RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 PICALMQ13492 652 aa23.06■■□□□ 1.28
PNKP-213ENST00000599543 PI16Q6UXB8 463 aa23.06■■□□□ 1.28
PNKP-213ENST00000599543 KCNH4Q9UQ05 1017 aa23.06■■□□□ 1.28
PNKP-213ENST00000599543 GSTO1P78417 241 aa23.05■■□□□ 1.28
PNKP-213ENST00000599543 OS9Q13438 667 aaPredicted RBP23.05■■□□□ 1.28
PNKP-213ENST00000599543 KIF22Q14807 665 aa23.05■■□□□ 1.28
PNKP-213ENST00000599543 ITPRIPQ8IWB1 547 aa23.05■■□□□ 1.28
PNKP-213ENST00000599543 MAST2Q6P0Q8 1798 aa23.04■■□□□ 1.28
PNKP-213ENST00000599543 GPR75-ASB3A0A0A6YYF3 556 aa23.04■■□□□ 1.28
PNKP-213ENST00000599543 UQCRFS1P1P0C7P4 283 aa23.04■■□□□ 1.28
PNKP-213ENST00000599543 POLA2Q14181 598 aa23.04■■□□□ 1.28
PNKP-213ENST00000599543 ANKRD23Q86SG2 305 aa23.04■■□□□ 1.28
PNKP-213ENST00000599543 DDX4Q9NQI0 724 aaKnown RBP23.04■■□□□ 1.28
PNKP-213ENST00000599543 PICK1Q9NRD5 415 aa23.04■■□□□ 1.28
PNKP-213ENST00000599543 RAI14Q9P0K7 980 aa23.04■■□□□ 1.28
PNKP-213ENST00000599543 LDHCP07864 332 aa23.03■■□□□ 1.28
PNKP-213ENST00000599543 MCAMP43121 646 aa23.03■■□□□ 1.28
PNKP-213ENST00000599543 LACTBP83111 547 aaPredicted RBP23.03■■□□□ 1.28
PNKP-213ENST00000599543 TBC1D9Q6ZT07 1266 aa23.03■■□□□ 1.28
PNKP-213ENST00000599543 SH3BP5LQ7L8J4 393 aa23.03■■□□□ 1.28
PNKP-213ENST00000599543 SCYL3Q8IZE3 742 aa23.03■■□□□ 1.28
PNKP-213ENST00000599543 ARMC5Q96C12 935 aa23.03■■□□□ 1.28
PNKP-213ENST00000599543 NSUN4Q96CB9 384 aaKnown RBP23.03■■□□□ 1.28
PNKP-213ENST00000599543 C1orf115Q9H7X2 142 aa23.03■■□□□ 1.28
PNKP-213ENST00000599543 PTPRFP10586 1907 aa23.03■■□□□ 1.28
PNKP-213ENST00000599543 DDTLA6NHG4 134 aaPredicted RBP23.02■■□□□ 1.28
PNKP-213ENST00000599543 PHF20L1A8MW92 1017 aa23.02■■□□□ 1.28
PNKP-213ENST00000599543 PDHXO00330 501 aa23.02■■□□□ 1.28
PNKP-213ENST00000599543 SSH3Q8TE77 659 aa23.02■■□□□ 1.28
PNKP-213ENST00000599543 ZNF384Q8TF68 577 aa23.02■■□□□ 1.28
PNKP-213ENST00000599543 PHIPQ8WWQ0 1821 aa23.01■■□□□ 1.27
PNKP-213ENST00000599543 RHBDL3P58872 404 aa23.01■■□□□ 1.27
PNKP-213ENST00000599543 ATP8B2P98198 1209 aa23.01■■□□□ 1.27
PNKP-213ENST00000599543 SLC9C1Q4G0N8 1177 aa23.01■■□□□ 1.27
PNKP-213ENST00000599543 TNNI3KQ59H18 835 aa23.01■■□□□ 1.27
PNKP-213ENST00000599543 TTC39AQ5SRH9 613 aa23.01■■□□□ 1.27
PNKP-213ENST00000599543 GPR108Q9NPR9 543 aa23.01■■□□□ 1.27
PNKP-213ENST00000599543 LRP2BPQ9P2M1 347 aa23.01■■□□□ 1.27
PNKP-213ENST00000599543 RCAN3Q9UKA8 241 aa23.01■■□□□ 1.27
PNKP-213ENST00000599543 PTCH2Q9Y6C5 1203 aa23.01■■□□□ 1.27
PNKP-213ENST00000599543 FPGT-TNNI3KV9GXZ4 949 aa23.01■■□□□ 1.27
PNKP-213ENST00000599543 CXCL11O14625 94 aa23■■□□□ 1.27
PNKP-213ENST00000599543 SURF6O75683 361 aaKnown RBP23■■□□□ 1.27
PNKP-213ENST00000599543 MAP4K4O95819 1239 aaPredicted RBP23■■□□□ 1.27
PNKP-213ENST00000599543 CCDC158Q5M9N0 1113 aa23■■□□□ 1.27
PNKP-213ENST00000599543 NBPF11Q86T75 865 aa23■■□□□ 1.27
PNKP-213ENST00000599543 ARHGAP39Q9C0H5 1083 aa23■■□□□ 1.27
PNKP-213ENST00000599543 ZHX2Q9Y6X8 837 aa23■■□□□ 1.27
PNKP-213ENST00000599543 ATAD5Q96QE3 1844 aa23■■□□□ 1.27
PNKP-213ENST00000599543 MYO5AQ9Y4I1 1855 aaKnown RBP22.99■■□□□ 1.27
PNKP-213ENST00000599543 POTEFA5A3E0 1075 aa22.99■■□□□ 1.27
PNKP-213ENST00000599543 NPM3O75607 178 aaKnown RBP22.99■■□□□ 1.27
PNKP-213ENST00000599543 GNRH1P01148 92 aa22.99■■□□□ 1.27
PNKP-213ENST00000599543 PTPRAP18433 802 aa22.99■■□□□ 1.27
PNKP-213ENST00000599543 MAP3K10Q02779 954 aa22.99■■□□□ 1.27
PNKP-213ENST00000599543 MOGSQ13724 837 aa22.99■■□□□ 1.27
PNKP-213ENST00000599543 PRPF38BQ5VTL8 546 aaKnown RBP22.99■■□□□ 1.27
PNKP-213ENST00000599543 C17orf99Q6UX52 265 aa22.99■■□□□ 1.27
PNKP-213ENST00000599543 PARK7Q99497 189 aaKnown RBP22.99■■□□□ 1.27
PNKP-213ENST00000599543 CPA4Q9UI42 421 aa22.99■■□□□ 1.27
PNKP-213ENST00000599543 COL2A1P02458 1487 aaPredicted RBP22.98■■□□□ 1.27
PNKP-213ENST00000599543 CTNND1O60716 968 aaKnown RBP22.98■■□□□ 1.27
PNKP-213ENST00000599543 RLBP1P12271 317 aa22.98■■□□□ 1.27
PNKP-213ENST00000599543 ZNF333Q96JL9 665 aa22.98■■□□□ 1.27
PNKP-213ENST00000599543 DBNDD2Q9BQY9 259 aa22.98■■□□□ 1.27
PNKP-213ENST00000599543 NOL10Q9BSC4 688 aaKnown RBP22.98■■□□□ 1.27
PNKP-213ENST00000599543 MGAMO43451 1857 aa22.97■■□□□ 1.27
PNKP-213ENST00000599543 CDK5RAP2Q96SN8 1893 aa22.97■■□□□ 1.27
PNKP-213ENST00000599543 ZBTB7BO15156 539 aaPredicted RBP22.97■■□□□ 1.27
PNKP-213ENST00000599543 FASTKD5Q7L8L6 764 aaKnown RBP22.97■■□□□ 1.27
PNKP-213ENST00000599543 TMEM106CQ9BVX2 250 aa22.97■■□□□ 1.27
PNKP-213ENST00000599543 SNRKQ9NRH2 765 aa22.97■■□□□ 1.27
PNKP-213ENST00000599543 ADGRA2Q96PE1 1338 aa22.97■■□□□ 1.27
PNKP-213ENST00000599543 FOCADQ5VW36 1801 aa22.96■■□□□ 1.27
PNKP-213ENST00000599543 A0A0G2JLL6 359 aaPredicted RBP22.96■■□□□ 1.27
PNKP-213ENST00000599543 ECM2O94769 699 aaPredicted RBP22.96■■□□□ 1.27
PNKP-213ENST00000599543 SLURP2P0DP57 97 aa22.96■■□□□ 1.27
PNKP-213ENST00000599543 PRRT2Q7Z6L0 340 aaPredicted RBP22.96■■□□□ 1.27
PNKP-213ENST00000599543 TEX11Q8IYF3 940 aa22.96■■□□□ 1.27
PNKP-213ENST00000599543 OSBPL5Q9H0X9 879 aaPredicted RBP22.96■■□□□ 1.27
PNKP-213ENST00000599543 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.96■■□□□ 1.27
PNKP-213ENST00000599543 AFG3L2Q9Y4W6 797 aa22.96■■□□□ 1.27
PNKP-213ENST00000599543 TBC1D12O60347 775 aa22.95■■□□□ 1.26
PNKP-213ENST00000599543 PRMT2P55345 433 aa22.95■■□□□ 1.26
PNKP-213ENST00000599543 NAA16Q6N069 864 aaPredicted RBP22.95■■□□□ 1.26
PNKP-213ENST00000599543 GADL1Q6ZQY3 521 aa22.95■■□□□ 1.26
PNKP-213ENST00000599543 PANK1Q8TE04 598 aa22.95■■□□□ 1.26
PNKP-213ENST00000599543 NOP58Q9Y2X3 529 aaKnown RBP22.95■■□□□ 1.26
PNKP-213ENST00000599543 TRIM75PA6NK02 468 aa22.94■■□□□ 1.26
PNKP-213ENST00000599543 BAG3O95817 575 aa22.94■■□□□ 1.26
PNKP-213ENST00000599543 CYP2C8P10632 490 aa22.94■■□□□ 1.26
PNKP-213ENST00000599543 PSMC4P43686 418 aa22.94■■□□□ 1.26
PNKP-213ENST00000599543 GPAT2Q6NUI2 795 aa22.94■■□□□ 1.26
PNKP-213ENST00000599543 FAM196BA6NMK8 535 aa22.93■■□□□ 1.26
PNKP-213ENST00000599543 PLCG2P16885 1265 aa22.93■■□□□ 1.26
PNKP-213ENST00000599543 SH3RF3Q8TEJ3 882 aaPredicted RBP22.93■■□□□ 1.26
PNKP-213ENST00000599543 ZNF512BQ96KM6 892 aaPredicted RBP22.93■■□□□ 1.26
PNKP-213ENST00000599543 AATFQ9NY61 560 aaKnown RBP eCLIP22.93■■□□□ 1.26
PNKP-213ENST00000599543 FMNL1O95466 1100 aaPredicted RBP22.92■■□□□ 1.26
PNKP-213ENST00000599543 HOXD10P28358 340 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms