RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 RPAP1Q9BWH6 1393 aaPredicted RBP12.72□□□□□ -0.37
LINC01001-203ENST00000607448 CENPFP49454 3210 aa12.72□□□□□ -0.37
LINC01001-203ENST00000607448 SLURP2P0DP57 97 aa12.71□□□□□ -0.37
LINC01001-203ENST00000607448 DDIT3P35638 169 aa12.71□□□□□ -0.37
LINC01001-203ENST00000607448 TTC22Q5TAA0 569 aa12.71□□□□□ -0.37
LINC01001-203ENST00000607448 FKBP1CQ5VVH2 108 aa12.71□□□□□ -0.37
LINC01001-203ENST00000607448 DZIP1Q86YF9 867 aaKnown RBP12.71□□□□□ -0.37
LINC01001-203ENST00000607448 PLEKHM2Q8IWE5 1019 aa12.71□□□□□ -0.37
LINC01001-203ENST00000607448 ANKRD13AQ8IZ07 590 aa12.71□□□□□ -0.37
LINC01001-203ENST00000607448 ZGPATQ8N5A5 531 aaKnown RBP12.71□□□□□ -0.37
LINC01001-203ENST00000607448 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC01001-203ENST00000607448 SLC10A4Q96EP9 437 aa12.71□□□□□ -0.37
LINC01001-203ENST00000607448 ELP3Q9H9T3 547 aa12.71□□□□□ -0.37
LINC01001-203ENST00000607448 USP40Q9NVE5 1235 aa12.71□□□□□ -0.37
LINC01001-203ENST00000607448 SAGE1Q9NXZ1 904 aa12.71□□□□□ -0.37
LINC01001-203ENST00000607448 TMOD2Q9NZR1 351 aa12.71□□□□□ -0.37
LINC01001-203ENST00000607448 NDUFB9Q9Y6M9 179 aa12.71□□□□□ -0.37
LINC01001-203ENST00000607448 ATAD5Q96QE3 1844 aa12.71□□□□□ -0.38
LINC01001-203ENST00000607448 MROH7-TTC4A0A0A0MT08 1334 aa12.71□□□□□ -0.38
LINC01001-203ENST00000607448 PHIPQ8WWQ0 1821 aa12.7□□□□□ -0.38
LINC01001-203ENST00000607448 TBC1D8O95759 1140 aa12.7□□□□□ -0.38
LINC01001-203ENST00000607448 BTDP43251 543 aa12.7□□□□□ -0.38
LINC01001-203ENST00000607448 TM4SF4P48230 202 aa12.7□□□□□ -0.38
LINC01001-203ENST00000607448 VGLL4Q14135 290 aa12.7□□□□□ -0.38
LINC01001-203ENST00000607448 MIGA2Q7L4E1 593 aa12.7□□□□□ -0.38
LINC01001-203ENST00000607448 FAM151AQ8WW52 585 aa12.7□□□□□ -0.38
LINC01001-203ENST00000607448 NSUN4Q96CB9 384 aaKnown RBP12.7□□□□□ -0.38
LINC01001-203ENST00000607448 R3HDMLQ9H3Y0 253 aa12.7□□□□□ -0.38
LINC01001-203ENST00000607448 DDX4Q9NQI0 724 aaKnown RBP12.7□□□□□ -0.38
LINC01001-203ENST00000607448 DOCK1Q14185 1865 aa12.69□□□□□ -0.38
LINC01001-203ENST00000607448 CYP2E1P05181 493 aaPredicted RBP12.69□□□□□ -0.38
LINC01001-203ENST00000607448 TTC39AQ5SRH9 613 aa12.69□□□□□ -0.38
LINC01001-203ENST00000607448 CASC1Q6TDU7 716 aa12.69□□□□□ -0.38
LINC01001-203ENST00000607448 ZKSCAN4Q969J2 545 aaPredicted RBP12.69□□□□□ -0.38
LINC01001-203ENST00000607448 IL1RAPL2Q9NP60 686 aa12.69□□□□□ -0.38
LINC01001-203ENST00000607448 PTPRFP10586 1907 aa12.69□□□□□ -0.38
LINC01001-203ENST00000607448 HTTP42858 3142 aa12.69□□□□□ -0.38
LINC01001-203ENST00000607448 ATRNL1Q5VV63 1379 aa12.69□□□□□ -0.38
LINC01001-203ENST00000607448 APBB1O00213 710 aa12.69□□□□□ -0.38
LINC01001-203ENST00000607448 IGF2BP3O00425 579 aaKnown RBP eCLIP12.69□□□□□ -0.38
LINC01001-203ENST00000607448 WDHD1O75717 1129 aaPredicted RBP12.69□□□□□ -0.38
LINC01001-203ENST00000607448 UQCRFS1P1P0C7P4 283 aa12.69□□□□□ -0.38
LINC01001-203ENST00000607448 ZBTB48P10074 688 aaPredicted RBP12.69□□□□□ -0.38
LINC01001-203ENST00000607448 ZAP70P43403 619 aa12.69□□□□□ -0.38
LINC01001-203ENST00000607448 RHBDL3P58872 404 aa12.69□□□□□ -0.38
LINC01001-203ENST00000607448 SH3BP5LQ7L8J4 393 aa12.69□□□□□ -0.38
LINC01001-203ENST00000607448 OPTNQ96CV9 577 aa12.69□□□□□ -0.38
LINC01001-203ENST00000607448 FAM163AQ96GL9 167 aaPredicted RBP12.69□□□□□ -0.38
LINC01001-203ENST00000607448 KIF2CQ99661 725 aa12.69□□□□□ -0.38
LINC01001-203ENST00000607448 SNCAIPQ9Y6H5 919 aa12.69□□□□□ -0.38
LINC01001-203ENST00000607448 BRCA2P51587 3418 aa12.68□□□□□ -0.38
LINC01001-203ENST00000607448 GPR75-ASB3A0A0A6YYF3 556 aa12.68□□□□□ -0.38
LINC01001-203ENST00000607448 UNCXA6NJT0 531 aa12.68□□□□□ -0.38
LINC01001-203ENST00000607448 K7ELQ4 463 aaPredicted RBP12.68□□□□□ -0.38
LINC01001-203ENST00000607448 INPP5BP32019 993 aa12.68□□□□□ -0.38
LINC01001-203ENST00000607448 PICALMQ13492 652 aa12.68□□□□□ -0.38
LINC01001-203ENST00000607448 RABEP1Q15276 862 aa12.68□□□□□ -0.38
LINC01001-203ENST00000607448 CCDC158Q5M9N0 1113 aa12.68□□□□□ -0.38
LINC01001-203ENST00000607448 SPTY2D1Q68D10 685 aaPredicted RBP12.68□□□□□ -0.38
LINC01001-203ENST00000607448 ADGRA1Q86SQ6 560 aa12.68□□□□□ -0.38
LINC01001-203ENST00000607448 REM2Q8IYK8 340 aaPredicted RBP12.68□□□□□ -0.38
LINC01001-203ENST00000607448 RHPN1Q8TCX5 695 aa12.68□□□□□ -0.38
LINC01001-203ENST00000607448 WRNIP1Q96S55 665 aa12.68□□□□□ -0.38
LINC01001-203ENST00000607448 PTPN18Q99952 460 aa12.68□□□□□ -0.38
LINC01001-203ENST00000607448 IDI2Q9BXS1 227 aa12.68□□□□□ -0.38
LINC01001-203ENST00000607448 RAI14Q9P0K7 980 aa12.68□□□□□ -0.38
LINC01001-203ENST00000607448 ZSWIM8A7E2V4 1837 aa12.67□□□□□ -0.38
LINC01001-203ENST00000607448 MYH1P12882 1939 aa12.67□□□□□ -0.38
LINC01001-203ENST00000607448 MYH7P12883 1935 aa12.67□□□□□ -0.38
LINC01001-203ENST00000607448 DDTLA6NHG4 134 aaPredicted RBP12.67□□□□□ -0.38
LINC01001-203ENST00000607448 GSPT1P15170 499 aaKnown RBP12.67□□□□□ -0.38
LINC01001-203ENST00000607448 MAP3K9P80192 1104 aa12.67□□□□□ -0.38
LINC01001-203ENST00000607448 SREBF2Q12772 1141 aa12.67□□□□□ -0.38
LINC01001-203ENST00000607448 AACSQ86V21 672 aa12.67□□□□□ -0.38
LINC01001-203ENST00000607448 IFNL1Q8IU54 200 aa12.67□□□□□ -0.38
LINC01001-203ENST00000607448 OTUD5Q96G74 571 aa12.67□□□□□ -0.38
LINC01001-203ENST00000607448 GBP4Q96PP9 640 aa12.67□□□□□ -0.38
LINC01001-203ENST00000607448 PIH1D3Q9NQM4 214 aaKnown RBP12.67□□□□□ -0.38
LINC01001-203ENST00000607448 ISY1Q9ULR0 285 aaKnown RBP12.67□□□□□ -0.38
LINC01001-203ENST00000607448 SPRYD3Q8NCJ5 442 aa12.66□□□□□ -0.38
LINC01001-203ENST00000607448 IL27Q8NEV9 243 aa12.66□□□□□ -0.38
LINC01001-203ENST00000607448 ABHD8Q96I13 439 aa12.66□□□□□ -0.38
LINC01001-203ENST00000607448 MS4A4AQ96JQ5 239 aa12.66□□□□□ -0.38
LINC01001-203ENST00000607448 ZNF512BQ96KM6 892 aaPredicted RBP12.66□□□□□ -0.38
LINC01001-203ENST00000607448 MCOLN1Q9GZU1 580 aa12.66□□□□□ -0.38
LINC01001-203ENST00000607448 OSBPL3Q9H4L5 887 aa12.66□□□□□ -0.38
LINC01001-203ENST00000607448 LRP2BPQ9P2M1 347 aa12.66□□□□□ -0.38
LINC01001-203ENST00000607448 MANSC4A6NHS7 340 aaPredicted RBP12.65□□□□□ -0.38
LINC01001-203ENST00000607448 ERC1Q8IUD2 1116 aa12.65□□□□□ -0.38
LINC01001-203ENST00000607448 ZNF296Q8WUU4 475 aaPredicted RBP12.65□□□□□ -0.38
LINC01001-203ENST00000607448 CSADQ9Y600 493 aa12.65□□□□□ -0.38
LINC01001-203ENST00000607448 DDX60LQ5H9U9 1706 aaKnown RBP12.65□□□□□ -0.38
LINC01001-203ENST00000607448 SPDYE5A6NIY4 337 aa12.64□□□□□ -0.39
LINC01001-203ENST00000607448 ENTPD3O75355 529 aa12.64□□□□□ -0.39
LINC01001-203ENST00000607448 DGKZQ13574 1117 aa12.64□□□□□ -0.39
LINC01001-203ENST00000607448 RAB3GAP1Q15042 981 aa12.64□□□□□ -0.39
LINC01001-203ENST00000607448 SKOR2Q2VWA4 1001 aaPredicted RBP12.64□□□□□ -0.39
LINC01001-203ENST00000607448 DCAF15Q66K64 600 aa12.64□□□□□ -0.39
LINC01001-203ENST00000607448 SLF2Q8IX21 1173 aa12.64□□□□□ -0.39
LINC01001-203ENST00000607448 SH3RF3Q8TEJ3 882 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms