RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 NBPF12Q5TAG4 269 aaPredicted RBP13.79□□□□□ -0.2
ZNF548-211ENST00000600927 TMED8Q6PL24 325 aaPredicted RBP13.79□□□□□ -0.2
ZNF548-211ENST00000600927 FAM83AQ86UY5 434 aa13.79□□□□□ -0.2
ZNF548-211ENST00000600927 HSCBQ8IWL3 235 aa13.79□□□□□ -0.2
ZNF548-211ENST00000600927 CDAN1Q8IWY9 1227 aa13.79□□□□□ -0.2
ZNF548-211ENST00000600927 MAP4K1Q92918 833 aa13.79□□□□□ -0.2
ZNF548-211ENST00000600927 CCDC102AQ96A19 550 aa13.79□□□□□ -0.2
ZNF548-211ENST00000600927 TBC1D2Q9BYX2 928 aa13.79□□□□□ -0.2
ZNF548-211ENST00000600927 OTOFQ9HC10 1997 aa13.79□□□□□ -0.2
ZNF548-211ENST00000600927 ST18O60284 1047 aa13.78□□□□□ -0.2
ZNF548-211ENST00000600927 CACNB3P54284 484 aa13.78□□□□□ -0.2
ZNF548-211ENST00000600927 MAP2K1Q02750 393 aaPredicted RBP13.78□□□□□ -0.2
ZNF548-211ENST00000600927 NMIQ13287 307 aaPredicted RBP13.78□□□□□ -0.2
ZNF548-211ENST00000600927 SPTY2D1Q68D10 685 aaPredicted RBP13.78□□□□□ -0.2
ZNF548-211ENST00000600927 CDC42EP5Q6NZY7 148 aa13.78□□□□□ -0.2
ZNF548-211ENST00000600927 PAXIP1Q6ZW49 1069 aaPredicted RBP13.78□□□□□ -0.2
ZNF548-211ENST00000600927 ERICH6Q7L0X2 663 aa13.78□□□□□ -0.2
ZNF548-211ENST00000600927 NSUN4Q96CB9 384 aaKnown RBP13.78□□□□□ -0.2
ZNF548-211ENST00000600927 ZIC5Q96T25 663 aa13.78□□□□□ -0.2
ZNF548-211ENST00000600927 DNAJC2Q99543 621 aaKnown RBP13.78□□□□□ -0.2
ZNF548-211ENST00000600927 TMEM39BQ9GZU3 492 aa13.78□□□□□ -0.2
ZNF548-211ENST00000600927 MROH7-TTC4A0A0A0MT08 1334 aa13.78□□□□□ -0.2
ZNF548-211ENST00000600927 UNCXA6NJT0 531 aa13.77□□□□□ -0.21
ZNF548-211ENST00000600927 TCP10L2B9ZVM9 353 aa13.77□□□□□ -0.21
ZNF548-211ENST00000600927 UBE2Q2LH0YL09 131 aa13.77□□□□□ -0.21
ZNF548-211ENST00000600927 FOXN1O15353 648 aa13.77□□□□□ -0.21
ZNF548-211ENST00000600927 RNF113AO15541 343 aaKnown RBP13.77□□□□□ -0.21
ZNF548-211ENST00000600927 TNNI2P48788 182 aa13.77□□□□□ -0.21
ZNF548-211ENST00000600927 ZNF157P51786 506 aaPredicted RBP13.77□□□□□ -0.21
ZNF548-211ENST00000600927 MECOMQ03112 1051 aa13.77□□□□□ -0.21
ZNF548-211ENST00000600927 TSGA10IPQ3SY00 556 aa13.77□□□□□ -0.21
ZNF548-211ENST00000600927 SUPT20HL1Q3ZLR7 823 aa13.77□□□□□ -0.21
ZNF548-211ENST00000600927 ZMYM1Q5SVZ6 1142 aa13.77□□□□□ -0.21
ZNF548-211ENST00000600927 DOCK2Q92608 1830 aa13.77□□□□□ -0.21
ZNF548-211ENST00000600927 TM6SF1Q9BZW5 370 aa13.77□□□□□ -0.21
ZNF548-211ENST00000600927 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.77□□□□□ -0.21
ZNF548-211ENST00000600927 ABCF2Q9UG63 623 aa13.77□□□□□ -0.21
ZNF548-211ENST00000600927 MYH2Q9UKX2 1941 aa13.77□□□□□ -0.21
ZNF548-211ENST00000600927 ATRNL1Q5VV63 1379 aa13.76□□□□□ -0.21
ZNF548-211ENST00000600927 CCDC171Q6TFL3 1326 aa13.76□□□□□ -0.21
ZNF548-211ENST00000600927 GOLIM4O00461 696 aa13.76□□□□□ -0.21
ZNF548-211ENST00000600927 CYP2E1P05181 493 aaPredicted RBP13.76□□□□□ -0.21
ZNF548-211ENST00000600927 NFIAQ12857 509 aa13.76□□□□□ -0.21
ZNF548-211ENST00000600927 NECTIN1Q15223 517 aa13.76□□□□□ -0.21
ZNF548-211ENST00000600927 RNF20Q5VTR2 975 aa13.76□□□□□ -0.21
ZNF548-211ENST00000600927 ARMC9Q7Z3E5 817 aa13.76□□□□□ -0.21
ZNF548-211ENST00000600927 DZIP1Q86YF9 867 aaKnown RBP13.76□□□□□ -0.21
ZNF548-211ENST00000600927 IDI2Q9BXS1 227 aa13.76□□□□□ -0.21
ZNF548-211ENST00000600927 FZD1Q9UP38 647 aa13.76□□□□□ -0.21
ZNF548-211ENST00000600927 GPR75-ASB3A0A0A6YYF3 556 aa13.75□□□□□ -0.21
ZNF548-211ENST00000600927 PPP1R12BO60237 982 aaPredicted RBP13.75□□□□□ -0.21
ZNF548-211ENST00000600927 USP2O75604 605 aaPredicted RBP13.75□□□□□ -0.21
ZNF548-211ENST00000600927 ZKSCAN1P17029 563 aaPredicted RBP13.75□□□□□ -0.21
ZNF548-211ENST00000600927 ZAP70P43403 619 aa13.75□□□□□ -0.21
ZNF548-211ENST00000600927 RHBDL3P58872 404 aa13.75□□□□□ -0.21
ZNF548-211ENST00000600927 GRM1Q13255 1194 aa13.75□□□□□ -0.21
ZNF548-211ENST00000600927 UBE3CQ15386 1083 aa13.75□□□□□ -0.21
ZNF548-211ENST00000600927 SLF2Q8IX21 1173 aa13.75□□□□□ -0.21
ZNF548-211ENST00000600927 FAM151AQ8WW52 585 aa13.75□□□□□ -0.21
ZNF548-211ENST00000600927 FAM227BQ96M60 508 aa13.75□□□□□ -0.21
ZNF548-211ENST00000600927 DSCC1Q9BVC3 393 aa13.75□□□□□ -0.21
ZNF548-211ENST00000600927 IL25Q9H293 177 aa13.75□□□□□ -0.21
ZNF548-211ENST00000600927 TMOD2Q9NZR1 351 aa13.75□□□□□ -0.21
ZNF548-211ENST00000600927 FAM198AQ9UFP1 575 aa13.75□□□□□ -0.21
ZNF548-211ENST00000600927 ANGEL1Q9UNK9 670 aaKnown RBP13.75□□□□□ -0.21
ZNF548-211ENST00000600927 COL2A1P02458 1487 aaPredicted RBP13.74□□□□□ -0.21
ZNF548-211ENST00000600927 A0A0D9SFI3 127 aa13.74□□□□□ -0.21
ZNF548-211ENST00000600927 K7ELQ4 463 aaPredicted RBP13.74□□□□□ -0.21
ZNF548-211ENST00000600927 NPM3O75607 178 aaKnown RBP13.74□□□□□ -0.21
ZNF548-211ENST00000600927 WDHD1O75717 1129 aaPredicted RBP13.74□□□□□ -0.21
ZNF548-211ENST00000600927 PSMA5P28066 241 aa13.74□□□□□ -0.21
ZNF548-211ENST00000600927 BTDP43251 543 aa13.74□□□□□ -0.21
ZNF548-211ENST00000600927 PRKG1Q13976 671 aa13.74□□□□□ -0.21
ZNF548-211ENST00000600927 TTLL12Q14166 644 aaPredicted RBP13.74□□□□□ -0.21
ZNF548-211ENST00000600927 PIH1D3Q9NQM4 214 aaKnown RBP13.74□□□□□ -0.21
ZNF548-211ENST00000600927 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
ZNF548-211ENST00000600927 HSPA8P11142 646 aaKnown RBP13.73□□□□□ -0.21
ZNF548-211ENST00000600927 GSTO1P78417 241 aa13.73□□□□□ -0.21
ZNF548-211ENST00000600927 KIF23Q02241 960 aaPredicted RBP13.73□□□□□ -0.21
ZNF548-211ENST00000600927 KRT32Q14532 448 aa13.73□□□□□ -0.21
ZNF548-211ENST00000600927 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.73□□□□□ -0.21
ZNF548-211ENST00000600927 APPBP2Q92624 585 aa13.73□□□□□ -0.21
ZNF548-211ENST00000600927 EDC3Q96F86 508 aaKnown RBP13.73□□□□□ -0.21
ZNF548-211ENST00000600927 USP40Q9NVE5 1235 aa13.73□□□□□ -0.21
ZNF548-211ENST00000600927 MYO5AQ9Y4I1 1855 aaKnown RBP13.73□□□□□ -0.21
ZNF548-211ENST00000600927 CA12O43570 354 aa13.72□□□□□ -0.21
ZNF548-211ENST00000600927 ENTPD3O75355 529 aa13.72□□□□□ -0.21
ZNF548-211ENST00000600927 IREB2P48200 963 aaKnown RBP13.72□□□□□ -0.21
ZNF548-211ENST00000600927 CTCFP49711 727 aaPredicted RBP13.72□□□□□ -0.21
ZNF548-211ENST00000600927 PTH1RQ03431 593 aa13.72□□□□□ -0.21
ZNF548-211ENST00000600927 SPRYD7Q5W111 196 aa13.72□□□□□ -0.21
ZNF548-211ENST00000600927 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.72□□□□□ -0.21
ZNF548-211ENST00000600927 ADGRA1Q86SQ6 560 aa13.72□□□□□ -0.21
ZNF548-211ENST00000600927 REM2Q8IYK8 340 aaPredicted RBP13.72□□□□□ -0.21
ZNF548-211ENST00000600927 ANKRD13AQ8IZ07 590 aa13.72□□□□□ -0.21
ZNF548-211ENST00000600927 AIDAQ96BJ3 306 aa13.72□□□□□ -0.21
ZNF548-211ENST00000600927 CLMNQ96JQ2 1002 aa13.72□□□□□ -0.21
ZNF548-211ENST00000600927 CSRNP1Q96S65 589 aa13.72□□□□□ -0.21
ZNF548-211ENST00000600927 ALDH8A1Q9H2A2 487 aaPredicted RBP13.72□□□□□ -0.21
ZNF548-211ENST00000600927 DDX4Q9NQI0 724 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms