SNCA-212ENST00000611107 HSP90AB4PQ58FF6 505 aa10.59□□□□□ -0.71
SNCA-212ENST00000611107 CCDC158Q5M9N0 1113 aa10.59□□□□□ -0.71
SNCA-212ENST00000611107 TSHZ3Q63HK5 1081 aa10.59□□□□□ -0.71
SNCA-212ENST00000611107 SPTY2D1Q68D10 685 aaPredicted RBP10.59□□□□□ -0.71
SNCA-212ENST00000611107 MIGA1Q8NAN2 632 aa10.59□□□□□ -0.71
SNCA-212ENST00000611107 OTUD7AQ8TE49 926 aaPredicted RBP10.59□□□□□ -0.71
SNCA-212ENST00000611107 ZNF341Q9BYN7 854 aa10.59□□□□□ -0.71
SNCA-212ENST00000611107 DCTPP1Q9H773 170 aa10.59□□□□□ -0.71
SNCA-212ENST00000611107 DNAJC18Q9H819 358 aa10.59□□□□□ -0.71
SNCA-212ENST00000611107 MANSC4A6NHS7 340 aaPredicted RBP10.58□□□□□ -0.72
SNCA-212ENST00000611107 SMIM22K7EJ46 135 aa10.58□□□□□ -0.72
SNCA-212ENST00000611107 GPR25O00155 361 aa10.58□□□□□ -0.72
SNCA-212ENST00000611107 CYP7A1P22680 504 aa10.58□□□□□ -0.72
SNCA-212ENST00000611107 CRHR2Q13324 411 aa10.58□□□□□ -0.72
SNCA-212ENST00000611107 DGKZQ13574 1117 aa10.58□□□□□ -0.72
SNCA-212ENST00000611107 NAA16Q6N069 864 aaPredicted RBP10.58□□□□□ -0.72
SNCA-212ENST00000611107 MAPKAPK5Q8IW41 473 aa10.58□□□□□ -0.72
SNCA-212ENST00000611107 TEX11Q8IYF3 940 aa10.58□□□□□ -0.72
SNCA-212ENST00000611107 KIF1BPQ96EK5 621 aa10.58□□□□□ -0.72
SNCA-212ENST00000611107 OSBPL5Q9H0X9 879 aaPredicted RBP10.58□□□□□ -0.72
SNCA-212ENST00000611107 DOCK3Q8IZD9 2030 aa10.58□□□□□ -0.72
SNCA-212ENST00000611107 CCL15-CCL14A0A0B4J2E2 113 aa10.57□□□□□ -0.72
SNCA-212ENST00000611107 TCRBV5S4A2TA0A5A2 114 aa10.57□□□□□ -0.72
SNCA-212ENST00000611107 BTBD19C9JJ37 291 aa10.57□□□□□ -0.72
SNCA-212ENST00000611107 RAB11FIP3O75154 756 aa10.57□□□□□ -0.72
SNCA-212ENST00000611107 IDH1O75874 414 aaKnown RBP10.57□□□□□ -0.72
SNCA-212ENST00000611107 PPP4CP60510 307 aa10.57□□□□□ -0.72
SNCA-212ENST00000611107 CCL15Q16663 113 aa10.57□□□□□ -0.72
SNCA-212ENST00000611107 MAGEB6Q8N7X4 407 aa10.57□□□□□ -0.72
SNCA-212ENST00000611107 TGFBRAP1Q8WUH2 860 aa10.57□□□□□ -0.72
SNCA-212ENST00000611107 CFHR5Q9BXR6 569 aa10.57□□□□□ -0.72
SNCA-212ENST00000611107 BOLA2Q9H3K6 86 aa10.57□□□□□ -0.72
SNCA-212ENST00000611107 SAP30BPQ9UHR5 308 aaKnown RBP10.57□□□□□ -0.72
SNCA-212ENST00000611107 HTTP42858 3142 aa10.56□□□□□ -0.72
SNCA-212ENST00000611107 UNCXA6NJT0 531 aa10.56□□□□□ -0.72
SNCA-212ENST00000611107 GOLIM4O00461 696 aa10.56□□□□□ -0.72
SNCA-212ENST00000611107 IGHDP01880 384 aa10.56□□□□□ -0.72
SNCA-212ENST00000611107 CTGFP29279 349 aa10.56□□□□□ -0.72
SNCA-212ENST00000611107 SREBF2Q12772 1141 aa10.56□□□□□ -0.72
SNCA-212ENST00000611107 PPIL2Q13356 520 aa10.56□□□□□ -0.72
SNCA-212ENST00000611107 NOL9Q5SY16 702 aaKnown RBP10.56□□□□□ -0.72
SNCA-212ENST00000611107 DCAF15Q66K64 600 aa10.56□□□□□ -0.72
SNCA-212ENST00000611107 GPAT2Q6NUI2 795 aa10.56□□□□□ -0.72
SNCA-212ENST00000611107 ERO1BQ86YB8 467 aa10.56□□□□□ -0.72
SNCA-212ENST00000611107 ZSCAN29Q8IWY8 852 aaPredicted RBP10.56□□□□□ -0.72
SNCA-212ENST00000611107 DNAJC2Q99543 621 aaKnown RBP10.56□□□□□ -0.72
SNCA-212ENST00000611107 RIOK1Q9BRS2 568 aaKnown RBP10.56□□□□□ -0.72
SNCA-212ENST00000611107 LRRCC1Q9C099 1032 aa10.56□□□□□ -0.72
SNCA-212ENST00000611107 PALD1Q9ULE6 856 aa10.56□□□□□ -0.72
SNCA-212ENST00000611107 CSADQ9Y600 493 aa10.56□□□□□ -0.72
SNCA-212ENST00000611107 FLT1P17948 1338 aa10.56□□□□□ -0.72
SNCA-212ENST00000611107 NPM3O75607 178 aaKnown RBP10.55□□□□□ -0.72
SNCA-212ENST00000611107 LDHCP07864 332 aa10.55□□□□□ -0.72
SNCA-212ENST00000611107 PDE6AP16499 860 aa10.55□□□□□ -0.72
SNCA-212ENST00000611107 PTPRAP18433 802 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms