RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 HDAC1Q13547 482 aaPredicted RBP34.24■■■■□ 3.07
SSBP4-206ENST00000599699 REM2Q8IYK8 340 aaPredicted RBP34.24■■■■□ 3.07
SSBP4-206ENST00000599699 DDX55Q8NHQ9 600 aaKnown RBP eCLIP34.24■■■■□ 3.075e-8■■■■■ 57.5
SSBP4-206ENST00000599699 PAG1Q9NWQ8 432 aa34.24■■■■□ 3.07
SSBP4-206ENST00000599699 PPP4CP60510 307 aa34.23■■■■□ 3.07
SSBP4-206ENST00000599699 PPP1R3FQ6ZSY5 799 aaPredicted RBP34.23■■■■□ 3.07
SSBP4-206ENST00000599699 EDC3Q96F86 508 aaKnown RBP34.23■■■■□ 3.07
SSBP4-206ENST00000599699 WNK4Q96J92 1243 aa34.23■■■■□ 3.07
SSBP4-206ENST00000599699 MYO5AQ9Y4I1 1855 aaKnown RBP34.22■■■■□ 3.07
SSBP4-206ENST00000599699 AK9Q5TCS8 1911 aa34.22■■■■□ 3.07
SSBP4-206ENST00000599699 CA12O43570 354 aa34.22■■■■□ 3.07
SSBP4-206ENST00000599699 VGLL4Q14135 290 aa34.22■■■■□ 3.07
SSBP4-206ENST00000599699 MIGA1Q8NAN2 632 aa34.22■■■■□ 3.07
SSBP4-206ENST00000599699 HAUS7Q99871 368 aa34.22■■■■□ 3.07
SSBP4-206ENST00000599699 NPM3O75607 178 aaKnown RBP34.21■■■■□ 3.07
SSBP4-206ENST00000599699 SLC9C2Q5TAH2 1124 aa34.21■■■■□ 3.07
SSBP4-206ENST00000599699 TMED8Q6PL24 325 aaPredicted RBP34.21■■■■□ 3.07
SSBP4-206ENST00000599699 SH3BP5LQ7L8J4 393 aa34.21■■■■□ 3.07
SSBP4-206ENST00000599699 TSKSQ9UJT2 592 aa34.21■■■■□ 3.07
SSBP4-206ENST00000599699 DDTLA6NHG4 134 aaPredicted RBP34.2■■■■□ 3.07
SSBP4-206ENST00000599699 ZBTB48P10074 688 aaPredicted RBP34.2■■■■□ 3.07
SSBP4-206ENST00000599699 LBX1P52954 281 aa34.2■■■■□ 3.07
SSBP4-206ENST00000599699 DYNLL1P63167 89 aaKnown RBP34.2■■■■□ 3.07
SSBP4-206ENST00000599699 ANKRD45Q5TZF3 282 aa34.2■■■■□ 3.07
SSBP4-206ENST00000599699 GCC1Q96CN9 775 aa34.2■■■■□ 3.07
SSBP4-206ENST00000599699 RWDD1Q9H446 243 aaPredicted RBP34.2■■■■□ 3.07
SSBP4-206ENST00000599699 HSPA8P11142 646 aaKnown RBP34.19■■■■□ 3.06
SSBP4-206ENST00000599699 PDE6AP16499 860 aa34.19■■■■□ 3.06
SSBP4-206ENST00000599699 IRX6P78412 446 aaPredicted RBP34.19■■■■□ 3.06
SSBP4-206ENST00000599699 SREBF2Q12772 1141 aa34.19■■■■□ 3.06
SSBP4-206ENST00000599699 ZKSCAN4Q969J2 545 aaPredicted RBP34.19■■■■□ 3.06
SSBP4-206ENST00000599699 OSBPL5Q9H0X9 879 aaPredicted RBP34.19■■■■□ 3.06
SSBP4-206ENST00000599699 TSHZ3Q63HK5 1081 aa34.18■■■■□ 3.06
SSBP4-206ENST00000599699 TGFBRAP1Q8WUH2 860 aa34.18■■■■□ 3.06
SSBP4-206ENST00000599699 OPTNQ96CV9 577 aa34.18■■■■□ 3.06
SSBP4-206ENST00000599699 CERS3Q8IU89 383 aa34.17■■■■□ 3.06
SSBP4-206ENST00000599699 TRPA1O75762 1119 aa34.16■■■■□ 3.06
SSBP4-206ENST00000599699 MAPKAPK5Q8IW41 473 aa34.16■■■■□ 3.06
SSBP4-206ENST00000599699 DDX24Q9GZR7 859 aaKnown RBP eCLIP34.16■■■■□ 3.062e-7■■■□□ 17.8
SSBP4-206ENST00000599699 RNF186Q9NXI6 227 aa34.16■■■■□ 3.06
SSBP4-206ENST00000599699 OTOFQ9HC10 1997 aa34.16■■■■□ 3.06
SSBP4-206ENST00000599699 ZNF532Q9HCE3 1301 aa34.15■■■■□ 3.06
SSBP4-206ENST00000599699 MANSC4A6NHS7 340 aaPredicted RBP34.15■■■■□ 3.06
SSBP4-206ENST00000599699 INPP5BP32019 993 aa34.15■■■■□ 3.06
SSBP4-206ENST00000599699 GJA5P36382 358 aa34.15■■■■□ 3.06
SSBP4-206ENST00000599699 CNKSR2Q8WXI2 1034 aa34.15■■■■□ 3.06
SSBP4-206ENST00000599699 DOCK2Q92608 1830 aa34.15■■■■□ 3.06
SSBP4-206ENST00000599699 TM4SF4P48230 202 aa34.14■■■■□ 3.06
SSBP4-206ENST00000599699 OTUD5Q96G74 571 aa34.14■■■■□ 3.06
SSBP4-206ENST00000599699 SNCAIPQ9Y6H5 919 aa34.14■■■■□ 3.06
SSBP4-206ENST00000599699 ATRNL1Q5VV63 1379 aa34.13■■■■□ 3.05
SSBP4-206ENST00000599699 MAGEB6P1A0A0J9YX57 407 aa34.13■■■■□ 3.05
SSBP4-206ENST00000599699 SAGE1Q9NXZ1 904 aa34.13■■■■□ 3.05
SSBP4-206ENST00000599699 ZNF112Q9UJU3 913 aa34.13■■■■□ 3.05
SSBP4-206ENST00000599699 FLT1P17948 1338 aa34.12■■■■□ 3.05
SSBP4-206ENST00000599699 USP5P45974 858 aa34.12■■■■□ 3.05
SSBP4-206ENST00000599699 COL13A1Q5TAT6 717 aaPredicted RBP34.12■■■■□ 3.05
SSBP4-206ENST00000599699 OTUD7AQ8TE49 926 aaPredicted RBP34.12■■■■□ 3.05
SSBP4-206ENST00000599699 PRDM10Q9NQV6 1147 aa34.12■■■■□ 3.05
SSBP4-206ENST00000599699 TTC41PQ6P2S7 1318 aa34.11■■■■□ 3.05
SSBP4-206ENST00000599699 INHBEP58166 350 aa34.11■■■■□ 3.05
SSBP4-206ENST00000599699 ERO1BQ86YB8 467 aa34.11■■■■□ 3.05
SSBP4-206ENST00000599699 COL2A1P02458 1487 aaPredicted RBP34.1■■■■□ 3.05
SSBP4-206ENST00000599699 SPDYE5A6NIY4 337 aa34.1■■■■□ 3.05
SSBP4-206ENST00000599699 ERC2O15083 957 aa34.1■■■■□ 3.05
SSBP4-206ENST00000599699 SLURP2P0DP57 97 aa34.1■■■■□ 3.05
SSBP4-206ENST00000599699 DHX36Q9H2U1 1008 aaKnown RBP34.1■■■■□ 3.05
SSBP4-206ENST00000599699 XPO5Q9HAV4 1204 aaKnown RBP eCLIP34.1■■■■□ 3.05
SSBP4-206ENST00000599699 TCRBV5S4A2TA0A5A2 114 aa34.09■■■■□ 3.05
SSBP4-206ENST00000599699 MX1P20591 662 aa34.09■■■■□ 3.05
SSBP4-206ENST00000599699 ADD2P35612 726 aa34.09■■■■□ 3.05
SSBP4-206ENST00000599699 ZSCAN25Q6NSZ9 544 aa34.09■■■■□ 3.05
SSBP4-206ENST00000599699 SAP30BPQ9UHR5 308 aaKnown RBP34.09■■■■□ 3.05
SSBP4-206ENST00000599699 IGHDP01880 384 aa34.08■■■■□ 3.05
SSBP4-206ENST00000599699 MAP3K10Q02779 954 aa34.08■■■■□ 3.05
SSBP4-206ENST00000599699 B4GALNT3Q6L9W6 998 aa34.08■■■■□ 3.05
SSBP4-206ENST00000599699 RIOK1Q9BRS2 568 aaKnown RBP34.08■■■■□ 3.05
SSBP4-206ENST00000599699 PI4KBQ9UBF8 816 aa34.08■■■■□ 3.05
SSBP4-206ENST00000599699 FAM196BA6NMK8 535 aa34.07■■■■□ 3.04
SSBP4-206ENST00000599699 PHF20L1A8MW92 1017 aa34.07■■■■□ 3.04
SSBP4-206ENST00000599699 PALD1Q9ULE6 856 aa34.07■■■■□ 3.04
SSBP4-206ENST00000599699 TBC1D12O60347 775 aa34.06■■■■□ 3.04
SSBP4-206ENST00000599699 GLRX3O76003 335 aaKnown RBP34.06■■■■□ 3.04
SSBP4-206ENST00000599699 GTF2A2P52657 109 aa34.06■■■■□ 3.04
SSBP4-206ENST00000599699 SLFNL1Q499Z3 407 aa34.06■■■■□ 3.04
SSBP4-206ENST00000599699 NOL9Q5SY16 702 aaKnown RBP34.06■■■■□ 3.04
SSBP4-206ENST00000599699 TRIM34Q9BYJ4 488 aa34.06■■■■□ 3.04
SSBP4-206ENST00000599699 CRNKL1Q9BZJ0 848 aaKnown RBP34.06■■■■□ 3.04
SSBP4-206ENST00000599699 PICK1Q9NRD5 415 aa34.06■■■■□ 3.04
SSBP4-206ENST00000599699 HLA-DOAP06340 250 aa34.05■■■■□ 3.04
SSBP4-206ENST00000599699 SLC4A8Q2Y0W8 1093 aa34.05■■■■□ 3.04
SSBP4-206ENST00000599699 IFNL1Q8IU54 200 aa34.05■■■■□ 3.04
SSBP4-206ENST00000599699 SMC5Q8IY18 1101 aa34.05■■■■□ 3.04
SSBP4-206ENST00000599699 PPATQ06203 517 aa34.04■■■■□ 3.04
SSBP4-206ENST00000599699 PPIL2Q13356 520 aa34.04■■■■□ 3.04
SSBP4-206ENST00000599699 SCYL3Q8IZE3 742 aa34.04■■■■□ 3.04
SSBP4-206ENST00000599699 CRACR2BQ8N4Y2 399 aaPredicted RBP34.04■■■■□ 3.04
SSBP4-206ENST00000599699 KBTBD3Q8NAB2 608 aa34.04■■■■□ 3.04
SSBP4-206ENST00000599699 PI4K2BQ8TCG2 481 aa34.04■■■■□ 3.04
SSBP4-206ENST00000599699 LNPKQ9C0E8 428 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms