RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 RNF41Q9H4P4 317 aaPredicted RBP25.17■■□□□ 1.62
GRAMD1A-212ENST00000600231 UBE2Q2LH0YL09 131 aa25.16■■□□□ 1.62
GRAMD1A-212ENST00000600231 NPHP1O15259 732 aa25.16■■□□□ 1.62
GRAMD1A-212ENST00000600231 STK38Q15208 465 aa25.16■■□□□ 1.62
GRAMD1A-212ENST00000600231 KRT40Q6A162 431 aa25.16■■□□□ 1.62
GRAMD1A-212ENST00000600231 ANKRD2Q9GZV1 360 aa25.16■■□□□ 1.62
GRAMD1A-212ENST00000600231 TAF1LQ8IZX4 1826 aa25.16■■□□□ 1.62
GRAMD1A-212ENST00000600231 HIBADHP31937 336 aaKnown RBP25.16■■□□□ 1.62
GRAMD1A-212ENST00000600231 WTAPQ15007 396 aa25.16■■□□□ 1.62
GRAMD1A-212ENST00000600231 SART3Q15020 963 aaKnown RBP25.16■■□□□ 1.62
GRAMD1A-212ENST00000600231 TRAPPC3LQ5T215 181 aa25.16■■□□□ 1.62
GRAMD1A-212ENST00000600231 MEX3CQ5U5Q3 659 aaKnown RBP25.16■■□□□ 1.62
GRAMD1A-212ENST00000600231 ADALQ6DHV7 355 aa25.16■■□□□ 1.62
GRAMD1A-212ENST00000600231 RGS22Q8NE09 1264 aa25.16■■□□□ 1.62
GRAMD1A-212ENST00000600231 SEMA3EO15041 775 aa25.15■■□□□ 1.62
GRAMD1A-212ENST00000600231 FAM160A1Q05DH4 1040 aa25.15■■□□□ 1.62
GRAMD1A-212ENST00000600231 SYNE3Q6ZMZ3 975 aa25.15■■□□□ 1.62
GRAMD1A-212ENST00000600231 FAM196AQ6ZSG2 479 aa25.15■■□□□ 1.62
GRAMD1A-212ENST00000600231 SF3A1Q15459 793 aaKnown RBP25.15■■□□□ 1.62
GRAMD1A-212ENST00000600231 CBX8Q9HC52 389 aa25.15■■□□□ 1.62
GRAMD1A-212ENST00000600231 YEATS4O95619 227 aa25.14■■□□□ 1.62
GRAMD1A-212ENST00000600231 TXNRD3Q86VQ6 643 aa25.14■■□□□ 1.62
GRAMD1A-212ENST00000600231 ANAPC4Q9UJX5 808 aa25.14■■□□□ 1.62
GRAMD1A-212ENST00000600231 LY75O60449 1722 aa25.14■■□□□ 1.61
GRAMD1A-212ENST00000600231 KCNG4Q8TDN1 519 aa25.14■■□□□ 1.61
GRAMD1A-212ENST00000600231 NSUN4Q96CB9 384 aaKnown RBP25.14■■□□□ 1.61
GRAMD1A-212ENST00000600231 SLC26A6Q9BXS9 759 aa25.14■■□□□ 1.61
GRAMD1A-212ENST00000600231 ERICH2A1L162 156 aa25.13■■□□□ 1.61
GRAMD1A-212ENST00000600231 SPTLC2O15270 562 aa25.13■■□□□ 1.61
GRAMD1A-212ENST00000600231 ZNF500O60304 480 aaPredicted RBP25.13■■□□□ 1.61
GRAMD1A-212ENST00000600231 KINO60870 393 aaKnown RBP25.13■■□□□ 1.61
GRAMD1A-212ENST00000600231 CYP2D7A0A087X1C5 515 aa25.13■■□□□ 1.61
GRAMD1A-212ENST00000600231 MRPS27Q92552 414 aaKnown RBP25.13■■□□□ 1.61
GRAMD1A-212ENST00000600231 DNAJC25Q9H1X3 360 aa25.13■■□□□ 1.61
GRAMD1A-212ENST00000600231 LRRC4BQ9NT99 713 aa25.13■■□□□ 1.61
GRAMD1A-212ENST00000600231 A0A1B0GVL5 298 aa25.12■■□□□ 1.61
GRAMD1A-212ENST00000600231 CTAGE5O15320 804 aa25.12■■□□□ 1.61
GRAMD1A-212ENST00000600231 MECOMQ03112 1051 aa25.12■■□□□ 1.61
GRAMD1A-212ENST00000600231 NFIXQ14938 502 aa25.12■■□□□ 1.61
GRAMD1A-212ENST00000600231 ANO1Q5XXA6 986 aa25.12■■□□□ 1.61
GRAMD1A-212ENST00000600231 MTA3Q9BTC8 594 aa25.12■■□□□ 1.61
GRAMD1A-212ENST00000600231 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.12■■□□□ 1.619e-7■■■□□ 15.1
GRAMD1A-212ENST00000600231 AFF2P51816 1311 aa25.12■■□□□ 1.61
GRAMD1A-212ENST00000600231 BAZ2AQ9UIF9 1905 aaKnown RBP25.12■■□□□ 1.61
GRAMD1A-212ENST00000600231 EP400Q96L91 3159 aa25.12■■□□□ 1.61
GRAMD1A-212ENST00000600231 SBF2Q86WG5 1849 aa25.12■■□□□ 1.61
GRAMD1A-212ENST00000600231 A0A1W2PQ27 194 aa25.12■■□□□ 1.61
GRAMD1A-212ENST00000600231 A0A1W2PQ64 194 aa25.12■■□□□ 1.61
GRAMD1A-212ENST00000600231 A0A1W2PQD8 194 aa25.12■■□□□ 1.61
GRAMD1A-212ENST00000600231 IFNAR1P17181 557 aa25.12■■□□□ 1.61
GRAMD1A-212ENST00000600231 SSRP1Q08945 709 aaKnown RBP25.12■■□□□ 1.61
GRAMD1A-212ENST00000600231 CHAF1AQ13111 956 aaPredicted RBP25.12■■□□□ 1.61
GRAMD1A-212ENST00000600231 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.11■■□□□ 1.61
GRAMD1A-212ENST00000600231 ZNF165P49910 485 aa25.11■■□□□ 1.61
GRAMD1A-212ENST00000600231 SLC51AQ86UW1 340 aa25.11■■□□□ 1.61
GRAMD1A-212ENST00000600231 FMR1NBQ8N0W7 255 aaPredicted RBP25.11■■□□□ 1.61
GRAMD1A-212ENST00000600231 TMTC2Q8N394 836 aa25.11■■□□□ 1.61
GRAMD1A-212ENST00000600231 UBAC1Q9BSL1 405 aa25.11■■□□□ 1.61
GRAMD1A-212ENST00000600231 FMNL1O95466 1100 aaPredicted RBP25.11■■□□□ 1.61
GRAMD1A-212ENST00000600231 PRDX5P30044 214 aa25.11■■□□□ 1.61
GRAMD1A-212ENST00000600231 RTN1Q16799 776 aa25.11■■□□□ 1.61
GRAMD1A-212ENST00000600231 SEPT12Q8IYM1 358 aa25.11■■□□□ 1.61
GRAMD1A-212ENST00000600231 ESR2Q92731 530 aa25.11■■□□□ 1.61
GRAMD1A-212ENST00000600231 BRIP1Q9BX63 1249 aa25.11■■□□□ 1.61
GRAMD1A-212ENST00000600231 NID2Q14112 1375 aa25.1■■□□□ 1.61
GRAMD1A-212ENST00000600231 STK36Q9NRP7 1315 aa25.1■■□□□ 1.61
GRAMD1A-212ENST00000600231 ONECUT3O60422 494 aaPredicted RBP25.1■■□□□ 1.61
GRAMD1A-212ENST00000600231 JAG2Q9Y219 1238 aa25.1■■□□□ 1.61
GRAMD1A-212ENST00000600231 PDS5AQ29RF7 1337 aaKnown RBP25.1■■□□□ 1.61
GRAMD1A-212ENST00000600231 GUCY1A2P33402 732 aa25.1■■□□□ 1.61
GRAMD1A-212ENST00000600231 NDUFA8P51970 172 aa25.1■■□□□ 1.61
GRAMD1A-212ENST00000600231 CCDC82Q8N4S0 544 aa25.1■■□□□ 1.61
GRAMD1A-212ENST00000600231 ZNF830Q96NB3 372 aaPredicted RBP25.1■■□□□ 1.61
GRAMD1A-212ENST00000600231 TRIM29Q14134 588 aa25.09■■□□□ 1.61
GRAMD1A-212ENST00000600231 MYH2Q9UKX2 1941 aa25.09■■□□□ 1.61
GRAMD1A-212ENST00000600231 ECM29Q5VYK3 1845 aa25.09■■□□□ 1.61
GRAMD1A-212ENST00000600231 TNRC6CQ9HCJ0 1690 aaKnown RBP25.09■■□□□ 1.61
GRAMD1A-212ENST00000600231 MYH13Q9UKX3 1938 aa25.09■■□□□ 1.61
GRAMD1A-212ENST00000600231 GNL2Q13823 731 aaKnown RBP25.09■■□□□ 1.61
GRAMD1A-212ENST00000600231 SEC23AQ15436 765 aa25.09■■□□□ 1.61
GRAMD1A-212ENST00000600231 ZNF654Q8IZM8 581 aa25.09■■□□□ 1.61
GRAMD1A-212ENST00000600231 CMTR1Q8N1G2 835 aaKnown RBP25.09■■□□□ 1.61
GRAMD1A-212ENST00000600231 NUP133Q8WUM0 1156 aa25.09■■□□□ 1.61
GRAMD1A-212ENST00000600231 AATFQ9NY61 560 aaKnown RBP eCLIP25.09■■□□□ 1.61
GRAMD1A-212ENST00000600231 TNKSO95271 1327 aa25.08■■□□□ 1.61
GRAMD1A-212ENST00000600231 U2AF2P26368 475 aaKnown RBP eCLIP25.08■■□□□ 1.613e-8■■■■□ 20.8
GRAMD1A-212ENST00000600231 CTR9Q6PD62 1173 aa25.08■■□□□ 1.61
GRAMD1A-212ENST00000600231 IRS2Q9Y4H2 1338 aa25.08■■□□□ 1.6
GRAMD1A-212ENST00000600231 FANCBQ8NB91 859 aa25.08■■□□□ 1.6
GRAMD1A-212ENST00000600231 NAP1L5Q96NT1 182 aaPredicted RBP25.08■■□□□ 1.6
GRAMD1A-212ENST00000600231 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.08■■□□□ 1.6
GRAMD1A-212ENST00000600231 USP17L12C9JPN9 530 aa25.07■■□□□ 1.6
GRAMD1A-212ENST00000600231 USP17L21D6R901 530 aa25.07■■□□□ 1.6
GRAMD1A-212ENST00000600231 PRDM1O75626 825 aa25.07■■□□□ 1.6
GRAMD1A-212ENST00000600231 SLC39A14Q15043 492 aa25.07■■□□□ 1.6
GRAMD1A-212ENST00000600231 AXDND1Q5T1B0 1012 aaPredicted RBP25.07■■□□□ 1.6
GRAMD1A-212ENST00000600231 CNBD1Q8NA66 436 aa25.07■■□□□ 1.6
GRAMD1A-212ENST00000600231 ERCC4Q92889 916 aaPredicted RBP25.07■■□□□ 1.6
GRAMD1A-212ENST00000600231 MARCKSP29966 332 aaPredicted RBP25.07■■□□□ 1.6
GRAMD1A-212ENST00000600231 NBPF11Q86T75 865 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms