RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 TCRBV5S4A2TA0A5A2 114 aa18.45■□□□□ 0.54
LIG1-219ENST00000600055 HSPA1AP0DMV8 641 aaKnown RBP18.45■□□□□ 0.54
LIG1-219ENST00000600055 HSPA1BP0DMV9 641 aaKnown RBP18.45■□□□□ 0.54
LIG1-219ENST00000600055 PLCG2P16885 1265 aa18.45■□□□□ 0.54
LIG1-219ENST00000600055 MX1P20591 662 aa18.45■□□□□ 0.54
LIG1-219ENST00000600055 MAP2K2P36507 400 aa18.45■□□□□ 0.54
LIG1-219ENST00000600055 MKRN3Q13064 507 aaKnown RBP18.45■□□□□ 0.54
LIG1-219ENST00000600055 NOGQ13253 232 aa18.45■□□□□ 0.54
LIG1-219ENST00000600055 ZSCAN29Q8IWY8 852 aaPredicted RBP18.45■□□□□ 0.54
LIG1-219ENST00000600055 PI4K2BQ8TCG2 481 aa18.45■□□□□ 0.54
LIG1-219ENST00000600055 TGFBRAP1Q8WUH2 860 aa18.45■□□□□ 0.54
LIG1-219ENST00000600055 TTC41PQ6P2S7 1318 aa18.45■□□□□ 0.54
LIG1-219ENST00000600055 KIF23Q02241 960 aaPredicted RBP18.44■□□□□ 0.54
LIG1-219ENST00000600055 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.44■□□□□ 0.54
LIG1-219ENST00000600055 MAPKAPK5Q8IW41 473 aa18.44■□□□□ 0.54
LIG1-219ENST00000600055 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.44■□□□□ 0.54
LIG1-219ENST00000600055 SLC10A4Q96EP9 437 aa18.44■□□□□ 0.54
LIG1-219ENST00000600055 CSRNP1Q96S65 589 aa18.44■□□□□ 0.54
LIG1-219ENST00000600055 OSBPL5Q9H0X9 879 aaPredicted RBP18.44■□□□□ 0.54
LIG1-219ENST00000600055 THSD7BQ9C0I4 1608 aa18.43■□□□□ 0.54
LIG1-219ENST00000600055 NPM3O75607 178 aaKnown RBP18.43■□□□□ 0.54
LIG1-219ENST00000600055 ADD2P35612 726 aa18.43■□□□□ 0.54
LIG1-219ENST00000600055 MAP3K9P80192 1104 aa18.43■□□□□ 0.54
LIG1-219ENST00000600055 NUCB1Q02818 461 aa18.43■□□□□ 0.54
LIG1-219ENST00000600055 DCAF15Q66K64 600 aa18.43■□□□□ 0.54
LIG1-219ENST00000600055 ANKRD13AQ8IZ07 590 aa18.43■□□□□ 0.54
LIG1-219ENST00000600055 HOOK2Q96ED9 719 aa18.43■□□□□ 0.54
LIG1-219ENST00000600055 RIOK1Q9BRS2 568 aaKnown RBP18.43■□□□□ 0.54
LIG1-219ENST00000600055 ELP3Q9H9T3 547 aa18.43■□□□□ 0.54
LIG1-219ENST00000600055 WBP1LQ9NX94 342 aa18.43■□□□□ 0.54
LIG1-219ENST00000600055 ATRNL1Q5VV63 1379 aa18.42■□□□□ 0.54
LIG1-219ENST00000600055 MAGEB6P1A0A0J9YX57 407 aa18.42■□□□□ 0.54
LIG1-219ENST00000600055 ERC2O15083 957 aa18.42■□□□□ 0.54
LIG1-219ENST00000600055 GLRX3O76003 335 aaKnown RBP18.42■□□□□ 0.54
LIG1-219ENST00000600055 VGLL4Q14135 290 aa18.42■□□□□ 0.54
LIG1-219ENST00000600055 TMED8Q6PL24 325 aaPredicted RBP18.42■□□□□ 0.54
LIG1-219ENST00000600055 CHD1LQ86WJ1 897 aa18.42■□□□□ 0.54
LIG1-219ENST00000600055 ZKSCAN4Q969J2 545 aaPredicted RBP18.42■□□□□ 0.54
LIG1-219ENST00000600055 WRNIP1Q96S55 665 aa18.42■□□□□ 0.54
LIG1-219ENST00000600055 ZNF341Q9BYN7 854 aa18.42■□□□□ 0.54
LIG1-219ENST00000600055 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.42■□□□□ 0.543e-7■■□□□ 14.4
LIG1-219ENST00000600055 FLT1P17948 1338 aa18.42■□□□□ 0.54
LIG1-219ENST00000600055 INPP5BP32019 993 aa18.41■□□□□ 0.54
LIG1-219ENST00000600055 GJA5P36382 358 aa18.41■□□□□ 0.54
LIG1-219ENST00000600055 PDE1AP54750 535 aa18.41■□□□□ 0.54
LIG1-219ENST00000600055 MAP2K1Q02750 393 aaPredicted RBP18.41■□□□□ 0.54
LIG1-219ENST00000600055 SPRYD7Q5W111 196 aa18.41■□□□□ 0.54
LIG1-219ENST00000600055 KBTBD3Q8NAB2 608 aa18.41■□□□□ 0.54
LIG1-219ENST00000600055 CNKSR2Q8WXI2 1034 aa18.41■□□□□ 0.54
LIG1-219ENST00000600055 WNK4Q96J92 1243 aa18.41■□□□□ 0.54
LIG1-219ENST00000600055 STAP2Q9UGK3 403 aa18.41■□□□□ 0.54
LIG1-219ENST00000600055 UNCXA6NJT0 531 aa18.4■□□□□ 0.54
LIG1-219ENST00000600055 FOXN1O15353 648 aa18.4■□□□□ 0.54
LIG1-219ENST00000600055 LCORLQ8N3X6 602 aa18.4■□□□□ 0.54
LIG1-219ENST00000600055 SAP30BPQ9UHR5 308 aaKnown RBP18.4■□□□□ 0.54
LIG1-219ENST00000600055 ZNF112Q9UJU3 913 aa18.4■□□□□ 0.54
LIG1-219ENST00000600055 CSADQ9Y600 493 aa18.4■□□□□ 0.54
LIG1-219ENST00000600055 SNCAIPQ9Y6H5 919 aa18.4■□□□□ 0.54
LIG1-219ENST00000600055 PCNTO95613 3336 aa18.39■□□□□ 0.54
LIG1-219ENST00000600055 FAM196BA6NMK8 535 aa18.39■□□□□ 0.53
LIG1-219ENST00000600055 CENPBP07199 599 aaPredicted RBP18.39■□□□□ 0.53
LIG1-219ENST00000600055 USP5P45974 858 aa18.39■□□□□ 0.53
LIG1-219ENST00000600055 MAP3K10Q02779 954 aa18.39■□□□□ 0.53
LIG1-219ENST00000600055 UBE3CQ15386 1083 aa18.39■□□□□ 0.53
LIG1-219ENST00000600055 SLC4A8Q2Y0W8 1093 aa18.39■□□□□ 0.53
LIG1-219ENST00000600055 ARMT1Q9H993 441 aa18.39■□□□□ 0.53
LIG1-219ENST00000600055 PALD1Q9ULE6 856 aa18.39■□□□□ 0.53
LIG1-219ENST00000600055 OTOFQ9HC10 1997 aa18.39■□□□□ 0.53
LIG1-219ENST00000600055 PHF20L1A8MW92 1017 aa18.38■□□□□ 0.53
LIG1-219ENST00000600055 MBD4O95243 580 aa18.38■□□□□ 0.53
LIG1-219ENST00000600055 ZSCAN25Q6NSZ9 544 aa18.38■□□□□ 0.53
LIG1-219ENST00000600055 CERS3Q8IU89 383 aa18.38■□□□□ 0.53
LIG1-219ENST00000600055 OPTNQ96CV9 577 aa18.38■□□□□ 0.53
LIG1-219ENST00000600055 PUS7LQ9H0K6 701 aaKnown RBP18.38■□□□□ 0.53
LIG1-219ENST00000600055 COL2A1P02458 1487 aaPredicted RBP18.38■□□□□ 0.53
LIG1-219ENST00000600055 AK9Q5TCS8 1911 aa18.37■□□□□ 0.53
LIG1-219ENST00000600055 PRKAB2O43741 272 aa18.37■□□□□ 0.53
LIG1-219ENST00000600055 PLEKHM2Q8IWE5 1019 aa18.37■□□□□ 0.53
LIG1-219ENST00000600055 AIDAQ96BJ3 306 aa18.37■□□□□ 0.53
LIG1-219ENST00000600055 TSKSQ9UJT2 592 aa18.37■□□□□ 0.53
LIG1-219ENST00000600055 RNF113AO15541 343 aaKnown RBP18.36■□□□□ 0.53
LIG1-219ENST00000600055 ZBTB48P10074 688 aaPredicted RBP18.36■□□□□ 0.53
LIG1-219ENST00000600055 SDR42E1Q8WUS8 393 aa18.36■□□□□ 0.53
LIG1-219ENST00000600055 OTUD5Q96G74 571 aa18.36■□□□□ 0.53
LIG1-219ENST00000600055 BEGAINQ9BUH8 593 aa18.36■□□□□ 0.53
LIG1-219ENST00000600055 CRNKL1Q9BZJ0 848 aaKnown RBP18.36■□□□□ 0.53
LIG1-219ENST00000600055 DHX36Q9H2U1 1008 aaKnown RBP18.36■□□□□ 0.53
LIG1-219ENST00000600055 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.36■□□□□ 0.53
LIG1-219ENST00000600055 SPDYE5A6NIY4 337 aa18.35■□□□□ 0.53
LIG1-219ENST00000600055 TBC1D12O60347 775 aa18.35■□□□□ 0.53
LIG1-219ENST00000600055 PDE4AP27815 886 aa18.35■□□□□ 0.53
LIG1-219ENST00000600055 RRP1BQ14684 758 aaKnown RBP18.35■□□□□ 0.53
LIG1-219ENST00000600055 OSBP2Q969R2 916 aa18.35■□□□□ 0.53
LIG1-219ENST00000600055 FSD1Q9BTV5 496 aa18.35■□□□□ 0.53
LIG1-219ENST00000600055 PI4KBQ9UBF8 816 aa18.35■□□□□ 0.53
LIG1-219ENST00000600055 CDK5RAP2Q96SN8 1893 aa18.35■□□□□ 0.53
LIG1-219ENST00000600055 TM4SF4P48230 202 aa18.34■□□□□ 0.53
LIG1-219ENST00000600055 NOL9Q5SY16 702 aaKnown RBP18.34■□□□□ 0.53
LIG1-219ENST00000600055 ERO1BQ86YB8 467 aa18.34■□□□□ 0.53
LIG1-219ENST00000600055 APPBP2Q92624 585 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms