RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 ADGRA1Q86SQ6 560 aa17.31■□□□□ 0.36
HDDC2-209ENST00000609477 TEX11Q8IYF3 940 aa17.31■□□□□ 0.36
HDDC2-209ENST00000609477 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.31■□□□□ 0.367e-6■■■□□ 14.8
HDDC2-209ENST00000609477 ZNF341Q9BYN7 854 aa17.31■□□□□ 0.36
HDDC2-209ENST00000609477 DHX36Q9H2U1 1008 aaKnown RBP17.31■□□□□ 0.36
HDDC2-209ENST00000609477 GLRX3O76003 335 aaKnown RBP17.3■□□□□ 0.36
HDDC2-209ENST00000609477 HSPA1AP0DMV8 641 aaKnown RBP17.3■□□□□ 0.36
HDDC2-209ENST00000609477 HSPA1BP0DMV9 641 aaKnown RBP17.3■□□□□ 0.36
HDDC2-209ENST00000609477 INHBEP58166 350 aa17.3■□□□□ 0.36
HDDC2-209ENST00000609477 ZSCAN29Q8IWY8 852 aaPredicted RBP17.3■□□□□ 0.36
HDDC2-209ENST00000609477 CDAN1Q8IWY9 1227 aa17.3■□□□□ 0.36
HDDC2-209ENST00000609477 CSRNP1Q96S65 589 aa17.3■□□□□ 0.36
HDDC2-209ENST00000609477 DDX4Q9NQI0 724 aaKnown RBP17.3■□□□□ 0.36
HDDC2-209ENST00000609477 ZNF112Q9UJU3 913 aa17.3■□□□□ 0.36
HDDC2-209ENST00000609477 CSADQ9Y600 493 aa17.3■□□□□ 0.36
HDDC2-209ENST00000609477 TBC1D12O60347 775 aa17.29■□□□□ 0.36
HDDC2-209ENST00000609477 PDE6AP16499 860 aa17.29■□□□□ 0.36
HDDC2-209ENST00000609477 MX1P20591 662 aa17.29■□□□□ 0.36
HDDC2-209ENST00000609477 KIF23Q02241 960 aaPredicted RBP17.29■□□□□ 0.36
HDDC2-209ENST00000609477 PICALMQ13492 652 aa17.29■□□□□ 0.36
HDDC2-209ENST00000609477 UBE3CQ15386 1083 aa17.29■□□□□ 0.36
HDDC2-209ENST00000609477 LRRFIP1Q32MZ4 808 aaKnown RBP17.29■□□□□ 0.36
HDDC2-209ENST00000609477 SPRYD7Q5W111 196 aa17.29■□□□□ 0.36
HDDC2-209ENST00000609477 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.29■□□□□ 0.36
HDDC2-209ENST00000609477 SH3RF3Q8TEJ3 882 aaPredicted RBP17.29■□□□□ 0.36
HDDC2-209ENST00000609477 OSBPL5Q9H0X9 879 aaPredicted RBP17.29■□□□□ 0.36
HDDC2-209ENST00000609477 FZD1Q9UP38 647 aa17.29■□□□□ 0.36
HDDC2-209ENST00000609477 FOCADQ5VW36 1801 aa17.28■□□□□ 0.36
HDDC2-209ENST00000609477 SREBF2Q12772 1141 aa17.28■□□□□ 0.36
HDDC2-209ENST00000609477 ZFPM1Q8IX07 1006 aa17.28■□□□□ 0.36
HDDC2-209ENST00000609477 SAGE1Q9NXZ1 904 aa17.28■□□□□ 0.36
HDDC2-209ENST00000609477 STAP2Q9UGK3 403 aa17.28■□□□□ 0.36
HDDC2-209ENST00000609477 LAMB1P07942 1786 aa17.28■□□□□ 0.36
HDDC2-209ENST00000609477 SALL3Q9BXA9 1300 aa17.27■□□□□ 0.36
HDDC2-209ENST00000609477 ZNF532Q9HCE3 1301 aa17.27■□□□□ 0.36
HDDC2-209ENST00000609477 TCRBV5S4A2TA0A5A2 114 aa17.27■□□□□ 0.36
HDDC2-209ENST00000609477 DDTLA6NHG4 134 aaPredicted RBP17.27■□□□□ 0.36
HDDC2-209ENST00000609477 MANSC4A6NHS7 340 aaPredicted RBP17.27■□□□□ 0.36
HDDC2-209ENST00000609477 ADD2P35612 726 aa17.27■□□□□ 0.36
HDDC2-209ENST00000609477 TM4SF4P48230 202 aa17.27■□□□□ 0.36
HDDC2-209ENST00000609477 CTCFP49711 727 aaPredicted RBP17.27■□□□□ 0.36
HDDC2-209ENST00000609477 MIGA2Q7L4E1 593 aa17.27■□□□□ 0.36
HDDC2-209ENST00000609477 SH3BP5LQ7L8J4 393 aa17.27■□□□□ 0.36
HDDC2-209ENST00000609477 TICAM2Q86XR7 235 aa17.27■□□□□ 0.36
HDDC2-209ENST00000609477 KBTBD3Q8NAB2 608 aa17.27■□□□□ 0.36
HDDC2-209ENST00000609477 WNK4Q96J92 1243 aa17.27■□□□□ 0.36
HDDC2-209ENST00000609477 WRNIP1Q96S55 665 aa17.27■□□□□ 0.36
HDDC2-209ENST00000609477 RIOK1Q9BRS2 568 aaKnown RBP17.27■□□□□ 0.36
HDDC2-209ENST00000609477 PI4KBQ9UBF8 816 aa17.27■□□□□ 0.36
HDDC2-209ENST00000609477 HERC5Q9UII4 1024 aaKnown RBP17.27■□□□□ 0.36
HDDC2-209ENST00000609477 OTOFQ9HC10 1997 aa17.27■□□□□ 0.36
HDDC2-209ENST00000609477 CDK5RAP2Q96SN8 1893 aa17.27■□□□□ 0.35
HDDC2-209ENST00000609477 MYH7P12883 1935 aa17.26■□□□□ 0.35
HDDC2-209ENST00000609477 MAGEB6P1A0A0J9YX57 407 aa17.26■□□□□ 0.35
HDDC2-209ENST00000609477 IGHDP01880 384 aa17.26■□□□□ 0.35
HDDC2-209ENST00000609477 ZFYP08048 801 aaPredicted RBP17.26■□□□□ 0.35
HDDC2-209ENST00000609477 VGLL4Q14135 290 aa17.26■□□□□ 0.35
HDDC2-209ENST00000609477 NOL9Q5SY16 702 aaKnown RBP17.26■□□□□ 0.35
HDDC2-209ENST00000609477 ERO1BQ86YB8 467 aa17.26■□□□□ 0.35
HDDC2-209ENST00000609477 PI4K2BQ8TCG2 481 aa17.26■□□□□ 0.35
HDDC2-209ENST00000609477 TGFBRAP1Q8WUH2 860 aa17.26■□□□□ 0.35
HDDC2-209ENST00000609477 EDC3Q96F86 508 aaKnown RBP17.26■□□□□ 0.35
HDDC2-209ENST00000609477 CLMNQ96JQ2 1002 aa17.26■□□□□ 0.35
HDDC2-209ENST00000609477 FLT1P17948 1338 aa17.25■□□□□ 0.35
HDDC2-209ENST00000609477 NUCB1Q02818 461 aa17.25■□□□□ 0.35
HDDC2-209ENST00000609477 CHD1LQ86WJ1 897 aa17.25■□□□□ 0.35
HDDC2-209ENST00000609477 FOXP4Q8IVH2 680 aaPredicted RBP17.25■□□□□ 0.35
HDDC2-209ENST00000609477 MIGA1Q8NAN2 632 aa17.25■□□□□ 0.35
HDDC2-209ENST00000609477 ZIC5Q96T25 663 aa17.25■□□□□ 0.35
HDDC2-209ENST00000609477 CRNKL1Q9BZJ0 848 aaKnown RBP17.25■□□□□ 0.35
HDDC2-209ENST00000609477 TAOK2Q9UL54 1235 aa17.25■□□□□ 0.35
HDDC2-209ENST00000609477 SPDYE5A6NIY4 337 aa17.24■□□□□ 0.35
HDDC2-209ENST00000609477 PHF20L1A8MW92 1017 aa17.24■□□□□ 0.35
HDDC2-209ENST00000609477 FOXN1O15353 648 aa17.24■□□□□ 0.35
HDDC2-209ENST00000609477 CTNND1O60716 968 aaKnown RBP17.24■□□□□ 0.35
HDDC2-209ENST00000609477 ALDH1A1P00352 501 aa17.24■□□□□ 0.35
HDDC2-209ENST00000609477 USP5P45974 858 aa17.24■□□□□ 0.35
HDDC2-209ENST00000609477 PDE1AP54750 535 aa17.24■□□□□ 0.35
HDDC2-209ENST00000609477 DYNLL1P63167 89 aaKnown RBP17.24■□□□□ 0.35
HDDC2-209ENST00000609477 PPATQ06203 517 aa17.24■□□□□ 0.35
HDDC2-209ENST00000609477 METTL16Q86W50 562 aaKnown RBP17.24■□□□□ 0.35
HDDC2-209ENST00000609477 OPTNQ96CV9 577 aa17.24■□□□□ 0.35
HDDC2-209ENST00000609477 ELP3Q9H9T3 547 aa17.24■□□□□ 0.35
HDDC2-209ENST00000609477 SNCAIPQ9Y6H5 919 aa17.24■□□□□ 0.35
HDDC2-209ENST00000609477 HLA-DOAP06340 250 aa17.23■□□□□ 0.35
HDDC2-209ENST00000609477 MAPKAPK5Q8IW41 473 aa17.23■□□□□ 0.35
HDDC2-209ENST00000609477 ZKSCAN4Q969J2 545 aaPredicted RBP17.23■□□□□ 0.35
HDDC2-209ENST00000609477 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.23■□□□□ 0.35
HDDC2-209ENST00000609477 PRDM10Q9NQV6 1147 aa17.23■□□□□ 0.35
HDDC2-209ENST00000609477 TESPA1A2RU30 521 aaPredicted RBP17.22■□□□□ 0.35
HDDC2-209ENST00000609477 INPP5BP32019 993 aa17.22■□□□□ 0.35
HDDC2-209ENST00000609477 GTF2A2P52657 109 aa17.22■□□□□ 0.35
HDDC2-209ENST00000609477 IRX6P78412 446 aaPredicted RBP17.22■□□□□ 0.35
HDDC2-209ENST00000609477 PPIL2Q13356 520 aa17.22■□□□□ 0.35
HDDC2-209ENST00000609477 TSHZ3Q63HK5 1081 aa17.22■□□□□ 0.35
HDDC2-209ENST00000609477 OTUD7BQ6GQQ9 843 aa17.22■□□□□ 0.35
HDDC2-209ENST00000609477 TTC6Q86TZ1 520 aa17.22■□□□□ 0.35
HDDC2-209ENST00000609477 OTUD7AQ8TE49 926 aaPredicted RBP17.22■□□□□ 0.35
HDDC2-209ENST00000609477 LNPKQ9C0E8 428 aa17.22■□□□□ 0.35
HDDC2-209ENST00000609477 OSBPL3Q9H4L5 887 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms