RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 L2HGDHQ9H9P8 463 aa23.42■■□□□ 1.34
SSBP3-216ENST00000610401 PCDHB6Q9Y5E3 794 aa23.42■■□□□ 1.34
SSBP3-216ENST00000610401 DNAJC10Q8IXB1 793 aa23.42■■□□□ 1.34
SSBP3-216ENST00000610401 DHX58Q96C10 678 aa23.42■■□□□ 1.34
SSBP3-216ENST00000610401 PRDM11Q9NQV5 511 aa23.42■■□□□ 1.34
SSBP3-216ENST00000610401 ZSWIM5Q9P217 1185 aa23.42■■□□□ 1.34
SSBP3-216ENST00000610401 VWA3AA6NCI4 1184 aa23.42■■□□□ 1.34
SSBP3-216ENST00000610401 H2AFXP16104 143 aaPredicted RBP23.42■■□□□ 1.34
SSBP3-216ENST00000610401 DIS3L2Q8IYB7 885 aaKnown RBP23.42■■□□□ 1.34
SSBP3-216ENST00000610401 TEX33O43247 280 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 PRDM1O75626 825 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 KRBA2Q6ZNG9 492 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 CABP5Q9NP86 173 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 ASAP1Q9ULH1 1129 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 MINDY4BA8MYZ0 360 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 SASH3O75995 380 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 CCDC93Q567U6 631 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 VSTM4Q8IW00 320 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 MAGEB6Q8N7X4 407 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 JMYQ8N9B5 988 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 EEF2KMTQ96G04 330 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 NAPBQ9H115 298 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 ARGLU1Q9NWB6 273 aaPredicted RBP23.41■■□□□ 1.34
SSBP3-216ENST00000610401 TBC1D2BQ9UPU7 963 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 MAPK8IP1Q9UQF2 711 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 AKAP2Q9Y2D5 859 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 PARP3Q9Y6F1 533 aa23.41■■□□□ 1.34
SSBP3-216ENST00000610401 MCM6Q14566 821 aa23.4■■□□□ 1.34
SSBP3-216ENST00000610401 KLHL34Q8N239 644 aa23.4■■□□□ 1.34
SSBP3-216ENST00000610401 ZCRB1Q8TBF4 217 aaKnown RBP23.4■■□□□ 1.34
SSBP3-216ENST00000610401 BBXQ8WY36 941 aaPredicted RBP23.4■■□□□ 1.34
SSBP3-216ENST00000610401 HINFPQ9BQA5 517 aa23.4■■□□□ 1.34
SSBP3-216ENST00000610401 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.4■■□□□ 1.34
SSBP3-216ENST00000610401 UBN2Q6ZU65 1347 aa23.4■■□□□ 1.34
SSBP3-216ENST00000610401 PES1O00541 588 aaKnown RBP23.4■■□□□ 1.34
SSBP3-216ENST00000610401 PTPAQ15257 358 aa23.4■■□□□ 1.34
SSBP3-216ENST00000610401 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.4■■□□□ 1.341e-6■■■□□ 17.7
SSBP3-216ENST00000610401 MBD4O95243 580 aa23.4■■□□□ 1.34
SSBP3-216ENST00000610401 SSRP1Q08945 709 aaKnown RBP23.39■■□□□ 1.34
SSBP3-216ENST00000610401 MAN1B1Q9UKM7 699 aa23.39■■□□□ 1.34
SSBP3-216ENST00000610401 BAZ2BQ9UIF8 2168 aaKnown RBP23.39■■□□□ 1.33
SSBP3-216ENST00000610401 PPP2R3AQ06190 1150 aa23.39■■□□□ 1.33
SSBP3-216ENST00000610401 LRRFIP1Q32MZ4 808 aaKnown RBP23.39■■□□□ 1.33
SSBP3-216ENST00000610401 ZMYM6O95789 1325 aa23.39■■□□□ 1.33
SSBP3-216ENST00000610401 C5P01031 1676 aa23.38■■□□□ 1.33
SSBP3-216ENST00000610401 CHD2O14647 1828 aaKnown RBP23.38■■□□□ 1.33
SSBP3-216ENST00000610401 SH2B2O14492 632 aaPredicted RBP23.38■■□□□ 1.33
SSBP3-216ENST00000610401 CBFA2T2O43439 604 aa23.38■■□□□ 1.33
SSBP3-216ENST00000610401 PHACTR2O75167 634 aa23.38■■□□□ 1.33
SSBP3-216ENST00000610401 CCT6AP40227 531 aaKnown RBP23.38■■□□□ 1.33
SSBP3-216ENST00000610401 HNRNPH2P55795 449 aaKnown RBP23.38■■□□□ 1.33
SSBP3-216ENST00000610401 GPIHBP1Q8IV16 184 aa23.38■■□□□ 1.33
SSBP3-216ENST00000610401 SUGCTQ9HAC7 445 aa23.38■■□□□ 1.33
SSBP3-216ENST00000610401 MTMR7Q9Y216 660 aa23.38■■□□□ 1.33
SSBP3-216ENST00000610401 TDO2P48775 406 aa23.38■■□□□ 1.33
SSBP3-216ENST00000610401 POSTNQ15063 836 aa23.38■■□□□ 1.33
SSBP3-216ENST00000610401 KRI1Q8N9T8 703 aaKnown RBP23.38■■□□□ 1.33
SSBP3-216ENST00000610401 EPSTI1Q96J88 318 aa23.38■■□□□ 1.33
SSBP3-216ENST00000610401 MRPL44Q9H9J2 332 aaKnown RBP23.38■■□□□ 1.33
SSBP3-216ENST00000610401 TRMT112Q9UI30 125 aaKnown RBP23.38■■□□□ 1.33
SSBP3-216ENST00000610401 LMO7Q8WWI1 1683 aa23.37■■□□□ 1.33
SSBP3-216ENST00000610401 OAS2P29728 719 aaKnown RBP23.37■■□□□ 1.33
SSBP3-216ENST00000610401 MAP3K14Q99558 947 aa23.37■■□□□ 1.33
SSBP3-216ENST00000610401 TADA3O75528 432 aa23.37■■□□□ 1.33
SSBP3-216ENST00000610401 PDE6AP16499 860 aa23.37■■□□□ 1.33
SSBP3-216ENST00000610401 SMARCE1Q969G3 411 aa23.37■■□□□ 1.33
SSBP3-216ENST00000610401 RGPD5Q99666 1765 aa23.36■■□□□ 1.33
SSBP3-216ENST00000610401 ABL1P00519 1130 aa23.36■■□□□ 1.33
SSBP3-216ENST00000610401 RHOXF2BP0C7M4 288 aa23.36■■□□□ 1.33
SSBP3-216ENST00000610401 RHOXF2Q9BQY4 288 aa23.36■■□□□ 1.33
SSBP3-216ENST00000610401 TACC3Q9Y6A5 838 aa23.36■■□□□ 1.33
SSBP3-216ENST00000610401 ZFYP08048 801 aaPredicted RBP23.36■■□□□ 1.33
SSBP3-216ENST00000610401 CDC25AP30304 524 aa23.36■■□□□ 1.33
SSBP3-216ENST00000610401 ADD2P35612 726 aa23.36■■□□□ 1.33
SSBP3-216ENST00000610401 SAFBQ15424 915 aaKnown RBP eCLIP23.36■■□□□ 1.33
SSBP3-216ENST00000610401 RESP18Q5W5W9 173 aa23.36■■□□□ 1.33
SSBP3-216ENST00000610401 LAMA4Q16363 1823 aa23.36■■□□□ 1.33
SSBP3-216ENST00000610401 IKBKBO14920 756 aa23.36■■□□□ 1.33
SSBP3-216ENST00000610401 ZSCAN12O43309 604 aa23.36■■□□□ 1.33
SSBP3-216ENST00000610401 TOB1P50616 345 aaPredicted RBP23.36■■□□□ 1.33
SSBP3-216ENST00000610401 TCIRG1Q13488 830 aa23.36■■□□□ 1.33
SSBP3-216ENST00000610401 PARD6BQ9BYG5 372 aa23.36■■□□□ 1.33
SSBP3-216ENST00000610401 FAM217BQ9NTX9 383 aaPredicted RBP23.36■■□□□ 1.33
SSBP3-216ENST00000610401 ABCF2Q9UG63 623 aa23.36■■□□□ 1.33
SSBP3-216ENST00000610401 TUBE1Q9UJT0 475 aa23.36■■□□□ 1.33
SSBP3-216ENST00000610401 NOM1Q5C9Z4 860 aaKnown RBP23.35■■□□□ 1.33
SSBP3-216ENST00000610401 BPIFA3Q9BQP9 254 aa23.35■■□□□ 1.33
SSBP3-216ENST00000610401 GPR108Q9NPR9 543 aa23.35■■□□□ 1.33
SSBP3-216ENST00000610401 VPS54Q9P1Q0 977 aa23.35■■□□□ 1.33
SSBP3-216ENST00000610401 CCDC66A2RUB6 948 aa23.35■■□□□ 1.33
SSBP3-216ENST00000610401 CDKL5O76039 1030 aa23.35■■□□□ 1.33
SSBP3-216ENST00000610401 KIF6Q6ZMV9 814 aa23.35■■□□□ 1.33
SSBP3-216ENST00000610401 BLZF1Q9H2G9 400 aa23.35■■□□□ 1.33
SSBP3-216ENST00000610401 LY9Q9HBG7 655 aa23.35■■□□□ 1.33
SSBP3-216ENST00000610401 NOSTRINQ8IVI9 506 aa23.34■■□□□ 1.33
SSBP3-216ENST00000610401 TC2NQ8N9U0 490 aa23.34■■□□□ 1.33
SSBP3-216ENST00000610401 CSRNP2Q9H175 543 aa23.34■■□□□ 1.33
SSBP3-216ENST00000610401 HPSEQ9Y251 543 aa23.34■■□□□ 1.33
SSBP3-216ENST00000610401 SDR42E1Q8WUS8 393 aa23.34■■□□□ 1.33
SSBP3-216ENST00000610401 RFX7Q2KHR2 1363 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms