RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 EVI5LQ96CN4 794 aa17.24■□□□□ 0.35
CTSA-211ENST00000606066 PPP4R2Q9NY27 417 aa17.24■□□□□ 0.35
CTSA-211ENST00000606066 ENTPD3O75355 529 aa17.23■□□□□ 0.35
CTSA-211ENST00000606066 RHBDL3P58872 404 aa17.23■□□□□ 0.35
CTSA-211ENST00000606066 PRAMEF18Q5VWM3 479 aa17.23■□□□□ 0.35
CTSA-211ENST00000606066 ADGRA1Q86SQ6 560 aa17.23■□□□□ 0.35
CTSA-211ENST00000606066 TEX11Q8IYF3 940 aa17.23■□□□□ 0.35
CTSA-211ENST00000606066 HOOK2Q96ED9 719 aa17.23■□□□□ 0.35
CTSA-211ENST00000606066 MAGEB6P1A0A0J9YX57 407 aa17.22■□□□□ 0.35
CTSA-211ENST00000606066 TCRBV5S4A2TA0A5A2 114 aa17.22■□□□□ 0.35
CTSA-211ENST00000606066 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
CTSA-211ENST00000606066 FKBP1BP68106 108 aa17.22■□□□□ 0.35
CTSA-211ENST00000606066 KIF23Q02241 960 aaPredicted RBP17.22■□□□□ 0.35
CTSA-211ENST00000606066 NFIAQ12857 509 aa17.22■□□□□ 0.35
CTSA-211ENST00000606066 TICAM2Q86XR7 235 aa17.22■□□□□ 0.35
CTSA-211ENST00000606066 REM2Q8IYK8 340 aaPredicted RBP17.22■□□□□ 0.35
CTSA-211ENST00000606066 MIGA1Q8NAN2 632 aa17.22■□□□□ 0.35
CTSA-211ENST00000606066 FSD1Q9BTV5 496 aa17.22■□□□□ 0.35
CTSA-211ENST00000606066 TMEM39BQ9GZU3 492 aa17.22■□□□□ 0.35
CTSA-211ENST00000606066 TRIM6-TRIM34B2RNG4 842 aa17.21■□□□□ 0.35
CTSA-211ENST00000606066 RNF113AO15541 343 aaKnown RBP17.21■□□□□ 0.35
CTSA-211ENST00000606066 WDHD1O75717 1129 aaPredicted RBP17.21■□□□□ 0.35
CTSA-211ENST00000606066 PDE4AP27815 886 aa17.21■□□□□ 0.35
CTSA-211ENST00000606066 RGS3P49796 1198 aa17.21■□□□□ 0.35
CTSA-211ENST00000606066 ZNF157P51786 506 aaPredicted RBP17.21■□□□□ 0.35
CTSA-211ENST00000606066 TCP10Q12799 353 aa17.21■□□□□ 0.35
CTSA-211ENST00000606066 SH3RF3Q8TEJ3 882 aaPredicted RBP17.21■□□□□ 0.35
CTSA-211ENST00000606066 FAM198AQ9UFP1 575 aa17.21■□□□□ 0.35
CTSA-211ENST00000606066 PPP1R12BO60237 982 aaPredicted RBP17.2■□□□□ 0.34
CTSA-211ENST00000606066 PICALMQ13492 652 aa17.2■□□□□ 0.34
CTSA-211ENST00000606066 NBPF12Q5TAG4 269 aaPredicted RBP17.2■□□□□ 0.34
CTSA-211ENST00000606066 TEPSINQ96N21 525 aa17.2■□□□□ 0.34
CTSA-211ENST00000606066 CSRNP1Q96S65 589 aa17.2■□□□□ 0.34
CTSA-211ENST00000606066 RNF186Q9NXI6 227 aa17.2■□□□□ 0.34
CTSA-211ENST00000606066 RPAP1Q9BWH6 1393 aaPredicted RBP17.19■□□□□ 0.34
CTSA-211ENST00000606066 USP5P45974 858 aa17.19■□□□□ 0.34
CTSA-211ENST00000606066 DYNLL1P63167 89 aaKnown RBP17.19■□□□□ 0.34
CTSA-211ENST00000606066 TTLL12Q14166 644 aaPredicted RBP17.19■□□□□ 0.34
CTSA-211ENST00000606066 ARMC9Q7Z3E5 817 aa17.19■□□□□ 0.34
CTSA-211ENST00000606066 ZSCAN29Q8IWY8 852 aaPredicted RBP17.19■□□□□ 0.34
CTSA-211ENST00000606066 TGFBRAP1Q8WUH2 860 aa17.19■□□□□ 0.34
CTSA-211ENST00000606066 APPBP2Q92624 585 aa17.19■□□□□ 0.34
CTSA-211ENST00000606066 RILPL2Q969X0 211 aa17.19■□□□□ 0.34
CTSA-211ENST00000606066 RIOK1Q9BRS2 568 aaKnown RBP17.19■□□□□ 0.34
CTSA-211ENST00000606066 MAST2Q6P0Q8 1798 aa17.19■□□□□ 0.34
CTSA-211ENST00000606066 RFX7Q2KHR2 1363 aa17.18■□□□□ 0.34
CTSA-211ENST00000606066 MYH2Q9UKX2 1941 aa17.18■□□□□ 0.34
CTSA-211ENST00000606066 SLC10A3P09131 477 aa17.18■□□□□ 0.34
CTSA-211ENST00000606066 DCAF15Q66K64 600 aa17.18■□□□□ 0.34
CTSA-211ENST00000606066 CRNKL1Q9BZJ0 848 aaKnown RBP17.18■□□□□ 0.34
CTSA-211ENST00000606066 OSBPL5Q9H0X9 879 aaPredicted RBP17.18■□□□□ 0.34
CTSA-211ENST00000606066 DDX4Q9NQI0 724 aaKnown RBP17.18■□□□□ 0.34
CTSA-211ENST00000606066 ECM29Q5VYK3 1845 aa17.17■□□□□ 0.34
CTSA-211ENST00000606066 TRPA1O75762 1119 aa17.17■□□□□ 0.34
CTSA-211ENST00000606066 TRPM7Q96QT4 1865 aa17.17■□□□□ 0.34
CTSA-211ENST00000606066 DHX36Q9H2U1 1008 aaKnown RBP17.17■□□□□ 0.34
CTSA-211ENST00000606066 MBD4O95243 580 aa17.16■□□□□ 0.34
CTSA-211ENST00000606066 IREB2P48200 963 aaKnown RBP17.16■□□□□ 0.34
CTSA-211ENST00000606066 PRKG1Q13976 671 aa17.16■□□□□ 0.34
CTSA-211ENST00000606066 SLFNL1Q499Z3 407 aa17.16■□□□□ 0.34
CTSA-211ENST00000606066 TTC22Q5TAA0 569 aa17.16■□□□□ 0.34
CTSA-211ENST00000606066 MAPKAPK5Q8IW41 473 aa17.16■□□□□ 0.34
CTSA-211ENST00000606066 ZFPM1Q8IX07 1006 aa17.16■□□□□ 0.34
CTSA-211ENST00000606066 PUS7LQ9H0K6 701 aaKnown RBP17.16■□□□□ 0.34
CTSA-211ENST00000606066 ANGEL1Q9UNK9 670 aaKnown RBP17.16■□□□□ 0.34
CTSA-211ENST00000606066 DOCK2Q92608 1830 aa17.16■□□□□ 0.34
CTSA-211ENST00000606066 FLT1P17948 1338 aa17.16■□□□□ 0.34
CTSA-211ENST00000606066 UNCXA6NJT0 531 aa17.15■□□□□ 0.34
CTSA-211ENST00000606066 CHGBP05060 677 aa17.15■□□□□ 0.34
CTSA-211ENST00000606066 MAP3K11Q16584 847 aa17.15■□□□□ 0.34
CTSA-211ENST00000606066 CDAN1Q8IWY9 1227 aa17.15■□□□□ 0.34
CTSA-211ENST00000606066 LCORLQ8N3X6 602 aa17.15■□□□□ 0.34
CTSA-211ENST00000606066 DDRGK1Q96HY6 314 aa17.15■□□□□ 0.34
CTSA-211ENST00000606066 ARMT1Q9H993 441 aa17.15■□□□□ 0.34
CTSA-211ENST00000606066 PCDH10Q9P2E7 1040 aa17.15■□□□□ 0.34
CTSA-211ENST00000606066 ATRNL1Q5VV63 1379 aa17.15■□□□□ 0.34
CTSA-211ENST00000606066 DDTLA6NHG4 134 aaPredicted RBP17.14■□□□□ 0.33
CTSA-211ENST00000606066 HIP1O00291 1037 aa17.14■□□□□ 0.33
CTSA-211ENST00000606066 GNAT2P19087 354 aa17.14■□□□□ 0.33
CTSA-211ENST00000606066 ZMYM1Q5SVZ6 1142 aa17.14■□□□□ 0.33
CTSA-211ENST00000606066 OSBP2Q969R2 916 aa17.14■□□□□ 0.33
CTSA-211ENST00000606066 ZNF341Q9BYN7 854 aa17.14■□□□□ 0.33
CTSA-211ENST00000606066 ATP8A2Q9NTI2 1148 aa17.14■□□□□ 0.33
CTSA-211ENST00000606066 PI4KBQ9UBF8 816 aa17.14■□□□□ 0.33
CTSA-211ENST00000606066 POLR2AP24928 1970 aaKnown RBP17.13■□□□□ 0.33
CTSA-211ENST00000606066 COL2A1P02458 1487 aaPredicted RBP17.13■□□□□ 0.33
CTSA-211ENST00000606066 UBE2Q2LH0YL09 131 aa17.13■□□□□ 0.33
CTSA-211ENST00000606066 USP2O75604 605 aaPredicted RBP17.13■□□□□ 0.33
CTSA-211ENST00000606066 HLA-DOAP06340 250 aa17.13■□□□□ 0.33
CTSA-211ENST00000606066 MOB2Q70IA6 237 aa17.13■□□□□ 0.33
CTSA-211ENST00000606066 SH3BP5LQ7L8J4 393 aa17.13■□□□□ 0.33
CTSA-211ENST00000606066 STRBPQ96SI9 672 aaKnown RBP17.13■□□□□ 0.33
CTSA-211ENST00000606066 HELLSQ9NRZ9 838 aa17.13■□□□□ 0.33
CTSA-211ENST00000606066 SLC4A4Q9Y6R1 1079 aa17.13■□□□□ 0.33
CTSA-211ENST00000606066 SSC5DA1L4H1 1573 aa17.12■□□□□ 0.33
CTSA-211ENST00000606066 GPAA1O43292 621 aa17.12■□□□□ 0.33
CTSA-211ENST00000606066 TBC1D12O60347 775 aa17.12■□□□□ 0.33
CTSA-211ENST00000606066 GSPT1P15170 499 aaKnown RBP17.12■□□□□ 0.33
CTSA-211ENST00000606066 SDSP20132 328 aa17.12■□□□□ 0.33
CTSA-211ENST00000606066 LDLRAD1Q5T700 205 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms