RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 SUPT16HQ9Y5B9 1047 aaKnown RBP20.15■□□□□ 0.82
LINC00240-203ENST00000606878 MANSC4A6NHS7 340 aaPredicted RBP20.14■□□□□ 0.81
LINC00240-203ENST00000606878 TRPA1O75762 1119 aa20.14■□□□□ 0.81
LINC00240-203ENST00000606878 MAGEB6Q8N7X4 407 aa20.14■□□□□ 0.81
LINC00240-203ENST00000606878 WRNIP1Q96S55 665 aa20.14■□□□□ 0.81
LINC00240-203ENST00000606878 DNAJC2Q99543 621 aaKnown RBP20.14■□□□□ 0.81
LINC00240-203ENST00000606878 BOLA2Q9H3K6 86 aa20.14■□□□□ 0.81
LINC00240-203ENST00000606878 DDX4Q9NQI0 724 aaKnown RBP20.14■□□□□ 0.81
LINC00240-203ENST00000606878 SAGE1Q9NXZ1 904 aa20.14■□□□□ 0.81
LINC00240-203ENST00000606878 TSKSQ9UJT2 592 aa20.14■□□□□ 0.81
LINC00240-203ENST00000606878 MYH2Q9UKX2 1941 aa20.14■□□□□ 0.81
LINC00240-203ENST00000606878 VGLL4Q14135 290 aa20.13■□□□□ 0.81
LINC00240-203ENST00000606878 SH3RF3Q8TEJ3 882 aaPredicted RBP20.13■□□□□ 0.81
LINC00240-203ENST00000606878 GOLIM4O00461 696 aa20.12■□□□□ 0.81
LINC00240-203ENST00000606878 SH3BP5LQ7L8J4 393 aa20.12■□□□□ 0.81
LINC00240-203ENST00000606878 ADGRA1Q86SQ6 560 aa20.12■□□□□ 0.81
LINC00240-203ENST00000606878 CERS3Q8IU89 383 aa20.12■□□□□ 0.81
LINC00240-203ENST00000606878 ZKSCAN4Q969J2 545 aaPredicted RBP20.12■□□□□ 0.81
LINC00240-203ENST00000606878 OPTNQ96CV9 577 aa20.12■□□□□ 0.81
LINC00240-203ENST00000606878 ECHDC1Q9NTX5 307 aa20.12■□□□□ 0.81
LINC00240-203ENST00000606878 ZBTB47Q9UFB7 747 aaPredicted RBP20.12■□□□□ 0.81
LINC00240-203ENST00000606878 ZNF112Q9UJU3 913 aa20.12■□□□□ 0.81
LINC00240-203ENST00000606878 DDTLA6NHG4 134 aaPredicted RBP20.11■□□□□ 0.81
LINC00240-203ENST00000606878 SLC9C2Q5TAH2 1124 aa20.11■□□□□ 0.81
LINC00240-203ENST00000606878 ERO1BQ86YB8 467 aa20.11■□□□□ 0.81
LINC00240-203ENST00000606878 GPATCH3Q96I76 525 aa20.11■□□□□ 0.81
LINC00240-203ENST00000606878 HAUS7Q99871 368 aa20.11■□□□□ 0.81
LINC00240-203ENST00000606878 PAG1Q9NWQ8 432 aa20.11■□□□□ 0.81
LINC00240-203ENST00000606878 AKAP11Q9UKA4 1901 aa20.11■□□□□ 0.81
LINC00240-203ENST00000606878 MAP3K10Q02779 954 aa20.1■□□□□ 0.81
LINC00240-203ENST00000606878 HDAC1Q13547 482 aaPredicted RBP20.1■□□□□ 0.81
LINC00240-203ENST00000606878 THSD7BQ9C0I4 1608 aa20.09■□□□□ 0.81
LINC00240-203ENST00000606878 ALDH1A1P00352 501 aa20.09■□□□□ 0.81
LINC00240-203ENST00000606878 INPP5BP32019 993 aa20.09■□□□□ 0.81
LINC00240-203ENST00000606878 GJA5P36382 358 aa20.09■□□□□ 0.81
LINC00240-203ENST00000606878 OTUD7BQ6GQQ9 843 aa20.09■□□□□ 0.81
LINC00240-203ENST00000606878 MIGA1Q8NAN2 632 aa20.09■□□□□ 0.81
LINC00240-203ENST00000606878 TGFBRAP1Q8WUH2 860 aa20.09■□□□□ 0.81
LINC00240-203ENST00000606878 GCC1Q96CN9 775 aa20.09■□□□□ 0.81
LINC00240-203ENST00000606878 OSBPL5Q9H0X9 879 aaPredicted RBP20.09■□□□□ 0.81
LINC00240-203ENST00000606878 DHX36Q9H2U1 1008 aaKnown RBP20.09■□□□□ 0.81
LINC00240-203ENST00000606878 RFX7Q2KHR2 1363 aa20.08■□□□□ 0.81
LINC00240-203ENST00000606878 SPDYE5A6NIY4 337 aa20.08■□□□□ 0.81
LINC00240-203ENST00000606878 TBC1D12O60347 775 aa20.08■□□□□ 0.81
LINC00240-203ENST00000606878 GTF2A2P52657 109 aa20.08■□□□□ 0.81
LINC00240-203ENST00000606878 DYNLL1P63167 89 aaKnown RBP20.08■□□□□ 0.81
LINC00240-203ENST00000606878 EXOC6Q8TAG9 804 aa20.08■□□□□ 0.81
LINC00240-203ENST00000606878 CNKSR2Q8WXI2 1034 aa20.08■□□□□ 0.81
LINC00240-203ENST00000606878 EDC3Q96F86 508 aaKnown RBP20.08■□□□□ 0.81
LINC00240-203ENST00000606878 OTUD5Q96G74 571 aa20.08■□□□□ 0.81
LINC00240-203ENST00000606878 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.08■□□□□ 0.81
LINC00240-203ENST00000606878 RWDD1Q9H446 243 aaPredicted RBP20.08■□□□□ 0.81
LINC00240-203ENST00000606878 PI4KBQ9UBF8 816 aa20.08■□□□□ 0.81
LINC00240-203ENST00000606878 SNCAIPQ9Y6H5 919 aa20.08■□□□□ 0.81
LINC00240-203ENST00000606878 PDE6AP16499 860 aa20.07■□□□□ 0.8
LINC00240-203ENST00000606878 PPATQ06203 517 aa20.07■□□□□ 0.8
LINC00240-203ENST00000606878 ANKRD45Q5TZF3 282 aa20.07■□□□□ 0.8
LINC00240-203ENST00000606878 IFNL1Q8IU54 200 aa20.07■□□□□ 0.8
LINC00240-203ENST00000606878 MAPKAPK5Q8IW41 473 aa20.07■□□□□ 0.8
LINC00240-203ENST00000606878 TNS4Q8IZW8 715 aa20.07■□□□□ 0.8
LINC00240-203ENST00000606878 MAGEB6P1A0A0J9YX57 407 aa20.06■□□□□ 0.8
LINC00240-203ENST00000606878 TESPA1A2RU30 521 aaPredicted RBP20.06■□□□□ 0.8
LINC00240-203ENST00000606878 PHF20L1A8MW92 1017 aa20.06■□□□□ 0.8
LINC00240-203ENST00000606878 TBC1D8O95759 1140 aa20.06■□□□□ 0.8
LINC00240-203ENST00000606878 USP5P45974 858 aa20.06■□□□□ 0.8
LINC00240-203ENST00000606878 FOXP4Q8IVH2 680 aaPredicted RBP20.06■□□□□ 0.8
LINC00240-203ENST00000606878 MS4A4AQ96JQ5 239 aa20.06■□□□□ 0.8
LINC00240-203ENST00000606878 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.06■□□□□ 0.8
LINC00240-203ENST00000606878 ATRNL1Q5VV63 1379 aa20.06■□□□□ 0.8
LINC00240-203ENST00000606878 AK9Q5TCS8 1911 aa20.06■□□□□ 0.8
LINC00240-203ENST00000606878 ZNF532Q9HCE3 1301 aa20.05■□□□□ 0.8
LINC00240-203ENST00000606878 CTNND1O60716 968 aaKnown RBP20.05■□□□□ 0.8
LINC00240-203ENST00000606878 PPIL2Q13356 520 aa20.05■□□□□ 0.8
LINC00240-203ENST00000606878 NOL9Q5SY16 702 aaKnown RBP20.05■□□□□ 0.8
LINC00240-203ENST00000606878 ZSCAN25Q6NSZ9 544 aa20.05■□□□□ 0.8
LINC00240-203ENST00000606878 PICK1Q9NRD5 415 aa20.05■□□□□ 0.8
LINC00240-203ENST00000606878 IRF6O14896 467 aa20.04■□□□□ 0.8
LINC00240-203ENST00000606878 CETPP11597 493 aa20.04■□□□□ 0.8
LINC00240-203ENST00000606878 SNAPC2Q13487 334 aa20.04■□□□□ 0.8
LINC00240-203ENST00000606878 HERC5Q9UII4 1024 aaKnown RBP20.04■□□□□ 0.8
LINC00240-203ENST00000606878 FLT1P17948 1338 aa20.03■□□□□ 0.8
LINC00240-203ENST00000606878 CCL15-CCL14A0A0B4J2E2 113 aa20.03■□□□□ 0.8
LINC00240-203ENST00000606878 ERC2O15083 957 aa20.03■□□□□ 0.8
LINC00240-203ENST00000606878 CCL15Q16663 113 aa20.03■□□□□ 0.8
LINC00240-203ENST00000606878 SCYL3Q8IZE3 742 aa20.03■□□□□ 0.8
LINC00240-203ENST00000606878 RIOK1Q9BRS2 568 aaKnown RBP20.03■□□□□ 0.8
LINC00240-203ENST00000606878 PALD1Q9ULE6 856 aa20.03■□□□□ 0.8
LINC00240-203ENST00000606878 TTC41PQ6P2S7 1318 aa20.02■□□□□ 0.8
LINC00240-203ENST00000606878 TCRBV5S4A2TA0A5A2 114 aa20.02■□□□□ 0.8
LINC00240-203ENST00000606878 IGF2BP3O00425 579 aaKnown RBP eCLIP20.02■□□□□ 0.8
LINC00240-203ENST00000606878 HLA-DOAP06340 250 aa20.02■□□□□ 0.8
LINC00240-203ENST00000606878 SLURP2P0DP57 97 aa20.02■□□□□ 0.8
LINC00240-203ENST00000606878 ADD2P35612 726 aa20.02■□□□□ 0.8
LINC00240-203ENST00000606878 UBE3CQ15386 1083 aa20.02■□□□□ 0.8
LINC00240-203ENST00000606878 BRI3BPQ8WY22 251 aa20.02■□□□□ 0.8
LINC00240-203ENST00000606878 PTPN18Q99952 460 aa20.02■□□□□ 0.8
LINC00240-203ENST00000606878 CFHR5Q9BXR6 569 aa20.02■□□□□ 0.8
LINC00240-203ENST00000606878 TRIM34Q9BYJ4 488 aa20.02■□□□□ 0.8
LINC00240-203ENST00000606878 CRNKL1Q9BZJ0 848 aaKnown RBP20.02■□□□□ 0.8
LINC00240-203ENST00000606878 SAP30BPQ9UHR5 308 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms