RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 SOX10P56693 466 aa16.42■□□□□ 0.22
CTSA-213ENST00000606782 RHBDL3P58872 404 aa16.42■□□□□ 0.22
CTSA-213ENST00000606782 TAF1CQ15572 869 aaPredicted RBP16.42■□□□□ 0.22
CTSA-213ENST00000606782 GORABQ5T7V8 394 aa16.42■□□□□ 0.22
CTSA-213ENST00000606782 SH3BP5LQ7L8J4 393 aa16.42■□□□□ 0.22
CTSA-213ENST00000606782 NSUN4Q96CB9 384 aaKnown RBP16.42■□□□□ 0.22
CTSA-213ENST00000606782 TRIM17Q9Y577 477 aa16.42■□□□□ 0.22
CTSA-213ENST00000606782 AK9Q5TCS8 1911 aa16.41■□□□□ 0.22
CTSA-213ENST00000606782 BTBD19C9JJ37 291 aa16.41■□□□□ 0.22
CTSA-213ENST00000606782 IGSF3O75054 1194 aa16.41■□□□□ 0.22
CTSA-213ENST00000606782 LDHCP07864 332 aa16.41■□□□□ 0.22
CTSA-213ENST00000606782 BTDP43251 543 aa16.41■□□□□ 0.22
CTSA-213ENST00000606782 GSTO1P78417 241 aa16.41■□□□□ 0.22
CTSA-213ENST00000606782 CAP1Q01518 475 aa16.41■□□□□ 0.22
CTSA-213ENST00000606782 TNNI3KQ59H18 835 aa16.41■□□□□ 0.22
CTSA-213ENST00000606782 PI16Q6UXB8 463 aa16.41■□□□□ 0.22
CTSA-213ENST00000606782 CD99L2Q8TCZ2 262 aa16.41■□□□□ 0.22
CTSA-213ENST00000606782 ZNF512BQ96KM6 892 aaPredicted RBP16.41■□□□□ 0.22
CTSA-213ENST00000606782 COG6Q9Y2V7 657 aa16.41■□□□□ 0.22
CTSA-213ENST00000606782 FPGT-TNNI3KV9GXZ4 949 aa16.41■□□□□ 0.22
CTSA-213ENST00000606782 TLR2O60603 784 aa16.4■□□□□ 0.22
CTSA-213ENST00000606782 TBC1D9Q6ZT07 1266 aa16.4■□□□□ 0.22
CTSA-213ENST00000606782 ITPRIPQ8IWB1 547 aa16.4■□□□□ 0.22
CTSA-213ENST00000606782 EFCC1Q9HA90 598 aa16.4■□□□□ 0.22
CTSA-213ENST00000606782 DDX4Q9NQI0 724 aaKnown RBP16.4■□□□□ 0.22
CTSA-213ENST00000606782 PTPN22Q9Y2R2 807 aa16.4■□□□□ 0.22
CTSA-213ENST00000606782 DDTLA6NHG4 134 aaPredicted RBP16.39■□□□□ 0.21
CTSA-213ENST00000606782 CXCL11O14625 94 aa16.39■□□□□ 0.21
CTSA-213ENST00000606782 SURF6O75683 361 aaKnown RBP16.39■□□□□ 0.21
CTSA-213ENST00000606782 MOGSQ13724 837 aa16.39■□□□□ 0.21
CTSA-213ENST00000606782 ANKRD23Q86SG2 305 aa16.39■□□□□ 0.21
CTSA-213ENST00000606782 DBNDD2Q9BQY9 259 aa16.39■□□□□ 0.21
CTSA-213ENST00000606782 C1orf115Q9H7X2 142 aa16.39■□□□□ 0.21
CTSA-213ENST00000606782 KIAA0100Q14667 2235 aaKnown RBP16.38■□□□□ 0.21
CTSA-213ENST00000606782 COL2A1P02458 1487 aaPredicted RBP16.38■□□□□ 0.21
CTSA-213ENST00000606782 TBC1D12O60347 775 aa16.38■□□□□ 0.21
CTSA-213ENST00000606782 ARHGEF6Q15052 776 aa16.38■□□□□ 0.21
CTSA-213ENST00000606782 DDX19BQ9UMR2 479 aa16.38■□□□□ 0.21
CTSA-213ENST00000606782 DOCK2Q92608 1830 aa16.38■□□□□ 0.21
CTSA-213ENST00000606782 CTNND1O60716 968 aaKnown RBP16.37■□□□□ 0.21
CTSA-213ENST00000606782 CCDC158Q5M9N0 1113 aa16.37■□□□□ 0.21
CTSA-213ENST00000606782 CEP85Q6P2H3 762 aa16.37■□□□□ 0.21
CTSA-213ENST00000606782 SCYL3Q8IZE3 742 aa16.37■□□□□ 0.21
CTSA-213ENST00000606782 ARMC5Q96C12 935 aa16.37■□□□□ 0.21
CTSA-213ENST00000606782 ZBTB40Q9NUA8 1239 aa16.37■□□□□ 0.21
CTSA-213ENST00000606782 PTPRAP18433 802 aa16.36■□□□□ 0.21
CTSA-213ENST00000606782 PPP4CP60510 307 aa16.36■□□□□ 0.21
CTSA-213ENST00000606782 OS9Q13438 667 aaPredicted RBP16.36■□□□□ 0.21
CTSA-213ENST00000606782 C17orf99Q6UX52 265 aa16.36■□□□□ 0.21
CTSA-213ENST00000606782 ZSCAN29Q8IWY8 852 aaPredicted RBP16.36■□□□□ 0.21
CTSA-213ENST00000606782 CHMP4BQ9H444 224 aaKnown RBP16.36■□□□□ 0.21
CTSA-213ENST00000606782 RAI14Q9P0K7 980 aa16.36■□□□□ 0.21
CTSA-213ENST00000606782 LRP2BPQ9P2M1 347 aa16.36■□□□□ 0.21
CTSA-213ENST00000606782 AFG3L2Q9Y4W6 797 aa16.36■□□□□ 0.21
CTSA-213ENST00000606782 ADGRA2Q96PE1 1338 aa16.36■□□□□ 0.21
CTSA-213ENST00000606782 HTTP42858 3142 aa16.36■□□□□ 0.21
CTSA-213ENST00000606782 TNRC18O15417 2968 aaPredicted RBP16.35■□□□□ 0.21
CTSA-213ENST00000606782 GNRH1P01148 92 aa16.35■□□□□ 0.21
CTSA-213ENST00000606782 CYP2E1P05181 493 aaPredicted RBP16.35■□□□□ 0.21
CTSA-213ENST00000606782 PICALMQ13492 652 aa16.35■□□□□ 0.21
CTSA-213ENST00000606782 TTC39AQ5SRH9 613 aa16.35■□□□□ 0.21
CTSA-213ENST00000606782 EAF2Q96CJ1 260 aaPredicted RBP16.35■□□□□ 0.21
CTSA-213ENST00000606782 CRBNQ96SW2 442 aa16.35■□□□□ 0.21
CTSA-213ENST00000606782 PICK1Q9NRD5 415 aa16.35■□□□□ 0.21
CTSA-213ENST00000606782 DBNLQ9UJU6 430 aaKnown RBP16.35■□□□□ 0.21
CTSA-213ENST00000606782 ZHX2Q9Y6X8 837 aa16.35■□□□□ 0.21
CTSA-213ENST00000606782 A0A0G2JLL6 359 aaPredicted RBP16.34■□□□□ 0.21
CTSA-213ENST00000606782 PDHXO00330 501 aa16.34■□□□□ 0.21
CTSA-213ENST00000606782 LACTBP83111 547 aaPredicted RBP16.34■□□□□ 0.21
CTSA-213ENST00000606782 GPAT2Q6NUI2 795 aa16.34■□□□□ 0.21
CTSA-213ENST00000606782 PRRT2Q7Z6L0 340 aaPredicted RBP16.34■□□□□ 0.21
CTSA-213ENST00000606782 OSBPL5Q9H0X9 879 aaPredicted RBP16.34■□□□□ 0.21
CTSA-213ENST00000606782 SNRKQ9NRH2 765 aa16.34■□□□□ 0.21
CTSA-213ENST00000606782 SLURP2P0DP57 97 aa16.33■□□□□ 0.2
CTSA-213ENST00000606782 PLCG2P16885 1265 aa16.33■□□□□ 0.2
CTSA-213ENST00000606782 NAA16Q6N069 864 aaPredicted RBP16.33■□□□□ 0.2
CTSA-213ENST00000606782 FASTKD5Q7L8L6 764 aaKnown RBP16.33■□□□□ 0.2
CTSA-213ENST00000606782 ERC1Q8IUD2 1116 aa16.33■□□□□ 0.2
CTSA-213ENST00000606782 SLC45A1Q9Y2W3 748 aa16.33■□□□□ 0.2
CTSA-213ENST00000606782 BAG3O95817 575 aa16.32■□□□□ 0.2
CTSA-213ENST00000606782 ZAP70P43403 619 aa16.32■□□□□ 0.2
CTSA-213ENST00000606782 PRMT2P55345 433 aa16.32■□□□□ 0.2
CTSA-213ENST00000606782 KIF22Q14807 665 aa16.32■□□□□ 0.2
CTSA-213ENST00000606782 TMED8Q6PL24 325 aaPredicted RBP16.32■□□□□ 0.2
CTSA-213ENST00000606782 TEX11Q8IYF3 940 aa16.32■□□□□ 0.2
CTSA-213ENST00000606782 CCDC8Q9H0W5 538 aaPredicted RBP16.32■□□□□ 0.2
CTSA-213ENST00000606782 DOCK1Q14185 1865 aa16.31■□□□□ 0.2
CTSA-213ENST00000606782 PHIPQ8WWQ0 1821 aa16.31■□□□□ 0.2
CTSA-213ENST00000606782 BCRP11274 1271 aa16.31■□□□□ 0.2
CTSA-213ENST00000606782 AAMPQ13685 434 aa16.31■□□□□ 0.2
CTSA-213ENST00000606782 ADGRA1Q86SQ6 560 aa16.31■□□□□ 0.2
CTSA-213ENST00000606782 METTL16Q86W50 562 aaKnown RBP16.31■□□□□ 0.2
CTSA-213ENST00000606782 RPAP2Q8IXW5 612 aaPredicted RBP16.31■□□□□ 0.2
CTSA-213ENST00000606782 SH3RF3Q8TEJ3 882 aaPredicted RBP16.31■□□□□ 0.2
CTSA-213ENST00000606782 ZNF333Q96JL9 665 aa16.31■□□□□ 0.2
CTSA-213ENST00000606782 PARK7Q99497 189 aaKnown RBP16.31■□□□□ 0.2
CTSA-213ENST00000606782 NOL10Q9BSC4 688 aaKnown RBP16.31■□□□□ 0.2
CTSA-213ENST00000606782 ARHGAP39Q9C0H5 1083 aa16.31■□□□□ 0.2
CTSA-213ENST00000606782 DHX36Q9H2U1 1008 aaKnown RBP16.31■□□□□ 0.2
CTSA-213ENST00000606782 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms