RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 GNAT2P19087 354 aa21.43■■□□□ 1.02
SNAPC3-207ENST00000610884 R3HDM1Q15032 1099 aaKnown RBP21.43■■□□□ 1.02
SNAPC3-207ENST00000610884 AOC3Q16853 763 aa21.43■■□□□ 1.02
SNAPC3-207ENST00000610884 AGXT2Q9BYV1 514 aa21.43■■□□□ 1.02
SNAPC3-207ENST00000610884 MTMR6Q9Y217 621 aa21.43■■□□□ 1.02
SNAPC3-207ENST00000610884 RANBP6O60518 1105 aaKnown RBP21.42■■□□□ 1.02
SNAPC3-207ENST00000610884 PFKFB2O60825 505 aa21.42■■□□□ 1.02
SNAPC3-207ENST00000610884 NFXL1Q6ZNB6 911 aa21.42■■□□□ 1.02
SNAPC3-207ENST00000610884 IGDCC4Q8TDY8 1250 aa21.42■■□□□ 1.02
SNAPC3-207ENST00000610884 CNPY2Q9Y2B0 182 aa21.42■■□□□ 1.02
SNAPC3-207ENST00000610884 NRXN2Q9P2S2 1712 aa21.42■■□□□ 1.02
SNAPC3-207ENST00000610884 IFIT3O14879 490 aaKnown RBP21.41■■□□□ 1.02
SNAPC3-207ENST00000610884 ZSCAN22P10073 491 aaPredicted RBP21.41■■□□□ 1.02
SNAPC3-207ENST00000610884 BTDP43251 543 aa21.41■■□□□ 1.02
SNAPC3-207ENST00000610884 TMEM67Q5HYA8 995 aa21.41■■□□□ 1.02
SNAPC3-207ENST00000610884 TCHHQ07283 1943 aa21.41■■□□□ 1.02
SNAPC3-207ENST00000610884 PTPDC1A2A3K4 754 aa21.41■■□□□ 1.02
SNAPC3-207ENST00000610884 DPEP1P16444 411 aa21.41■■□□□ 1.02
SNAPC3-207ENST00000610884 HMGB2P26583 209 aaKnown RBP21.41■■□□□ 1.02
SNAPC3-207ENST00000610884 CLCN1P35523 988 aa21.41■■□□□ 1.02
SNAPC3-207ENST00000610884 USP5P45974 858 aa21.41■■□□□ 1.02
SNAPC3-207ENST00000610884 SLC44A5Q8NCS7 719 aa21.41■■□□□ 1.02
SNAPC3-207ENST00000610884 NSUN7Q8NE18 718 aaKnown RBP21.41■■□□□ 1.02
SNAPC3-207ENST00000610884 TMX4Q9H1E5 349 aaPredicted RBP21.41■■□□□ 1.02
SNAPC3-207ENST00000610884 DUOX1Q9NRD9 1551 aa21.41■■□□□ 1.02
SNAPC3-207ENST00000610884 C15orf52Q6ZUT6 534 aaKnown RBP21.4■■□□□ 1.02
SNAPC3-207ENST00000610884 ILDR1Q86SU0 546 aaPredicted RBP21.4■■□□□ 1.02
SNAPC3-207ENST00000610884 GAS2L3Q86XJ1 694 aa21.4■■□□□ 1.02
SNAPC3-207ENST00000610884 SPTY2D1Q68D10 685 aaPredicted RBP21.4■■□□□ 1.02
SNAPC3-207ENST00000610884 AIFM3Q96NN9 605 aa21.4■■□□□ 1.02
SNAPC3-207ENST00000610884 NAP1L5Q96NT1 182 aaPredicted RBP21.4■■□□□ 1.02
SNAPC3-207ENST00000610884 ISY1Q9ULR0 285 aaKnown RBP21.4■■□□□ 1.02
SNAPC3-207ENST00000610884 WDR33Q9C0J8 1336 aaKnown RBP21.39■■□□□ 1.02
SNAPC3-207ENST00000610884 PLCD1P51178 756 aa21.39■■□□□ 1.02
SNAPC3-207ENST00000610884 DNM1Q05193 864 aaKnown RBP21.39■■□□□ 1.02
SNAPC3-207ENST00000610884 CRNKL1Q9BZJ0 848 aaKnown RBP21.39■■□□□ 1.02
SNAPC3-207ENST00000610884 ANGEL1Q9UNK9 670 aaKnown RBP21.39■■□□□ 1.02
SNAPC3-207ENST00000610884 SH2B2O14492 632 aaPredicted RBP21.39■■□□□ 1.01
SNAPC3-207ENST00000610884 CDC27P30260 824 aa21.39■■□□□ 1.01
SNAPC3-207ENST00000610884 KIAA0825Q8IV33 1275 aa21.39■■□□□ 1.01
SNAPC3-207ENST00000610884 PHKBQ93100 1093 aa21.39■■□□□ 1.01
SNAPC3-207ENST00000610884 RTFDC1Q9BY42 306 aaPredicted RBP21.39■■□□□ 1.01
SNAPC3-207ENST00000610884 LY9Q9HBG7 655 aa21.39■■□□□ 1.01
SNAPC3-207ENST00000610884 LMBRD1Q9NUN5 540 aa21.39■■□□□ 1.01
SNAPC3-207ENST00000610884 GADD45BO75293 160 aaPredicted RBP21.38■■□□□ 1.01
SNAPC3-207ENST00000610884 PICALMQ13492 652 aa21.38■■□□□ 1.01
SNAPC3-207ENST00000610884 F13A1P00488 732 aa21.38■■□□□ 1.01
SNAPC3-207ENST00000610884 FDPSP14324 419 aaKnown RBP21.38■■□□□ 1.01
SNAPC3-207ENST00000610884 CACNB3P54284 484 aa21.38■■□□□ 1.01
SNAPC3-207ENST00000610884 STAG1Q8WVM7 1258 aa21.38■■□□□ 1.01
SNAPC3-207ENST00000610884 TFIP11Q9UBB9 837 aaKnown RBP21.38■■□□□ 1.01
SNAPC3-207ENST00000610884 TTF2Q9UNY4 1162 aaKnown RBP21.38■■□□□ 1.01
SNAPC3-207ENST00000610884 KCNA3P22001 575 aa21.37■■□□□ 1.01
SNAPC3-207ENST00000610884 FAM184AQ8NB25 1140 aa21.37■■□□□ 1.01
SNAPC3-207ENST00000610884 RBM27Q9P2N5 1060 aaKnown RBP21.37■■□□□ 1.01
SNAPC3-207ENST00000610884 DDX49Q9Y6V7 483 aaKnown RBP21.37■■□□□ 1.01
SNAPC3-207ENST00000610884 PDS5AQ29RF7 1337 aaKnown RBP21.37■■□□□ 1.01
SNAPC3-207ENST00000610884 FIBPO43427 364 aa21.37■■□□□ 1.01
SNAPC3-207ENST00000610884 SKOR2Q2VWA4 1001 aaPredicted RBP21.37■■□□□ 1.01
SNAPC3-207ENST00000610884 C7orf43Q8WVR3 580 aa21.37■■□□□ 1.01
SNAPC3-207ENST00000610884 COA1Q9GZY4 146 aa21.37■■□□□ 1.01
SNAPC3-207ENST00000610884 MTMR7Q9Y216 660 aa21.37■■□□□ 1.01
SNAPC3-207ENST00000610884 MYH2Q9UKX2 1941 aa21.37■■□□□ 1.01
SNAPC3-207ENST00000610884 SALL1Q9NSC2 1324 aa21.37■■□□□ 1.01
SNAPC3-207ENST00000610884 NUP133Q8WUM0 1156 aa21.36■■□□□ 1.01
SNAPC3-207ENST00000610884 ZNF274Q96GC6 653 aaPredicted RBP21.36■■□□□ 1.01
SNAPC3-207ENST00000610884 MROH7-TTC4A0A0A0MT08 1334 aa21.36■■□□□ 1.01
SNAPC3-207ENST00000610884 STYK1Q6J9G0 422 aa21.36■■□□□ 1.01
SNAPC3-207ENST00000610884 APOA5Q6Q788 366 aa21.36■■□□□ 1.01
SNAPC3-207ENST00000610884 LTBP1Q14766 1721 aa21.35■■□□□ 1.01
SNAPC3-207ENST00000610884 GPT2Q8TD30 523 aa21.35■■□□□ 1.01
SNAPC3-207ENST00000610884 hCG_1642624A0A1W2PR95 340 aa21.35■■□□□ 1.01
SNAPC3-207ENST00000610884 CEBPZQ03701 1054 aaKnown RBP21.35■■□□□ 1.01
SNAPC3-207ENST00000610884 USP48Q86UV5 1035 aa21.35■■□□□ 1.01
SNAPC3-207ENST00000610884 ZNF277Q9NRM2 450 aaPredicted RBP21.35■■□□□ 1.01
SNAPC3-207ENST00000610884 CCDC88AQ3V6T2 1871 aa21.35■■□□□ 1.01
SNAPC3-207ENST00000610884 ECE2O60344 883 aa21.34■■□□□ 1.01
SNAPC3-207ENST00000610884 CLEC17AQ6ZS10 378 aa21.34■■□□□ 1.01
SNAPC3-207ENST00000610884 TMC4Q7Z404 712 aa21.34■■□□□ 1.01
SNAPC3-207ENST00000610884 CNKSR1Q969H4 720 aa21.34■■□□□ 1.01
SNAPC3-207ENST00000610884 DAGLAQ9Y4D2 1042 aa21.34■■□□□ 1.01
SNAPC3-207ENST00000610884 PTMSP20962 102 aa21.34■■□□□ 1.01
SNAPC3-207ENST00000610884 METAP2P50579 478 aaKnown RBP eCLIP21.34■■□□□ 1.01
SNAPC3-207ENST00000610884 TEX11Q8IYF3 940 aa21.34■■□□□ 1.01
SNAPC3-207ENST00000610884 KRT23Q9C075 422 aa21.34■■□□□ 1.01
SNAPC3-207ENST00000610884 FTOQ9C0B1 505 aaKnown RBP eCLIP21.34■■□□□ 1.01
SNAPC3-207ENST00000610884 TNKSO95271 1327 aa21.34■■□□□ 1.01
SNAPC3-207ENST00000610884 GOLGA6L22H0YM25 854 aa21.33■■□□□ 1.01
SNAPC3-207ENST00000610884 CPLX1O14810 134 aa21.33■■□□□ 1.01
SNAPC3-207ENST00000610884 MKRN1Q9UHC7 482 aaKnown RBP21.33■■□□□ 1.01
SNAPC3-207ENST00000610884 LRRC37AA6NMS7 1700 aa21.33■■□□□ 1.01
SNAPC3-207ENST00000610884 ESPNB1AK53 854 aa21.33■■□□□ 1
SNAPC3-207ENST00000610884 H3BQV1 296 aa21.33■■□□□ 1
SNAPC3-207ENST00000610884 BAG3O95817 575 aa21.33■■□□□ 1
SNAPC3-207ENST00000610884 IFFO2Q5TF58 517 aa21.33■■□□□ 1
SNAPC3-207ENST00000610884 SMARCC2Q8TAQ2 1214 aa21.33■■□□□ 1
SNAPC3-207ENST00000610884 TRIM44Q96DX7 344 aaPredicted RBP21.33■■□□□ 1
SNAPC3-207ENST00000610884 FAM217BQ9NTX9 383 aaPredicted RBP21.33■■□□□ 1
SNAPC3-207ENST00000610884 SLC12A7Q9Y666 1083 aa21.33■■□□□ 1
SNAPC3-207ENST00000610884 RGPD3A6NKT7 1758 aaPredicted RBP21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms