RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 BEGAINQ9BUH8 593 aa17.4■□□□□ 0.38
USE1-210ENST00000601662 WBP1LQ9NX94 342 aa17.4■□□□□ 0.38
USE1-210ENST00000601662 AKAP11Q9UKA4 1901 aa17.4■□□□□ 0.38
USE1-210ENST00000601662 MROH7-TTC4A0A0A0MT08 1334 aa17.4■□□□□ 0.38
USE1-210ENST00000601662 GAKO14976 1311 aa17.4■□□□□ 0.38
USE1-210ENST00000601662 IDH1O75874 414 aaKnown RBP17.39■□□□□ 0.37
USE1-210ENST00000601662 SLC10A3P09131 477 aa17.39■□□□□ 0.37
USE1-210ENST00000601662 IREB2P48200 963 aaKnown RBP17.39■□□□□ 0.37
USE1-210ENST00000601662 FKBP1CQ5VVH2 108 aa17.39■□□□□ 0.37
USE1-210ENST00000601662 NAA16Q6N069 864 aaPredicted RBP17.39■□□□□ 0.37
USE1-210ENST00000601662 FAM83AQ86UY5 434 aa17.39■□□□□ 0.37
USE1-210ENST00000601662 RASAL3Q86YV0 1011 aa17.39■□□□□ 0.37
USE1-210ENST00000601662 SLC10A4Q96EP9 437 aa17.39■□□□□ 0.37
USE1-210ENST00000601662 FAM163AQ96GL9 167 aaPredicted RBP17.39■□□□□ 0.37
USE1-210ENST00000601662 CLMNQ96JQ2 1002 aa17.39■□□□□ 0.37
USE1-210ENST00000601662 DIAPH3Q9NSV4 1193 aa17.39■□□□□ 0.37
USE1-210ENST00000601662 SSC5DA1L4H1 1573 aa17.39■□□□□ 0.37
USE1-210ENST00000601662 GPR75-ASB3A0A0A6YYF3 556 aa17.38■□□□□ 0.37
USE1-210ENST00000601662 FOXN1O15353 648 aa17.38■□□□□ 0.37
USE1-210ENST00000601662 RNF113AO15541 343 aaKnown RBP17.38■□□□□ 0.37
USE1-210ENST00000601662 CHMLP26374 656 aa17.38■□□□□ 0.37
USE1-210ENST00000601662 PICALMQ13492 652 aa17.38■□□□□ 0.37
USE1-210ENST00000601662 LDLRAD1Q5T700 205 aa17.38■□□□□ 0.37
USE1-210ENST00000601662 ZFPM1Q8IX07 1006 aa17.38■□□□□ 0.37
USE1-210ENST00000601662 FAM151AQ8WW52 585 aa17.38■□□□□ 0.37
USE1-210ENST00000601662 NOL10Q9BSC4 688 aaKnown RBP17.38■□□□□ 0.37
USE1-210ENST00000601662 FAM198AQ9UFP1 575 aa17.38■□□□□ 0.37
USE1-210ENST00000601662 UBE3CQ15386 1083 aa17.37■□□□□ 0.37
USE1-210ENST00000601662 SLC9C2Q5TAH2 1124 aa17.37■□□□□ 0.37
USE1-210ENST00000601662 MIGA2Q7L4E1 593 aa17.37■□□□□ 0.37
USE1-210ENST00000601662 CYP7A1P22680 504 aa17.36■□□□□ 0.37
USE1-210ENST00000601662 ZSCAN29Q8IWY8 852 aaPredicted RBP17.36■□□□□ 0.37
USE1-210ENST00000601662 AATFQ9NY61 560 aaKnown RBP eCLIP17.36■□□□□ 0.37
USE1-210ENST00000601662 TSKSQ9UJT2 592 aa17.36■□□□□ 0.37
USE1-210ENST00000601662 AK9Q5TCS8 1911 aa17.36■□□□□ 0.37
USE1-210ENST00000601662 ADD2P35612 726 aa17.35■□□□□ 0.37
USE1-210ENST00000601662 RHBDL3P58872 404 aa17.35■□□□□ 0.37
USE1-210ENST00000601662 MAP3K11Q16584 847 aa17.35■□□□□ 0.37
USE1-210ENST00000601662 ANKRD13AQ8IZ07 590 aa17.35■□□□□ 0.37
USE1-210ENST00000601662 MAGEB6Q8N7X4 407 aa17.35■□□□□ 0.37
USE1-210ENST00000601662 ELP3Q9H9T3 547 aa17.35■□□□□ 0.37
USE1-210ENST00000601662 HELLSQ9NRZ9 838 aa17.35■□□□□ 0.37
USE1-210ENST00000601662 ENTPD3O75355 529 aa17.34■□□□□ 0.37
USE1-210ENST00000601662 WDHD1O75717 1129 aaPredicted RBP17.34■□□□□ 0.37
USE1-210ENST00000601662 BAG3O95817 575 aa17.34■□□□□ 0.37
USE1-210ENST00000601662 PDE6AP16499 860 aa17.34■□□□□ 0.37
USE1-210ENST00000601662 CTCFP49711 727 aaPredicted RBP17.34■□□□□ 0.37
USE1-210ENST00000601662 MFAP1P55081 439 aaKnown RBP17.34■□□□□ 0.37
USE1-210ENST00000601662 MAP3K9P80192 1104 aa17.34■□□□□ 0.37
USE1-210ENST00000601662 ZMYM1Q5SVZ6 1142 aa17.34■□□□□ 0.37
USE1-210ENST00000601662 ADGRA1Q86SQ6 560 aa17.34■□□□□ 0.37
USE1-210ENST00000601662 TEX11Q8IYF3 940 aa17.34■□□□□ 0.37
USE1-210ENST00000601662 SH3RF3Q8TEJ3 882 aaPredicted RBP17.34■□□□□ 0.37
USE1-210ENST00000601662 APPBP2Q92624 585 aa17.34■□□□□ 0.37
USE1-210ENST00000601662 HOOK2Q96ED9 719 aa17.34■□□□□ 0.37
USE1-210ENST00000601662 CSRNP1Q96S65 589 aa17.34■□□□□ 0.37
USE1-210ENST00000601662 IDI2Q9BXS1 227 aa17.34■□□□□ 0.37
USE1-210ENST00000601662 DDX4Q9NQI0 724 aaKnown RBP17.34■□□□□ 0.37
USE1-210ENST00000601662 MYO5AQ9Y4I1 1855 aaKnown RBP17.33■□□□□ 0.37
USE1-210ENST00000601662 LBX1P52954 281 aa17.33■□□□□ 0.36
USE1-210ENST00000601662 DYNLL1P63167 89 aaKnown RBP17.33■□□□□ 0.36
USE1-210ENST00000601662 MCMDC2Q4G0Z9 681 aa17.33■□□□□ 0.36
USE1-210ENST00000601662 SPRYD7Q5W111 196 aa17.33■□□□□ 0.36
USE1-210ENST00000601662 DCAF15Q66K64 600 aa17.33■□□□□ 0.36
USE1-210ENST00000601662 CWC27Q6UX04 472 aaKnown RBP17.33■□□□□ 0.36
USE1-210ENST00000601662 MIGA1Q8NAN2 632 aa17.33■□□□□ 0.36
USE1-210ENST00000601662 WRNIP1Q96S55 665 aa17.33■□□□□ 0.36
USE1-210ENST00000601662 RAD50Q92878 1312 aa17.32■□□□□ 0.36
USE1-210ENST00000601662 ZNF532Q9HCE3 1301 aa17.32■□□□□ 0.36
USE1-210ENST00000601662 NMIQ13287 307 aaPredicted RBP17.32■□□□□ 0.36
USE1-210ENST00000601662 C8orf34Q49A92 452 aa17.32■□□□□ 0.36
USE1-210ENST00000601662 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.32■□□□□ 0.36
USE1-210ENST00000601662 SH3BP5LQ7L8J4 393 aa17.32■□□□□ 0.36
USE1-210ENST00000601662 CERS3Q8IU89 383 aa17.32■□□□□ 0.36
USE1-210ENST00000601662 WNK4Q96J92 1243 aa17.32■□□□□ 0.36
USE1-210ENST00000601662 ESYT1Q9BSJ8 1104 aa17.32■□□□□ 0.36
USE1-210ENST00000601662 ZNF341Q9BYN7 854 aa17.32■□□□□ 0.36
USE1-210ENST00000601662 CSADQ9Y600 493 aa17.32■□□□□ 0.36
USE1-210ENST00000601662 TCRBV5S4A2TA0A5A2 114 aa17.31■□□□□ 0.36
USE1-210ENST00000601662 DDTLA6NHG4 134 aaPredicted RBP17.31■□□□□ 0.36
USE1-210ENST00000601662 TRPA1O75762 1119 aa17.31■□□□□ 0.36
USE1-210ENST00000601662 HSPA8P11142 646 aaKnown RBP17.31■□□□□ 0.36
USE1-210ENST00000601662 VGLL4Q14135 290 aa17.31■□□□□ 0.36
USE1-210ENST00000601662 KIAA1211Q6ZU35 1233 aa17.31■□□□□ 0.36
USE1-210ENST00000601662 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.31■□□□□ 0.36
USE1-210ENST00000601662 CNKSR2Q8WXI2 1034 aa17.31■□□□□ 0.36
USE1-210ENST00000601662 ZKSCAN4Q969J2 545 aaPredicted RBP17.31■□□□□ 0.36
USE1-210ENST00000601662 RPAP1Q9BWH6 1393 aaPredicted RBP17.3■□□□□ 0.36
USE1-210ENST00000601662 SGSM2O43147 1006 aa17.3■□□□□ 0.36
USE1-210ENST00000601662 REC8O95072 547 aa17.3■□□□□ 0.36
USE1-210ENST00000601662 SLURP2P0DP57 97 aa17.3■□□□□ 0.36
USE1-210ENST00000601662 PLCG2P16885 1265 aa17.3■□□□□ 0.36
USE1-210ENST00000601662 PPP4CP60510 307 aa17.3■□□□□ 0.36
USE1-210ENST00000601662 COL13A1Q5TAT6 717 aaPredicted RBP17.3■□□□□ 0.36
USE1-210ENST00000601662 MAPKAPK5Q8IW41 473 aa17.3■□□□□ 0.36
USE1-210ENST00000601662 TGFBRAP1Q8WUH2 860 aa17.3■□□□□ 0.36
USE1-210ENST00000601662 FAM227BQ96M60 508 aa17.3■□□□□ 0.36
USE1-210ENST00000601662 BACH2Q9BYV9 841 aa17.3■□□□□ 0.36
USE1-210ENST00000601662 THSD7BQ9C0I4 1608 aa17.29■□□□□ 0.36
USE1-210ENST00000601662 UNCXA6NJT0 531 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms