RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 PDE11AQ9HCR9 933 aa10.02□□□□□ -0.81
COMMD3-215ENST00000602574 PDS5BQ9NTI5 1447 aa10.01□□□□□ -0.81
COMMD3-215ENST00000602574 FRMD3A2A2Y4 597 aa10.01□□□□□ -0.81
COMMD3-215ENST00000602574 TBC1D12O60347 775 aa10.01□□□□□ -0.81
COMMD3-215ENST00000602574 PARP1P09874 1014 aaKnown RBP10.01□□□□□ -0.81
COMMD3-215ENST00000602574 MYCLP1P12525 358 aaPredicted RBP10.01□□□□□ -0.81
COMMD3-215ENST00000602574 ENOX2Q16206 610 aaKnown RBP10.01□□□□□ -0.81
COMMD3-215ENST00000602574 EMC10Q5UCC4 262 aa10.01□□□□□ -0.81
COMMD3-215ENST00000602574 SARM1Q6SZW1 724 aa10.01□□□□□ -0.81
COMMD3-215ENST00000602574 BICDL1Q6ZP65 573 aa10.01□□□□□ -0.81
COMMD3-215ENST00000602574 LUZP1Q86V48 1076 aa10.01□□□□□ -0.81
COMMD3-215ENST00000602574 CEP57L1Q8IYX8 460 aa10.01□□□□□ -0.81
COMMD3-215ENST00000602574 CCHCR1Q8TD31 782 aa10.01□□□□□ -0.81
COMMD3-215ENST00000602574 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.01□□□□□ -0.81
COMMD3-215ENST00000602574 USP26Q9BXU7 913 aa10.01□□□□□ -0.81
COMMD3-215ENST00000602574 ZNHIT6Q9NWK9 470 aaKnown RBP10.01□□□□□ -0.81
COMMD3-215ENST00000602574 SH3TC1Q8TE82 1336 aa10.01□□□□□ -0.81
COMMD3-215ENST00000602574 C9orf84Q5VXU9 1444 aa10.01□□□□□ -0.81
COMMD3-215ENST00000602574 ATP9BO43861 1147 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 KDM1AO60341 852 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 NPTXRO95502 500 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 ALOX15P16050 662 aaPredicted RBP10□□□□□ -0.81
COMMD3-215ENST00000602574 EVCP57679 992 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 PKP1Q13835 747 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 CCDC152Q4G0S7 254 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 LEO1Q8WVC0 666 aaPredicted RBP10□□□□□ -0.81
COMMD3-215ENST00000602574 CLIC6Q96NY7 704 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 HOOK1Q9UJC3 728 aaKnown RBP10□□□□□ -0.81
COMMD3-215ENST00000602574 RAB21Q9UL25 225 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 GOLGA6L7A0A1B0GV03 622 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 CFAP69A5D8W1 941 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 USP27XA6NNY8 438 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 TMCC1O94876 653 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 LINGO3P0C6S8 592 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 RPL17P18621 184 aaKnown RBP10□□□□□ -0.81
COMMD3-215ENST00000602574 CCT5P48643 541 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 GNAQP50148 359 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 ARPC4P59998 168 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 POU5F1Q01860 360 aaKnown RBP10□□□□□ -0.81
COMMD3-215ENST00000602574 KCNA1Q09470 495 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 CREB3L3Q68CJ9 461 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 DZIP1Q86YF9 867 aaKnown RBP10□□□□□ -0.81
COMMD3-215ENST00000602574 SYCP3Q8IZU3 236 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 TTC30BQ8N4P2 665 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 OXCT2Q9BYC2 517 aaPredicted RBP10□□□□□ -0.81
COMMD3-215ENST00000602574 YIPF3Q9GZM5 350 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 RABEP2Q9H5N1 569 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 GINM1Q9NU53 330 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 UBAP1Q9NZ09 502 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 NRBP1Q9UHY1 535 aa10□□□□□ -0.81
COMMD3-215ENST00000602574 BZW2Q9Y6E2 419 aaKnown RBP10□□□□□ -0.81
COMMD3-215ENST00000602574 NUP155O75694 1391 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 MSH6P52701 1360 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 TMEM110-MUSTN1A8MSY1 372 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 NPHP1O15259 732 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 TROVE2P10155 538 aaKnown RBP eCLIP9.99□□□□□ -0.81
COMMD3-215ENST00000602574 TCF7P36402 384 aaPredicted RBP9.99□□□□□ -0.81
COMMD3-215ENST00000602574 OXCT1P55809 520 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 GSDMDP57764 484 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 UBE2HP62256 183 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 CCZ1BP86790 482 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 CCZ1P86791 482 aaPredicted RBP9.99□□□□□ -0.81
COMMD3-215ENST00000602574 ATP2B2Q01814 1243 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 TMEM62Q0P6H9 643 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 GNPTABQ3T906 1256 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 NCCRP1Q6ZVX7 275 aaPredicted RBP9.99□□□□□ -0.81
COMMD3-215ENST00000602574 TEX9Q8N6V9 391 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 LRRN4CLQ8ND94 238 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 SLC39A3Q9BRY0 314 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 MOV10L1Q9BXT6 1211 aaKnown RBP9.99□□□□□ -0.81
COMMD3-215ENST00000602574 SPO11Q9Y5K1 396 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 SLC30A1Q9Y6M5 507 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 DUOX2Q9NRD8 1548 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 TARSL2A2RTX5 802 aaKnown RBP9.99□□□□□ -0.81
COMMD3-215ENST00000602574 GOLGA6L4A6NEF3 574 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 ZBED4O75132 1171 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 PEX14O75381 377 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 VIMP08670 466 aaKnown RBP9.99□□□□□ -0.81
COMMD3-215ENST00000602574 CSE1LP55060 971 aaKnown RBP9.99□□□□□ -0.81
COMMD3-215ENST00000602574 BEND6Q5SZJ8 279 aaPredicted RBP9.99□□□□□ -0.81
COMMD3-215ENST00000602574 THOC7Q6I9Y2 204 aaKnown RBP9.99□□□□□ -0.81
COMMD3-215ENST00000602574 SESTD1Q86VW0 696 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 CEP57Q86XR8 500 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 BHMT2Q9H2M3 363 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 RPAP3Q9H6T3 665 aaPredicted RBP9.99□□□□□ -0.81
COMMD3-215ENST00000602574 FAM204AQ9H8W3 233 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 SLC40A1Q9NP59 571 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 WDR35Q9P2L0 1181 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 PCDHB15Q9Y5E8 787 aa9.99□□□□□ -0.81
COMMD3-215ENST00000602574 KDM5AP29375 1690 aaKnown RBP9.99□□□□□ -0.81
COMMD3-215ENST00000602574 GPR75-ASB3A0A0A6YYF3 556 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 NUTM2FA1L443 756 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 BIN1O00499 593 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 CSB-PGBD3P0DP91 1061 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 CA8P35219 290 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 ETF1P62495 437 aaKnown RBP9.98□□□□□ -0.81
COMMD3-215ENST00000602574 CBX3Q13185 183 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 EIF4A2Q14240 407 aaKnown RBP9.98□□□□□ -0.81
COMMD3-215ENST00000602574 LRRC43Q8N309 656 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms